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Lsi02G010960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G010960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:12445931..12446543
RNA-Seq ExpressionLsi02G010960
SyntenyLsi02G010960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054321.1 uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa]9.5e-3968Show/hide
Query:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK
        MGANLC+IRRP TADAS D   GL FAG   CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRK
Subjt:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK

Query:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        VHPARI + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

TYK12357.1 uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa]5.2e-3766.9Show/hide
Query:  MGANLCSIRRPETADASSDDGLDFAGCGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVHPAR
        MGANLC+IRRP TADAS D    +  CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRKVHPAR
Subjt:  MGANLCSIRRPETADASSDDGLDFAGCGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVHPAR

Query:  ISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        I + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  ISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

XP_008458958.1 PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo]5.6e-3968.92Show/hide
Query:  MGANLCSIRRPETADASSDDGLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVH
        MGANLC+IRRP TADAS  DGL FAG   CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRKVH
Subjt:  MGANLCSIRRPETADASSDDGLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVH

Query:  PARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        PARI + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  PARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

XP_008458959.1 PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo]5.2e-3766.9Show/hide
Query:  MGANLCSIRRPETADASSDDGLDFAGCGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVHPAR
        MGANLC+IRRP TADAS D    +  CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRKVHPAR
Subjt:  MGANLCSIRRPETADASSDDGLDFAGCGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVHPAR

Query:  ISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        I + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  ISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

XP_016902355.1 PREDICTED: uncharacterized protein LOC103498217 isoform X1 [Cucumis melo]9.5e-3968Show/hide
Query:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK
        MGANLC+IRRP TADAS D   GL FAG   CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRK
Subjt:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK

Query:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        VHPARI + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

TrEMBL top hitse value%identityAlignment
A0A0A0LT52 Uncharacterized protein2.3e-3866.22Show/hide
Query:  MGANLCSIRRPETADASSDDGLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVH
        MGANLC+IR P TADAS  DGL FAG   CGWRRR WWRRER +VKRE+EASIEKK    E+MSLEEL+LASPG PSERGF N         GGFKRKVH
Subjt:  MGANLCSIRRPETADASSDDGLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVH

Query:  PARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        PARI +CSS  +       +SVAEDEY SHGGF I  S+SGKLKKK +
Subjt:  PARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

A0A1S3C9M5 uncharacterized protein LOC103498217 isoform X22.7e-3968.92Show/hide
Query:  MGANLCSIRRPETADASSDDGLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVH
        MGANLC+IRRP TADAS  DGL FAG   CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRKVH
Subjt:  MGANLCSIRRPETADASSDDGLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVH

Query:  PARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        PARI + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  PARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

A0A1S4E301 uncharacterized protein LOC103498217 isoform X14.6e-3968Show/hide
Query:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK
        MGANLC+IRRP TADAS D   GL FAG   CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRK
Subjt:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK

Query:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        VHPARI + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

A0A5A7ULA6 Uncharacterized protein4.6e-3968Show/hide
Query:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK
        MGANLC+IRRP TADAS D   GL FAG   CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRK
Subjt:  MGANLCSIRRPETADASSDD--GLDFAG---CGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRK

Query:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        VHPARI + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  VHPARISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

A0A5D3CKA0 Uncharacterized protein2.5e-3766.9Show/hide
Query:  MGANLCSIRRPETADASSDDGLDFAGCGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVHPAR
        MGANLC+IRRP TADAS D    +  CGWRRRQWWRRER EVKRE+EASIEKKE K E+MSLEEL+LASPGAPSERG  N         GGFKRKVHPAR
Subjt:  MGANLCSIRRPETADASSDDGLDFAGCGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNN---------GGFKRKVHPAR

Query:  ISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA
        I + SSV +        SVA+DEY SH GF I R ESGKLKKK +
Subjt:  ISQCSSVSE-------RSVAEDEY-SHGGFSISRSESGKLKKKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCAATCTCTGCAGCATTAGACGCCCGGAGACGGCGGACGCCTCCTCCGATGATGGGCTGGACTTTGCAGGCTGCGGGTGGAGAAGGCGACAATGGTGGAGGCG
AGAGAGAAGAGAAGTGAAGAGAGAGGTAGAGGCGTCGATTGAGAAGAAGGAAATGAAGAATGAGTACATGTCTCTTGAGGAGTTGATGTTGGCTTCTCCAGGAGCGCCGT
CGGAGAGAGGTTTCAACAATGGCGGATTCAAGAGAAAAGTGCATCCGGCGAGGATTTCGCAGTGTTCTTCGGTTTCTGAGAGATCAGTCGCAGAGGATGAGTATTCGCAT
GGCGGTTTTTCGATTAGTAGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGCTGCCGGAGGTGTCGGACGTTATTGTAATTCCCTCGCCGGAGGA
mRNA sequenceShow/hide mRNA sequence
ACTTCTCCGTCCAAAATTCCTTTACTTATCGCCATTCTCCCTCTCTCTCTGTTTCTCTTCAAACCAATTTCACTTCTCTTTTCCCATCTCCCATGGGAGCCAATCTCTGC
AGCATTAGACGCCCGGAGACGGCGGACGCCTCCTCCGATGATGGGCTGGACTTTGCAGGCTGCGGGTGGAGAAGGCGACAATGGTGGAGGCGAGAGAGAAGAGAAGTGAA
GAGAGAGGTAGAGGCGTCGATTGAGAAGAAGGAAATGAAGAATGAGTACATGTCTCTTGAGGAGTTGATGTTGGCTTCTCCAGGAGCGCCGTCGGAGAGAGGTTTCAACA
ATGGCGGATTCAAGAGAAAAGTGCATCCGGCGAGGATTTCGCAGTGTTCTTCGGTTTCTGAGAGATCAGTCGCAGAGGATGAGTATTCGCATGGCGGTTTTTCGATTAGT
AGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGCTGCCGGAGGTGTCGGACGTTATTGTAATTCCCTCGCCGGAGGA
Protein sequenceShow/hide protein sequence
MGANLCSIRRPETADASSDDGLDFAGCGWRRRQWWRRERREVKREVEASIEKKEMKNEYMSLEELMLASPGAPSERGFNNGGFKRKVHPARISQCSSVSERSVAEDEYSH
GGFSISRSESGKLKKKAAGGVGRYCNSLAGG