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Lsi02G010360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLipid transfer protein
Genome locationchr02:10983066..10983359
RNA-Seq ExpressionLsi02G010360
SyntenyLsi02G010360
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648143.1 hypothetical protein Csa_023893, partial [Cucumis sativus]4.0e-2054.22Show/hide
Query:  VVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        +++ V V E Q A A  C+PNE+R C+ A+T S  PSS+CC+ V++HR CYC YKKNP  Q YLQ   TK+II+QCG+ +PSC
Subjt:  VVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

KAE8648147.1 hypothetical protein Csa_023900, partial [Cucumis sativus]3.4e-1958.9Show/hide
Query:  QSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        Q A A  C+PNE+R C+ A+T S  PSS+CC+ V++HR CYC YKKNP  Q YLQ   TK+IISQCG+ +PSC
Subjt:  QSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

KGN66906.1 hypothetical protein Csa_006987 [Cucumis sativus]2.0e-2767.03Show/hide
Query:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        M+G+ LL+VV    +NE Q ++AVKC+P ELRPC L+FTMS+EPSS CC KV +HR CYC Y KNPK QPYL+YDAT+RIIS CGVAIP+C
Subjt:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

XP_022759945.1 non-specific lipid-transfer protein 2-like [Durio zibethinus]7.5e-1947.37Show/hide
Query:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        K FS    C   +V+++   E ++AEAV C+P++L PCL A T S  PS+TCC+K+KE +PC+CGY KNP I+ ++    +KR+ S CGVA P C
Subjt:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

XP_022759947.1 non-specific lipid-transfer protein 2-like [Durio zibethinus]2.2e-1846.32Show/hide
Query:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        K FS    C   +V+++   E ++ EAV C+P++L PCL A T S  PS+TCC+K+KE +PC+CGY KNP I+ ++    +KR+ S CGVA P C
Subjt:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

TrEMBL top hitse value%identityAlignment
A0A0A0M3W7 AAI domain-containing protein9.5e-2867.03Show/hide
Query:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        M+G+ LL+VV    +NE Q ++AVKC+P ELRPC L+FTMS+EPSS CC KV +HR CYC Y KNPK QPYL+YDAT+RIIS CGVAIP+C
Subjt:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

A0A2Z6NR57 AAI domain-containing protein5.2e-1847.87Show/hide
Query:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        M  MK +C ++++++++V      EAV C P ELRPCL A T +  PS+ CCNK+KE  PC CGY KNP + PY+     KR+ S CGVA P C
Subjt:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

A0A6P6A4M9 non-specific lipid-transfer protein 2-like8.9e-1845.45Show/hide
Query:  MKKM--FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        MK M  FS    C + +V+++   E ++AEAV C+ ++L PCL A T S  PS+TCC+K+KE +PC+CGY KNP ++ ++    +KR+ S CGVA P C
Subjt:  MKKM--FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

A0A6P6A579 non-specific lipid-transfer protein 2-like1.1e-1846.32Show/hide
Query:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        K FS    C   +V+++   E ++ EAV C+P++L PCL A T S  PS+TCC+K+KE +PC+CGY KNP I+ ++    +KR+ S CGVA P C
Subjt:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

A0A6P6A5B6 non-specific lipid-transfer protein 2-like3.6e-1947.37Show/hide
Query:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        K FS    C   +V+++   E ++AEAV C+P++L PCL A T S  PS+TCC+K+KE +PC+CGY KNP I+ ++    +KR+ S CGVA P C
Subjt:  KMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 28.9e-0726.14Show/hide
Query:  LLLVVMMVIV--NEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        L+L V MV      +       C   +L  C  A      P++ CC+ ++  + C+C + K+P+   Y+     ++ +S CG+A+P+C
Subjt:  LLLVVMMVIV--NEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

P82353 Non-specific lipid-transfer protein 21.1e-1241.18Show/hide
Query:  VKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        V C P +L PCL          +TCC K++E RPC CGY KNP ++ Y+     +++ S CGV +P C
Subjt:  VKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

P86809 Non-specific lipid-transfer protein 21.4e-1244.44Show/hide
Query:  CEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAI
        C   +L PCL A T +  PS+ CCNK+KE +PC CGY K+P ++ Y+     ++  S CGVA+
Subjt:  CEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAI

Q43681 Probable non-specific lipid-transfer protein AKCS91.9e-1741.24Show/hide
Query:  MKKMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        MK    M  +C ++VV + +++    AEAV C P EL  C+ A T   +PSSTCC+K+K   PC C Y KNP ++ Y+     K+++S CGV  P+C
Subjt:  MKKMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

Arabidopsis top hitse value%identityAlignment
AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.7e-1135.9Show/hide
Query:  IVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        IV      + V C   EL+PCL +     +PS+ CC K+KE   C+C Y +NP+   Y+   A K+I++ C +  P+C
Subjt:  IVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.8e-1331.91Show/hide
Query:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        M  +  + +L +   +++  +  AE V C P +L  C  A T S  PS  CC K++E +PC CGY +NP ++ Y+     +++ + C +  PSC
Subjt:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.2e-1232.35Show/hide
Query:  MKGMCLLLVVMMVIVNEMQSA-----------EAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIP
        MK + L+LVV +++     +A             V C+  +L+PCL A T   +PS  CC K+ E + C CG+ KNP    Y+     ++++  C VA P
Subjt:  MKGMCLLLVVMMVIVNEMQSA-----------EAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIP

Query:  SC
        +C
Subjt:  SC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-1438.04Show/hide
Query:  SMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        +M  +  L  V+++I+    +AEAV C P +L PC  A T S  PS+ CC K+KE RPC CGY +NP ++ ++     +++   C + IP C
Subjt:  SMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC

AT5G38195.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.5e-1231.58Show/hide
Query:  MKGMCLLLVVMMVIVNE----MQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC
        MK M L+++ ++++V      ++S  +  C P EL PCL A T   +P+  CC+K+ E + C CGY  NP    ++     ++++  C +  PSC
Subjt:  MKGMCLLLVVMMVIVNE----MQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAATGTTTTCAATGAAAGGCATGTGCCTTTTGTTGGTCGTGATGATGGTGATTGTCAATGAAATGCAATCGGCGGAGGCAGTGAAATGCGAGCCAAATGAATT
GAGACCATGTCTTTTGGCGTTCACAATGTCGGTGGAGCCATCTTCAACTTGTTGCAATAAAGTGAAGGAACACAGACCATGCTATTGTGGATACAAGAAAAATCCAAAGA
TTCAGCCCTATTTACAATATGATGCAACAAAAAGAATCATTTCTCAATGCGGAGTTGCCATCCCAAGTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAATGTTTTCAATGAAAGGCATGTGCCTTTTGTTGGTCGTGATGATGGTGATTGTCAATGAAATGCAATCGGCGGAGGCAGTGAAATGCGAGCCAAATGAATT
GAGACCATGTCTTTTGGCGTTCACAATGTCGGTGGAGCCATCTTCAACTTGTTGCAATAAAGTGAAGGAACACAGACCATGCTATTGTGGATACAAGAAAAATCCAAAGA
TTCAGCCCTATTTACAATATGATGCAACAAAAAGAATCATTTCTCAATGCGGAGTTGCCATCCCAAGTTGCTAA
Protein sequenceShow/hide protein sequence
MKKMFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTMSVEPSSTCCNKVKEHRPCYCGYKKNPKIQPYLQYDATKRIISQCGVAIPSC