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Lsi02G010310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPeptidylprolyl isomerase
Genome locationchr02:10868696..10871388
RNA-Seq ExpressionLsi02G010310
SyntenyLsi02G010310
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domainsIPR001179 - FKBP-type peptidyl-prolyl cis-trans isomerase domain
IPR044197 - Peptidyl-prolyl cis-trans isomerase FKBP17-1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043248.1 peptidyl-prolyl cis-trans isomerase FKBP17-1 [Cucumis melo var. makuwa]1.5e-1776.19Show/hide
Query:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        PFF+       I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
KAG7019423.1 Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-1895.65Show/hide
Query:  INVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        INVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEP+PF FVLGSGKV
Subjt:  INVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
TYK29312.1 peptidyl-prolyl cis-trans isomerase FKBP17-1 [Cucumis melo var. makuwa]1.5e-1776.19Show/hide
Query:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        PFF+       I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
XP_008459060.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic-like isoform X1 [Cucumis melo]2.5e-1786.54Show/hide
Query:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
XP_008459062.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic-like isoform X3 [Cucumis melo]2.5e-1786.54Show/hide
Query:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
TrEMBL top hitse value%identityAlignment
A0A1S3C9F0 Peptidylprolyl isomerase1.2e-1786.54Show/hide
Query:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
A0A1S3C9V7 Peptidylprolyl isomerase1.2e-1786.54Show/hide
Query:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
A0A5A7TKB7 Peptidylprolyl isomerase7.2e-1876.19Show/hide
Query:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        PFF+       I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
A0A5D3E097 Peptidylprolyl isomerase7.2e-1876.19Show/hide
Query:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        PFF+       I   R I+VKV VHYYGRLAAKQGWRFDTTYDHKDENGEPLPF FVLGSGKV
Subjt:  PFFI-------ILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
A0A6J1KH10 Peptidylprolyl isomerase5.2e-1693.02Show/hide
Query:  KVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        +VAVHYYGRLAAKQGWRFDTTYDHKDENGEP+PF FVLGSGKV
Subjt:  KVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
SwissProt top hitse value%identityAlignment
O81864 Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic5.5e-1576.74Show/hide
Query:  KVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        ++ +HYYGRLAAKQGWRFD+TYDHKD NGE +PF FVLGS KV
Subjt:  KVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
Arabidopsis top hitse value%identityAlignment
AT4G19830.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein3.9e-1676.74Show/hide
Query:  KVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV
        ++ +HYYGRLAAKQGWRFD+TYDHKD NGE +PF FVLGS KV
Subjt:  KVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATCTTGTGTTTTCATCGCCTTCGTTAAGGCAATCATTTTTGGATTTTTTTTGTCCACTTCTGACTTCTATGTTGTTCAAGTTACAAACAATGGACACCCCTT
TTTCATCATTTTATCATGCCGATATATTAACGTGAAGGTTGCAGTTCATTATTATGGAAGGTTAGCAGCAAAGCAGGGATGGCGCTTTGACACAACATATGATCACAAAG
ATGAAAATGGGGAGCCCCTTCCTTTCATATTTGTTCTTGGCTCTGGGAAAGTAAGTCAATTGTTGTTGATATCCTACCATTCTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATTATTTCCTCTCCCTTCCACCTTCTATTTCATGTCTTTCGAATCCCATTATCCTCTCCTTCCTGTAATTTCTCCACCCACTAGAAGGTCTCTCTCTCTGCACTTATCTC
CACCGCCATTTCAACCTTCCTCTCCTCCTCTCTCGTCACTCCTTCCAAATCTGTCGCACCGAATTTCTTCCAGCTCCGGGACTCGGTCGGCGTCAAGGCGTTGGAGCTTC
GCATTGGCTCAGGGGAAACCCCCCTCGACGGAGACCAGGTCGTAATTTTATGGAGGAATCTTGTGTTTTCATCGCCTTCGTTAAGGCAATCATTTTTGGATTTTTTTTGT
CCACTTCTGACTTCTATGTTGTTCAAGTTACAAACAATGGACACCCCTTTTTCATCATTTTATCATGCCGATATATTAACGTGAAGGTTGCAGTTCATTATTATGGAAGG
TTAGCAGCAAAGCAGGGATGGCGCTTTGACACAACATATGATCACAAAGATGAAAATGGGGAGCCCCTTCCTTTCATATTTGTTCTTGGCTCTGGGAAAGTAAGTCAATT
GTTGTTGATATCCTACCATTCTACCTAA
Protein sequenceShow/hide protein sequence
MEESCVFIAFVKAIIFGFFLSTSDFYVVQVTNNGHPFFIILSCRYINVKVAVHYYGRLAAKQGWRFDTTYDHKDENGEPLPFIFVLGSGKVSQLLLISYHST