; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G010400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnon-specific lipid-transfer protein 2-like
Genome locationchr02:11053391..11053681
RNA-Seq ExpressionLsi02G010400
SyntenyLsi02G010400
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP85330.1 probable non-specific lipid-transfer protein akcs9 [Phtheirospermum japonicum]1.7e-1548.24Show/hide
Query:  LLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKER-PCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        L+ V+V+LV E Q    V C+  EL PC  A   SG PS+ CC+K++E+ PC+CGY++NP +KPY++  + K + A CGVSIP+C
Subjt:  LLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKER-PCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

KAE9449479.1 hypothetical protein C3L33_18628, partial [Rhododendron williamsianum]5.5e-1446.43Show/hide
Query:  LVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        LVV+VV++ E +  + V C+  ELRPC  AF     PS+ CCDKV+E +PC CGY+KNP +K ++   + + + A CGV  PTC
Subjt:  LVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

KAG5527978.1 hypothetical protein RHGRI_028792 [Rhododendron griersonianum]5.5e-1446.43Show/hide
Query:  LVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        LVV+VV++ E +  + V C+  ELRPC  AF     PS+ CCDKV+E +PC CGY+KNP +K ++   + + + A CGV  PTC
Subjt:  LVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

KAG8373754.1 hypothetical protein BUALT_Bualt11G0058000 [Buddleja alternifolia]2.5e-1444.19Show/hide
Query:  FLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        FL+ ++VVLV E      V C+   L PC  A   S +PS+ CC K++E +PC+CGYMKNP +KPY++  + K + A CG++ P C
Subjt:  FLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

KGN66906.1 hypothetical protein Csa_006987 [Cucumis sativus]2.7e-2160.98Show/hide
Query:  VIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKV-KERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        ++VV++NETQ  + VKCD  ELRPC L+F MS EPSSACC KV + R CYC Y KNPK +PYL+YD  + +I+ CGV+IPTC
Subjt:  VIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKV-KERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

TrEMBL top hitse value%identityAlignment
A0A0A0M3W7 AAI domain-containing protein1.3e-2160.98Show/hide
Query:  VIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKV-KERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        ++VV++NETQ  + VKCD  ELRPC L+F MS EPSSACC KV + R CYC Y KNPK +PYL+YD  + +I+ CGV+IPTC
Subjt:  VIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKV-KERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

A0A5C7IL66 AAI domain-containing protein7.7e-1441.24Show/hide
Query:  MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        MK    +  L  ++V++VVL +E +  + V C+  EL PC  A   S  PSS CC KV+E RPC CGY+K+P +K Y+   + + +++ CGVS P C
Subjt:  MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

A0A5C7ILK8 AAI domain-containing protein3.5e-1441.24Show/hide
Query:  MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        MK+   +  L  ++V++VVL +E +  + V C+  EL PC  A   S  PSS CC KV+E RPC CGY+K+P +K Y+   + + +++ CGVS P C
Subjt:  MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

A0A6A4L2T0 AAI domain-containing protein (Fragment)2.7e-1446.43Show/hide
Query:  LVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        LVV+VV++ E +  + V C+  ELRPC  AF     PS+ CCDKV+E +PC CGY+KNP +K ++   + + + A CGV  PTC
Subjt:  LVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

A0A6P6A579 non-specific lipid-transfer protein 2-like5.9e-1443.37Show/hide
Query:  VVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        +V+++   ET+ V+ V CD  +L PC  A   S  PS+ CC K+KE +PC+CGY+KNP IK +++  D+K + + CGV+ P C
Subjt:  VVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

SwissProt top hitse value%identityAlignment
P82353 Non-specific lipid-transfer protein 23.8e-1043.48Show/hide
Query:  VKCDSKELRPCRLAFRMSGEPS-SACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        V C   +L PC L    SG PS + CC K++E RPC CGY+KNP ++ Y+   + + L + CGV +P C
Subjt:  VKCDSKELRPCRLAFRMSGEPS-SACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

P86809 Non-specific lipid-transfer protein 28.5e-1039.68Show/hide
Query:  CDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSI
        C + +L PC  A   +  PS+ACC+K+KE +PC CGY+K+P +K Y+     +   + CGV++
Subjt:  CDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSI

Q43681 Probable non-specific lipid-transfer protein AKCS99.1e-1234.02Show/hide
Query:  MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVK-ERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        MK  + ++ +  ++VV + L++     + V C+  EL  C  A     +PSS CC K+K + PC C Y+KNP +K Y+     K +++ CGV+ P C
Subjt:  MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVK-ERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

Arabidopsis top hitse value%identityAlignment
AT1G07747.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.8e-0831.52Show/hide
Query:  LRFLLVVIVVLV----NETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        ++F  +V V  V      T+  +   C   +L+ C         PS+ CC K+K+ + C+C Y+KNP I PY+     K ++  CGV +P C
Subjt:  LRFLLVVIVVLV----NETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.4e-0930.3Show/hide
Query:  KFVSLNGLRFLLVVIVV----LVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKER-PCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        KF +L  + F+L ++      +V  +   + V C   EL+PC  +     +PS+ CC+K+KE+  C+C Y++NP+   Y+     K ++A C +  P C
Subjt:  KFVSLNGLRFLLVVIVV----LVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKER-PCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.8e-1031.76Show/hide
Query:  LLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        L +   +L+      + V C   +L  C  A   S  PS ACC K++E +PC CGYM+NP ++ Y+   + + +   C +  P+C
Subjt:  LLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.4e-1236.56Show/hide
Query:  VSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        VSL  L  +L++I+    E      V C   +L PC  A   S  PS+ CC K+KE RPC CGYM+NP ++ ++   + + +   C + IP C
Subjt:  VSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.9e-1139.71Show/hide
Query:  VKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC
        V CD+ +L  C         PS+ CC K+KE +PC+C Y+K+P+   Y+   + K  +A CGV  PTC
Subjt:  VKCDSKELRPCRLAFRMSGEPSSACCDKVKE-RPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATTTGTTTCTTTGAATGGTCTGCGCTTTTTGTTGGTTGTGATTGTGGTGCTTGTCAATGAAACTCAACATGTGCAGCCAGTGAAATGCGACTCAAAAGAACT
GAGACCATGTCGTTTGGCCTTCCGAATGTCAGGGGAGCCATCATCAGCTTGTTGCGACAAGGTGAAGGAGAGACCATGCTATTGTGGATACATGAAAAATCCAAAGATTA
AACCCTATTTAGAGTATGATGACAACAAAGATCTCATTGCTCAATGTGGCGTTTCCATTCCAACTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATTTGTTTCTTTGAATGGTCTGCGCTTTTTGTTGGTTGTGATTGTGGTGCTTGTCAATGAAACTCAACATGTGCAGCCAGTGAAATGCGACTCAAAAGAACT
GAGACCATGTCGTTTGGCCTTCCGAATGTCAGGGGAGCCATCATCAGCTTGTTGCGACAAGGTGAAGGAGAGACCATGCTATTGTGGATACATGAAAAATCCAAAGATTA
AACCCTATTTAGAGTATGATGACAACAAAGATCTCATTGCTCAATGTGGCGTTTCCATTCCAACTTGTTAA
Protein sequenceShow/hide protein sequence
MKKFVSLNGLRFLLVVIVVLVNETQHVQPVKCDSKELRPCRLAFRMSGEPSSACCDKVKERPCYCGYMKNPKIKPYLEYDDNKDLIAQCGVSIPTC