CuGenDBv2

Gene ID	Lsi02G010920
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Mitochondrial pyruvate carrier
Genome location	chr02:12346650..12349157
RNA-Seq Expression	Lsi02G010920
Synteny	Lsi02G010920
Gene Ontology terms	GO:0006850 - mitochondrial pyruvate transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR005336 - Mitochondrial pyruvate carrier

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008458967.1 PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis melo]

2.1e-12

100

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

XP_011655152.1 mitochondrial pyruvate carrier 4 [Cucumis sativus]

6.2e-12

97.44

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVA AKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

XP_022142591.1 mitochondrial pyruvate carrier 4 [Momordica charantia]

1.4e-11

97.44

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFS EEVAAAKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

XP_038894594.1 mitochondrial pyruvate carrier 4 isoform X1 [Benincasa hispida]

2.1e-12

100

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

XP_038894595.1 mitochondrial pyruvate carrier 4 isoform X2 [Benincasa hispida]

2.1e-12

100

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTI1 Mitochondrial pyruvate carrier

3.0e-12

97.44

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVA AKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

A0A1S3C939 Mitochondrial pyruvate carrier

1.0e-12

100

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

A0A6J1CMM8 Mitochondrial pyruvate carrier

6.6e-12

97.44

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVNIAMAGTGIYQLTRKIQHDYFS EEVAAAKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

A0A6J1EBD9 Mitochondrial pyruvate carrier

1.1e-11

92.31

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVAA +E
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

A0A6J1JXA3 Mitochondrial pyruvate carrier

1.5e-11

92.31

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVAA +E
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

SwissProt top hits

e value

%identity

Alignment

O49636 Mitochondrial pyruvate carrier 4

6.0e-10

74.36

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVN+AMAGTGIYQL RKI+HDY ++ E A A E
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

Q8L7H8 Mitochondrial pyruvate carrier 2

6.6e-09

71.79

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVN+AMA TGIYQLTRKI++DY S+ E A   E
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

Q8LD38 Mitochondrial pyruvate carrier 3

1.6e-07

66.67

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSV++ MA TGIYQLTRKI+HDY  +     AKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

Arabidopsis top hits

e value

%identity

Alignment

AT4G05590.1 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336)

1.2e-08

66.67

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSV++ MA TGIYQLTRKI+HDY  +     AKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

AT4G05590.2 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336)

1.2e-08

66.67

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSV++ MA TGIYQLTRKI+HDY  +     AKE
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

AT4G14695.1 Uncharacterised protein family (UPF0041)

4.7e-10

71.79

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVN+AMA TGIYQLTRKI++DY S+ E A   E
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

AT4G14695.2 Uncharacterised protein family (UPF0041)

4.7e-10

71.79

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVN+AMA TGIYQLTRKI++DY S+ E A   E
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

AT4G22310.1 Uncharacterised protein family (UPF0041)

4.3e-11

74.36

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Query:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE
        KNWNLFSVN+AMAGTGIYQL RKI+HDY ++ E A A E
Subjt:  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE

Sequences

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CDS sequence

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mRNA sequence

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ATGTCTTCCCTCAAAGCTCGTAATACTGTATCACCTTTCATGGAAACGTCATCTTTTGAAAGGAACGACAATGGAGAGGATAGCCTTGTGGGAAGGGGCATTAATGGAGT
TTCAATGGAAAATTTCTTTCTTTCAAAGGAGAGAGACTTTGATGGGGGTCACCGGCCATTGAAGAGCAACTGTAGGAGGTTATTTCCTGGTCAGAGGGTTGGCCAGAGTG
GGTTCATGAAGAACTGGAACCTTTTTAGTGTCAACATTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCACGATTATTTCTCCAAGGAGGAAGTA
GCTGCTGCCAAAGAATGATGACGAAATATGATCTATTCTTTACTTACCTCTGTGACGAGCAGAATTTCCCTTGCTTTTCCATGCGTCCCCCCTTCAAATCTGACCTACTA
AAGGCTTCATGACTTTTTCTTTATTGTGAATCAATTTATCTCCTTTATTTTACTTTTGTAGCCATGCAATTATGCTTGAAACTGTTGAAAAAATAAATAAGATCCTGATT
TAGGCATCACCCTCTATGAAACGCTTCTGAATGGATGAGTTATGGAAATTGTGCATTAAAAACATCCATGTTGAAGATGCAGGTTCAAATTTCAACGGCCAACTTGATGA
AATATAAGCAGTCATTAAAGGAAACGGGAATAAGGAATGTGATTGGTTTTACAAAATACGGCAATGAAATCAATGTGGGACTCCACCAATCTAGAAAATTATATTTTATA
CAGCCAGGTTTTGAGATAGATTGTATAGATGTTTACTTTTTGAAACCTAGCTAGTCATTATCTTAAGATAAAATATCCAATGAACCATAAAATTTTATTATCAAGTATTT
GACCCTTTTTCTTTATGAACGGAGCAATCTCAAT

Protein sequence

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MSSLKARNTVSPFMETSSFERNDNGEDSLVGRGINGVSMENFFLSKERDFDGGHRPLKSNCRRLFPGQRVGQSGFMKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEV
AAAKE

Lsi02G010920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome