CuGenDBv2

Gene ID	Lsi02G010910
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Nuclear transcription factor Y subunit gamma
Genome location	chr02:12321471..12330300
RNA-Seq Expression	Lsi02G010910
Synteny	Lsi02G010910
Gene Ontology terms	GO:0016310 - phosphorylation (biological process) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0054312.1 nuclear transcription factor Y subunit gamma [Cucumis melo var. makuwa]

3.8e-40

91.35

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG
        IAVLEEQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQDEKPDINDVPMEE  SQD+DHPVRQDLNESTLDLSLNLNALDDGGE  SK+DH+RDG
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG

Query:  KRKG
        KRKG
Subjt:  KRKG

XP_004150426.1 uncharacterized protein LOC101221727 [Cucumis sativus]

5.9e-41

90.38

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG
        IAVLEEQKNEAAENEA DNVEDEA++S+DVEPSS VATKGELQDEKPDINDVPMEESQSQD+D PVRQDLNESTLDLSLNLNALDDGGEA SK+DH+RDG
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG

Query:  KRKG
        KRKG
Subjt:  KRKG

XP_008458970.1 PREDICTED: uncharacterized protein LOC103498224 [Cucumis melo]

3.8e-40

91.35

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG
        IAVLEEQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQDEKPDINDVPMEE  SQD+DHPVRQDLNESTLDLSLNLNALDDGGE  SK+DH+RDG
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG

Query:  KRKG
        KRKG
Subjt:  KRKG

XP_023521102.1 uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo]

9.1e-34

84.76

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRD
        IAVLEEQKNEAAENEAAD VE EA KSNDVEP SAVA+ KGELQDEKPDINDVPM+E  SQD+DH VRQDLNESTLDLSLNLNAL+D GEA SK+DH+RD
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRD

Query:  GKRKG
        GKRKG
Subjt:  GKRKG

XP_038894538.1 uncharacterized protein LOC120083076 [Benincasa hispida]

1.4e-37

90.38

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG
        IAVLEEQKNEAAENEAADNVEDEAIKSNDV    AVATKGE+QDEKPDINDVPMEE  SQD+DHPVRQDLNESTLDLSLNLNALDDGGEA SK+DHVRDG
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG

Query:  KRKG
        KRKG
Subjt:  KRKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVV2 Uncharacterized protein

9.8e-42

90.48

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Query:  LIAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRD
        LIAVLEEQKNEAAENEA DNVEDEA++S+DVEPSS VATKGELQDEKPDINDVPMEESQSQD+D PVRQDLNESTLDLSLNLNALDDGGEA SK+DH+RD
Subjt:  LIAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRD

Query:  GKRKG
        GKRKG
Subjt:  GKRKG

A0A1S3CAB6 uncharacterized protein LOC103498224

1.8e-40

91.35

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG
        IAVLEEQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQDEKPDINDVPMEE  SQD+DHPVRQDLNESTLDLSLNLNALDDGGE  SK+DH+RDG
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG

Query:  KRKG
        KRKG
Subjt:  KRKG

A0A5A7UEU0 Nuclear transcription factor Y subunit gamma

1.8e-40

91.35

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG
        IAVLEEQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQDEKPDINDVPMEE  SQD+DHPVRQDLNESTLDLSLNLNALDDGGE  SK+DH+RDG
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG

Query:  KRKG
        KRKG
Subjt:  KRKG

A0A5D3CMI7 Putative serine/threonine-protein kinase

1.8e-40

91.35

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG
        IAVLEEQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQDEKPDINDVPMEE  SQD+DHPVRQDLNESTLDLSLNLNALDDGGE  SK+DH+RDG
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRDG

Query:  KRKG
        KRKG
Subjt:  KRKG

A0A6J1EHR2 uncharacterized protein LOC111432647

1.3e-33

83.81

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Query:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRD
        IAVLEEQKNEAAENE AD VE EA KSNDVEP SAVA+ KGELQDEKPDINDVPM+E  SQD+DH VRQDLNESTLDLSLNLNAL+D GEA SK+DH+RD
Subjt:  IAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQDEKPDINDVPMEESQSQDSDHPVRQDLNESTLDLSLNLNALDDGGEACSKSDHVRD

