; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G010880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:12281607..12282200
RNA-Seq ExpressionLsi02G010880
SyntenyLsi02G010880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652887.1 hypothetical protein Csa_017671 [Cucumis sativus]1.4e-8083.84Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSN+FT V NSSSHR KA HQK   AA GG DHPPAFSC CF+CYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN
        RWDSSPNRQLIHEIIDAYEEKLAESK GKNNKKERKK+N+ G VSGPGEGKGSE A KEEE RVTE+E AE GEE AEKG VRRIVS +GE+IWG WN
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN

KAG7019402.1 hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-8384.08Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN SSHR KAAHQKP  AAK GSDHPP FSCDCFRCYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGW
        RWDSSPNRQ+IHEIIDAYEE LAESK+GKNNKKERKK+N    SGSVS PG+GKGSE A K EESRVTE E A+ GE EAEKGSVR IVS+IGE+IWGGW
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGW

Query:  N
        N
Subjt:  N

XP_004150423.1 uncharacterized protein LOC101221021 [Cucumis sativus]1.4e-8083.84Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSN+FT V NSSSHR KA HQK   AA GG DHPPAFSC CF+CYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN
        RWDSSPNRQLIHEIIDAYEEKLAESK GKNNKKERKK+N+ G VSGPGEGKGSE A KEEE RVTE+E AE GEE AEKG VRRIVS +GE+IWG WN
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN

XP_022927395.1 uncharacterized protein LOC111434229 [Cucurbita moschata]5.1e-8383.58Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN S HR KAAHQKP  AAK GSDHPP FSCDCFRCYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGW
        RWDSSPNRQ+IHEIIDAYEE LAESK+GKNNKKERKK+N    SGSVS PG+GKGSE A K EESRVTE E A+ GE EAEKGSVR IVS+IGE+IWGGW
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGW

Query:  N
        N
Subjt:  N

XP_038894832.1 uncharacterized protein LOC120083238 [Benincasa hispida]5.5e-9390.86Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSN+FT VNN S+HR KAAHQKP  AAKGGSDHPPAFSCDCFRCYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN
        RWDSSPNRQLIHEIIDAYEEKLAESK+GKNNKKERKK+NSG VSGPGEGK SEPAA+EEE RVTE+E AE GEEE EKGSVRRIVSFIGERIWG WN
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN

TrEMBL top hitse value%identityAlignment
A0A0A0LVV3 Uncharacterized protein6.8e-8183.84Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSN+FT V NSSSHR KA HQK   AA GG DHPPAFSC CF+CYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN
        RWDSSPNRQLIHEIIDAYEEKLAESK GKNNKKERKK+N+ G VSGPGEGKGSE A KEEE RVTE+E AE GEE AEKG VRRIVS +GE+IWG WN
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNS-GSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN

A0A1S3C9P0 uncharacterized protein LOC1034982287.7e-7779.29Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYRK GTVHPSPP+ISDHLSFLPTAILTL++ALSL+DREVLAYLISSCSN+FT V+NSS+HR KAAH K   A   GSDHPPAFSC CF+CYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN-SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN
        RWDSSPNRQLIHEIIDAYE+KLAE+K GKNNKKERKK+N SG+VSGPGEGKG+E AAK EE +VT     E GEEEAEKG VRRIVS +GE+IWG WN
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN-SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN

A0A5D3CKA3 Uncharacterized protein7.7e-7779.29Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYRK GTVHPSPP+ISDHLSFLPTAILTL++ALSL+DREVLAYLISSCSN+FT V+NSS+HR KAAH K   A   GSDHPPAFSC CF+CYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN-SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN
        RWDSSPNRQLIHEIIDAYE+KLAE+K GKNNKKERKK+N SG+VSGPGEGKG+E AAK EE +VT     E GEEEAEKG VRRIVS +GE+IWG WN
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN-SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN

A0A6J1ENT0 uncharacterized protein LOC1114342292.5e-8383.58Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        MKKLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN S HR KAAHQKP  AAK GSDHPP FSCDCFRCYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGW
        RWDSSPNRQ+IHEIIDAYEE LAESK+GKNNKKERKK+N    SGSVS PG+GKGSE A K EESRVTE E A+ GE EAEKGSVR IVS+IGE+IWGGW
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGW

Query:  N
        N
Subjt:  N

A0A6J1KLN6 uncharacterized protein LOC1114956878.3e-7980.39Show/hide
Query:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV
        M KLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SN+FTTVNN S HR KAA QKP  AAK GSDHPPAFSCDCFRCYTSYWV
Subjt:  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWV

Query:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAE---SGEEEAEKGSVRRIVSFIGERIW
        RWDSSPNRQ+IHEIIDAYEE LAESK+GKNNKKERKK+N    SGSVS  G+GKGSE A K EESRVTE E A+    GE EAEKG+VR IV +IGE+IW
Subjt:  RWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKN----SGSVSGPGEGKGSEPAAKEEESRVTEKETAE---SGEEEAEKGSVRRIVSFIGERIW

Query:  GGWN
        GGWN
Subjt:  GGWN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12020.1 unknown protein3.3e-3546.78Show/hide
Query:  MKKLYRKRGTVHPSPPII--SDH-LSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKA-AHQKPTTAAKGGSDHPPAFSCDCFRCYT
        MKKLYRK GTVHPSPP I  +DH L+ LP AI +LAA LS EDREVLAYLIS+ S  ++   N +S  +K  AH+K         +H P F CDCF CYT
Subjt:  MKKLYRKRGTVHPSPPII--SDH-LSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKA-AHQKPTTAAKGGSDHPPAFSCDCFRCYT

