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Lsi02G010290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionvesicle-associated membrane protein 721-like
Genome locationchr02:10849118..10852310
RNA-Seq ExpressionLsi02G010290
SyntenyLsi02G010290
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsIPR001388 - Synaptobrevin
IPR042855 - v-SNARE, coiled-coil homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459063.1 PREDICTED: vesicle-associated membrane protein 722-like [Cucumis melo]1.2e-1998.28Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFK+SGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

XP_022142496.1 vesicle-associated membrane protein 722-like [Momordica charantia]5.3e-20100Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

XP_022927314.1 vesicle-associated membrane protein 722-like [Cucurbita moschata]5.3e-20100Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

XP_022955035.1 vesicle-associated membrane protein 721-like [Cucurbita moschata]1.2e-1998.28Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFK+SGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

XP_038894077.1 vesicle-associated membrane protein 722-like [Benincasa hispida]5.3e-20100Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

TrEMBL top hitse value%identityAlignment
A0A6J1CMC8 vesicle-associated membrane protein 722-like2.6e-20100Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

A0A6J1EHP2 vesicle-associated membrane protein 722-like2.6e-20100Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

A0A6J1GU17 vesicle-associated membrane protein 721-like5.7e-2098.28Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFK+SGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

A0A6J1K2K4 vesicle-associated membrane protein 721-like5.7e-2098.28Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFK+SGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

A0A6J1KR02 vesicle-associated membrane protein 722-like2.6e-20100Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

SwissProt top hitse value%identityAlignment
O23429 Vesicle-associated membrane protein 7243.5e-1463.79Show/hide
Query:  LDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIF
        +DRGE + +L DKTENL +QAQ++K  GT++RRK+W QNMKIKL+VLGIL+ L+LII+
Subjt:  LDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIF

O48850 Vesicle-associated membrane protein 7251.0e-1884.48Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF++ GTKIRRKMW +NMKIKLIVLGI+I LILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

P47192 Vesicle-associated membrane protein 7225.2e-1882.76Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF++ GT++RRKMW QNMKIKLIVL I+IALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

Q9MAS5 Putative vesicle-associated membrane protein 7261.5e-1777.59Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF++ GTK++RK+W +NMKIKLIV GI++ALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

Q9ZTW3 Vesicle-associated membrane protein 7211.4e-1884.48Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF+++GT++RRKMWLQNMKIKLIVL I+IALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

Arabidopsis top hitse value%identityAlignment
AT1G04750.1 vesicle-associated membrane protein 7219.6e-2084.48Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF+++GT++RRKMWLQNMKIKLIVL I+IALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

AT1G04750.2 vesicle-associated membrane protein 7219.6e-2084.48Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF+++GT++RRKMWLQNMKIKLIVL I+IALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

AT2G32670.1 vesicle-associated membrane protein 7257.4e-2084.48Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF++ GTKIRRKMW +NMKIKLIVLGI+I LILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

AT2G33120.1 synaptobrevin-related protein 13.7e-1982.76Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF++ GT++RRKMW QNMKIKLIVL I+IALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII

AT2G33120.2 synaptobrevin-related protein 13.7e-1982.76Show/hide
Query:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII
        VLDRGEKIELLVDKTENL +QAQDF++ GT++RRKMW QNMKIKLIVL I+IALILII
Subjt:  VLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGATTCTCATCTTGTCGTTTAGCTCTCAATTGGTGTATCATGTGTAAGCATGCTTATGAAGATCATAGTCACCTCTTCCCCACTGTTATTTTACTGGCATTAAT
TGGAGTTTTCTATGTTTGGGATCTTGTGGTTCTTGATAGAGGAGAGAAGATAGAACTTCTAGTGGATAAGACAGAAAACCTTCATAACCAGGCACAAGACTTCAAGAGTA
GTGGAACAAAAATTCGAAGGAAAATGTGGCTACAAAATATGAAGATCAAGTTGATCGTTTTGGGGATTTTGATAGCATTGATCCTTATCATATTTGCCGTGGGTTCAACT
GTGGTGGAAAATGAACACTTTCTCAAGGAGGAACCTCACAGCGAAATCTTTTGGCATGATGATATTTTGAGAGGGATAAGTGATATACATGATTTGGCTATGTATGTAGT
AAACGTTAAACACAGTGCAGAATATCTGTTTTGTTTAAAGCTAAATTTACGTGTGAATGATAACCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCGATTCTCATCTTGTCGTTTAGCTCTCAATTGGTGTATCATGTGTAAGCATGCTTATGAAGATCATAGTCACCTCTTCCCCACTGTTATTTTACTGGCATTAAT
TGGAGTTTTCTATGTTTGGGATCTTGTGGTTCTTGATAGAGGAGAGAAGATAGAACTTCTAGTGGATAAGACAGAAAACCTTCATAACCAGGCACAAGACTTCAAGAGTA
GTGGAACAAAAATTCGAAGGAAAATGTGGCTACAAAATATGAAGATCAAGTTGATCGTTTTGGGGATTTTGATAGCATTGATCCTTATCATATTTGCCGTGGGTTCAACT
GTGGTGGAAAATGAACACTTTCTCAAGGAGGAACCTCACAGCGAAATCTTTTGGCATGATGATATTTTGAGAGGGATAAGTGATATACATGATTTGGCTATGTATGTAGT
AAACGTTAAACACAGTGCAGAATATCTGTTTTGTTTAAAGCTAAATTTACGTGTGAATGATAACCTATAA
Protein sequenceShow/hide protein sequence
MVRFSSCRLALNWCIMCKHAYEDHSHLFPTVILLALIGVFYVWDLVVLDRGEKIELLVDKTENLHNQAQDFKSSGTKIRRKMWLQNMKIKLIVLGILIALILIIFAVGST
VVENEHFLKEEPHSEIFWHDDILRGISDIHDLAMYVVNVKHSAEYLFCLKLNLRVNDNL