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Lsi02G010740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionANK_REP_REGION domain-containing protein
Genome locationchr02:11910974..11911541
RNA-Seq ExpressionLsi02G010740
SyntenyLsi02G010740
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653646.1 hypothetical protein Csa_007664 [Cucumis sativus]1.3e-5669.94Show/hide
Query:  MTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLHEAATVGNLA
        MTR CYRAVIKE+WKKAAEEFT EEEV S L+FP+ S ND ALHLA YSG EEPTRTLLL+A KLE E      E EE FWKNN GNT LHEAAT+GNLA
Subjt:  MTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLHEAATVGNLA

Query:  AVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
        AVKL +  +      K I  ET LYRAAK+GQ  IV+Y LD+CED Y+RSP NWTAG DD+PIIHAAIQSENF
Subjt:  AVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

KAE8653647.1 hypothetical protein Csa_007370 [Cucumis sativus]2.3e-5364.77Show/hide
Query:  VFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEED-----FWKNNVGNTLLHEAATVG
        +F MTR  YRA+IKE+WKKAAEEFTKE+E+ S LKFPM +  D A HLA YSG EEPTRTLLL+A K E E ++EE+     FWKN  GNT LHEAA +G
Subjt:  VFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEED-----FWKNNVGNTLLHEAATVG

Query:  NLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
        NLAAVKL +  +      K I  ET LYRAAK+GQ  IV+Y LD+CEDLY+RSP NWTAG  D+PIIHAAIQSENF
Subjt:  NLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

XP_031736168.1 uncharacterized protein LOC105434529 isoform X1 [Cucumis sativus]2.5e-6070.33Show/hide
Query:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLH
        ME KRG+FKMTR CYRAVIKE+WKKAAEEFT EEEV S L+FP+ S ND ALHLA YSG EEPTRTLLL+A KLE E      E EE FWKNN GNT LH
Subjt:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLH

Query:  EAATVGNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
        EAAT+GNLAAVKL +  +      K I  ET LYRAAK+GQ  IV+Y LD+CED Y+RSP NWTAG DD+PIIHAAIQSENF
Subjt:  EAATVGNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

XP_031736172.1 uncharacterized protein LOC105434529 isoform X2 [Cucumis sativus]6.9e-5869.66Show/hide
Query:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLH
        ME KRG+FKMTR CYRAVIKE+WKKAAEEFT EEEV S L+FP+ S ND ALHLA YSG EEPTRTLLL+A KLE E      E EE FWKNN GNT LH
Subjt:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLH

Query:  EAATVGNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQ
        EAAT+GNLAAVKL +  +      K I  ET LYRAAK+GQ  IV+Y LD+CED Y+RSP NWTAG DD+PIIHAAIQ
Subjt:  EAATVGNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQ

XP_031736173.1 uncharacterized protein LOC105434529 isoform X3 [Cucumis sativus]2.5e-6070.33Show/hide
Query:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLH
        ME KRG+FKMTR CYRAVIKE+WKKAAEEFT EEEV S L+FP+ S ND ALHLA YSG EEPTRTLLL+A KLE E      E EE FWKNN GNT LH
Subjt:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEME-----GEMEEDFWKNNVGNTLLH

Query:  EAATVGNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
        EAAT+GNLAAVKL +  +      K I  ET LYRAAK+GQ  IV+Y LD+CED Y+RSP NWTAG DD+PIIHAAIQSENF
Subjt:  EAATVGNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

TrEMBL top hitse value%identityAlignment
A0A0A0LY91 ANK_REP_REGION domain-containing protein2.9e-5465.34Show/hide
Query:  VFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEED-----FWKNNVGNTLLHEAATVG
        +F MTR  YRA+IKE+WKKAAEEFTKE+E+ S LKFPM +  D A HLA YSG EEPTRTLLL+A K E E ++EE+     FWKN  GNT LHEAAT+G
Subjt:  VFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEED-----FWKNNVGNTLLHEAATVG

Query:  NLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
        NLAAVKL +  +      K I  ET LYRAAK+GQ  IV+Y LD+CEDLY+RSP NWTAG  D+PIIHAAIQSENF
Subjt:  NLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

A0A0A0M0P3 ANK_REP_REGION domain-containing protein6.3e-4962.71Show/hide
Query:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATV
        ME KRG+FKMTR CYRAVIKE+WKKAAEEFT EEEV S L+FP+ S ND AL LA  S                    E EE FWKNN GNT LHEAAT+
Subjt:  MEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATV

Query:  GNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
        GNLAAVKL +  +      K I  ET LYRAAK+GQ  IV+Y LD+CED Y+RSP NWTAG DD+PIIHAAIQSENF
Subjt:  GNLAAVKLWLNSR------KGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

A0A0A0M3P4 ANK_REP_REGION domain-containing protein3.0e-3555.21Show/hide
Query:  YRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVKLWLNSRK
        YRAVIKEEWKK  EE   E ++     FPM ++ D ALHLAVYSG EEP RTLL+         EM+E FW+N+ GNT LHEAATVGNLAAVKL +  +K
Subjt:  YRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVKLWLNSRK

Query:  ------GICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
               I  ET L+RAA+ G L+IV Y L+DCED +SR   +WT     +PIIHAAIQS+ F
Subjt:  ------GICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

A0A6J1CMX0 uncharacterized protein LOC1110127375.0e-3855.83Show/hide
Query:  YRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVKLWLNSRK
        Y+ VIKEEWK   +E   +  +     FPM ++ D ALHLAVYSG EEPTR LL          E++E+FWKN  GNT LHEAA VGNLAAVKL +   K
Subjt:  YRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVKLWLNSRK

Query:  ------GICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
               I  ET L+RAA++G L IV+YFL+DCED +SRSPINWT G    PIIHAAIQSE F
Subjt:  ------GICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

A0A6J1FII8 uncharacterized protein LOC1114460495.2e-3550.59Show/hide
Query:  FKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVK
        F + R  Y+AVIKEEWK   EE  +E ++     FPM ++ D ALHLAVYSG E+P ++LL           + +DFW+N+ GNT LHEAAT+GNLAAVK
Subjt:  FKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVK

Query:  LWLNSRK------GICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF
        L ++  K       I  ET L+RAA+ G LDIVK+ L+DC+D  SRSP NWT   ++ PIIHA IQS+ F
Subjt:  LWLNSRK------GICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF

SwissProt top hitse value%identityAlignment
Q69ZU8 Ankyrin repeat domain-containing protein 62.7e-0434.04Show/hide
Query:  ALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVKLWLNS-----RKGICWETRLYRAAKYGQLDIVKYFLD
        ALHLA  +   + TR LLL   + ++         KNN G+T LH AA   +L+ V+L LN+      K    +T L+ AA      +VK  L+
Subjt:  ALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATVGNLAAVKLWLNS-----RKGICWETRLYRAAKYGQLDIVKYFLD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGTAGAAAGAAGAAAAAGAAGAAAATGGAAGGTAAAAGGGGGGTTTTCAAGATGACAAGAAAGTGTTATAGAGCAGTAATTAAAGAAGAATGGAAGAAGGCGGC
TGAGGAATTTACTAAGGAAGAAGAAGTGGCCTCAAACTTAAAGTTTCCGATGATGAGCAACAACGACAAGGCGTTGCATCTGGCGGTATACAGCGGGGTGGAAGAGCCGA
CGAGGACATTATTATTGGTGGCGAAAAAATTGGAAATGGAAGGAGAAATGGAAGAAGATTTTTGGAAGAACAACGTGGGAAACACGCTGCTGCATGAGGCGGCGACGGTG
GGGAACTTGGCGGCCGTTAAGCTTTGGTTGAATTCAAGAAAAGGGATATGTTGGGAAACGCGGTTGTATAGAGCTGCTAAATATGGACAGCTTGACATTGTTAAGTACTT
TTTGGATGATTGTGAAGATTTGTATTCTCGTTCTCCTATTAATTGGACTGCTGGCTTCGATGATTCTCCCATCATTCATGCTGCCATTCAAAGCGAGAATTTT
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGTAGAAAGAAGAAAAAGAAGAAAATGGAAGGTAAAAGGGGGGTTTTCAAGATGACAAGAAAGTGTTATAGAGCAGTAATTAAAGAAGAATGGAAGAAGGCGGC
TGAGGAATTTACTAAGGAAGAAGAAGTGGCCTCAAACTTAAAGTTTCCGATGATGAGCAACAACGACAAGGCGTTGCATCTGGCGGTATACAGCGGGGTGGAAGAGCCGA
CGAGGACATTATTATTGGTGGCGAAAAAATTGGAAATGGAAGGAGAAATGGAAGAAGATTTTTGGAAGAACAACGTGGGAAACACGCTGCTGCATGAGGCGGCGACGGTG
GGGAACTTGGCGGCCGTTAAGCTTTGGTTGAATTCAAGAAAAGGGATATGTTGGGAAACGCGGTTGTATAGAGCTGCTAAATATGGACAGCTTGACATTGTTAAGTACTT
TTTGGATGATTGTGAAGATTTGTATTCTCGTTCTCCTATTAATTGGACTGCTGGCTTCGATGATTCTCCCATCATTCATGCTGCCATTCAAAGCGAGAATTTT
Protein sequenceShow/hide protein sequence
MKGRKKKKKKMEGKRGVFKMTRKCYRAVIKEEWKKAAEEFTKEEEVASNLKFPMMSNNDKALHLAVYSGVEEPTRTLLLVAKKLEMEGEMEEDFWKNNVGNTLLHEAATV
GNLAAVKLWLNSRKGICWETRLYRAAKYGQLDIVKYFLDDCEDLYSRSPINWTAGFDDSPIIHAAIQSENF