Query:  SYWVRWDSSPNRQLIHEIIDAYEEKLAESKSGKNN---KKERKKKNSGS----VSGPGEGKGSEPAAKEEESRVTEKETAESGE----------------
        SYWVRWDSSP+RQLIHEIIDA+E+ L ++K+ K N   KK+R+K++  S     S       SE  ++  ES V       S E                
Subjt:  SYWVRWDSSPNRQLIHEIIDAYEEKLAESKSGKNN---KKERKKKNSGS----VSGPGEGKGSEPAAKEEESRVTEKETAESGE----------------

Query:  ----------EEAEKGSVRRIVSFIGERIWGGW
                   E EKG+VRR VSFIGE+++G W
Subjt:  ----------EEAEKGSVRRIVSFIGERIWGGW

AT1G24270.1 unknown protein4.3e-1942.47Show/hide
Query:  KRGTVHPSPPIIS-------DHLS---FLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYT
        K+G VHPSPP+ S       D LS    L +AIL L + LS ED EVLAYLI+   N      N  S + K +H+             P   C CF CYT
Subjt:  KRGTVHPSPPIIS-------DHLS---FLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYT

Query:  SYWVRWDSSPNRQLIHEIIDAYE-----EKLAESKSGKNNKKERKK
        SYW +WDSS NR+LI++II+A+E     ++++ S + K NKK  KK
Subjt:  SYWVRWDSSPNRQLIHEIIDAYE-----EKLAESKSGKNNKKERKK

AT1G62422.1 unknown protein1.1e-3551.72Show/hide
Query:  MKKLYRKRGTVHPSPP--IISDH--LSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYT
        MKKL RK GTVHPSPP  I +D   LS LP AIL+L AALS+EDREVLAYLIS         N+  S+R     +      K  + H P F CDCF CYT
Subjt:  MKKLYRKRGTVHPSPP--IISDH--LSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYT

Query:  SYWVRWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEE--SRVTEKETAESGEE-EAEKGSVRRIVSFIGERIW
        SYWVRWD+SP RQLIHEIIDAYE+ L E K  K ++++R  K SG V+  G  + SE  +   E     +EK+    GEE E EKGSV +++SFIG+R  
Subjt:  SYWVRWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEE--SRVTEKETAESGEE-EAEKGSVRRIVSFIGERIW

Query:  GGW
        G W
Subjt:  GGW

AT5G13090.1 unknown protein1.7e-2342.48Show/hide
Query:  RKRGTVHPSPP---------IISDHLS-----------FLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPP
        +K+G V+PSPP           S+HL+            LP  IL L + LS E+REVLAYLI+  +      N+SS +++K    K +   K     PP
Subjt:  RKRGTVHPSPP---------IISDHLS-----------FLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPP

Query:  AFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKK
         F C+CF CYT+YW RWDSSPNR+LIHEII+A+E    E  S   +K +R KK
Subjt:  AFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEEKLAESKSGKNNKKERKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGACCACCTCTCGTTTCTCCCCACAGCCATCCTCACCCTCGCGGCGGCGCTCTC
GCTGGAGGATCGAGAGGTTTTGGCCTACCTCATCTCCTCCTGCTCCAACGAATTCACCACCGTTAACAACTCCTCCAGCCACCGCAGCAAGGCGGCCCACCAGAAACCCA
CTACCGCCGCAAAAGGCGGTTCCGATCATCCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTCAGATGGGATTCCTCTCCGAATCGGCAACTG
ATACACGAAATAATCGACGCTTATGAAGAGAAATTGGCTGAAAGCAAATCCGGGAAGAACAATAAGAAAGAGAGGAAGAAGAAGAATAGCGGGTCGGTTTCCGGTCCGGG
TGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTCGAGGGTGACGGAAAAGGAGACGGCGGAAAGCGGTGAGGAGGAGGCGGAGAAAGGGTCGGTAAGGAGGA
TTGTGAGTTTCATAGGGGAAAGAATCTGGGGAGGTTGGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGACCACCTCTCGTTTCTCCCCACAGCCATCCTCACCCTCGCGGCGGCGCTCTC
GCTGGAGGATCGAGAGGTTTTGGCCTACCTCATCTCCTCCTGCTCCAACGAATTCACCACCGTTAACAACTCCTCCAGCCACCGCAGCAAGGCGGCCCACCAGAAACCCA
CTACCGCCGCAAAAGGCGGTTCCGATCATCCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTCAGATGGGATTCCTCTCCGAATCGGCAACTG
ATACACGAAATAATCGACGCTTATGAAGAGAAATTGGCTGAAAGCAAATCCGGGAAGAACAATAAGAAAGAGAGGAAGAAGAAGAATAGCGGGTCGGTTTCCGGTCCGGG
TGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTCGAGGGTGACGGAAAAGGAGACGGCGGAAAGCGGTGAGGAGGAGGCGGAGAAAGGGTCGGTAAGGAGGA
TTGTGAGTTTCATAGGGGAAAGAATCTGGGGAGGTTGGAATTAG
Protein sequenceShow/hide protein sequence
MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNEFTTVNNSSSHRSKAAHQKPTTAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQL
IHEIIDAYEEKLAESKSGKNNKKERKKKNSGSVSGPGEGKGSEPAAKEEESRVTEKETAESGEEEAEKGSVRRIVSFIGERIWGGWN