Query:  GKRKG
        GKRKG
Subjt:  GKRKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G22320.1 unknown protein

8.8e-11

46.09

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Query:  IAVLEEQKNEAAENEAADNVE--DEAIKSNDVEPSSAV----------ATKGELQ-DEKPDINDVPMEESQ-------SQDSDHPVRQDLNESTLDLSLN
        IAVLEEQK E  E E  D +E  D+  + N VE    V            K E++ +EKPDINDVPME+ Q         D +  VRQDLNEST+DL LN
Subjt:  IAVLEEQKNEAAENEAADNVE--DEAIKSNDVEPSSAV----------ATKGELQ-DEKPDINDVPMEESQ-------SQDSDHPVRQDLNESTLDLSLN

Query:  LNALDDGGEACSKSD
        LNA D   E   K D
Subjt:  LNALDDGGEACSKSD

AT4G22320.2 unknown protein

6.8e-11

46.49

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Query:  IAVLEEQKNEAAENEAADNVE--DEAIKSNDVEPSSAV----------ATKGELQ-DEKPDINDVPMEESQ------SQDSDHPVRQDLNESTLDLSLNL
        IAVLEEQK E  E E  D +E  D+  + N VE    V            K E++ +EKPDINDVPME+ Q        D +  VRQDLNEST+DL LNL
Subjt:  IAVLEEQKNEAAENEAADNVE--DEAIKSNDVEPSSAV----------ATKGELQ-DEKPDINDVPMEESQ------SQDSDHPVRQDLNESTLDLSLNL

Query:  NALDDGGEACSKSD
        NA D   E   K D
Subjt:  NALDDGGEACSKSD

Sequences

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CDS sequence

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mRNA sequence

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ATGGGAAATTGGATTTCTAGATGCATTCCTTGGGACTCTTCTTGCAGTGCCTTAAGCTGGACATCAAGTACAGTATCACTGTTTTCATTCCTTAATTTAGTCAACCTTAT
TGCTGTGTTAGAGGAACAGAAAAACGAGGCTGCAGAAAATGAAGCCGCTGATAATGTTGAAGATGAAGCTATCAAATCAAATGATGTTGAACCAAGTAGCGCAGTAGCAA
CCAAGGGGGAGCTTCAAGACGAGAAACCAGATATTAATGACGTGCCAATGGAAGAAAGTCAGTCTCAGGACAGCGATCATCCAGTGCGCCAAGATTTGAACGAAAGCACT
TTGGATTTAAGTCTGAACTTGAATGCTCTCGACGATGGCGGTGAAGCTTGTTCAAAATCTGATCACGTTAGAGATGGCAAGAGGAAGGGCTAACCTTAAGAGTGTGGATT
GCTTGGGCCTGTCATTCTACATTTTAGAAGCAGCTCCAGTTTCGTCCTTACCAATTCAATTCTCTTATTGGAACTGAGTTACTTGGCATCCCACATCTCTGCTAATCCTG
GAAGTATATGGTTCTCTCTAGTATGATTACTTATTTGAGCTAATTTTGATTTGTTCACAGAAAATATACAGTACCAATTCTTTTATCCTTAAAATTCGATATCAATGTAA
GAAACTGTAACGAGAGGCAAAGGAATTGTGTACGATTATCCACATGTTGAGATTTTAGCTTTATTTGATTTCACTGTCAAAATGATTGTCTAATGGACTCACAATCCCTG
CTATTTCAATCGATATATGACACTTTTTTTTCTCCCA

Protein sequence

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MGNWISRCIPWDSSCSALSWTSSTVSLFSFLNLVNLIAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQDEKPDINDVPMEESQSQDSDHPVRQDLNEST
LDLSLNLNALDDGGEACSKSDHVRDGKRKG

Lsi02G010910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome