CuGenDBv2

Gene ID	Lsi02G011260
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH-u_ox-rdase domain-containing protein
Genome location	chr02:13158762..13159722
RNA-Seq Expression	Lsi02G011260
Synteny	Lsi02G011260
Gene Ontology terms	GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR019721 - NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019380.1 hypothetical protein SDJN02_18341 [Cucurbita argyrosperma subsp. argyrosperma]

7.9e-48

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNE EVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

XP_008463609.1 PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis melo]

1.6e-48

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

XP_011654950.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus]

2.1e-48

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

XP_022142552.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Momordica charantia]

7.2e-49

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

XP_022927362.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata]

1.2e-48

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNEGEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CJL9 NADH-ubiquinone oxidoreductase 20.9 kDa subunit

7.7e-49

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

A0A6J1CN33 NADH-ubiquinone oxidoreductase 20.9 kDa subunit

3.5e-49

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

A0A6J1EGY7 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like

5.9e-49

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNEGEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

A0A6J1EHK1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like

3.5e-49

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

A0A6J1HSH8 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like

3.5e-49

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16450.1 unknown protein

7.9e-46

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITA  K +YPV+DRNP FTKVVGNF TLDYLRF TITG+SV+VGYLSGIKPGI+GPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA Y+K
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

AT4G16450.2 unknown protein

7.9e-46

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Query:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
        MNTDITA  K +YPV+DRNP FTKVVGNF TLDYLRF TITG+SV+VGYLSGIKPGI+GPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA Y+K
Subjt:  MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

Sequences

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CDS sequence

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ATGAACACCGACATTACGGCGTCGACCAAGCCAGAGTACCCAGTAATAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTT
CGTCACCATCACCGGTGTTTCCGTCTCCGTCGGTTATCTTTCGGGGATTAAGCCCGGGATTAGGGGCCCGTCAATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCT
TCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTTATAAGAAATAA

mRNA sequence

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ATGAAAGGCCCATTCATCAGTTAGCTCAGCAACGACTAGCACTCGTATCATCTTCAACCGCAACGAGTCGGCAAGCGAGTTTTTGCAGAGTCACACAGCAAGAGAGAGAG
AACCGGCGGAGATCAGTTTCAGCTCCGGAGAAGACAAGATGAACACCGACATTACGGCGTCGACCAAGCCAGAGTACCCAGTAATAGATCGGAACCCTCCATTCACTAAA
GTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGTGTTTCCGTCTCCGTCGGTTATCTTTCGGGGATTAAGCCCGGGATTAGGGGCCCGTC
AATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCTTCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTT
ATAAGAAATAAGATTGTGCGTTTTAGGGTTTTTTTTCTTTTTCTTTTTTGCTTTCTTTTTCTGAAATTCGAGTTCCATTTGTGGACATTTTTATGATGTTCCAGTTATTA
AACGTGCAACCGGGTTGTATCAATAAGCAAATTGACACTTCACTTTTTTCTGTGTTGCCCATTTTTCATCTAAATGAAATAGTTGAAGACTTTACATGATTTCTTTGCTT
TTGATCGATAAACAAAGGTGACCCATTAAGGCGTTTGGAGGAATGAATCATATACTTGTCTCTTGTGCCATTTGTAAGTCTGTTAGTAGACCTTTTTTAAGGGGTCTCGT
TGTCATAACTCGTATTGATTTCAGCAGAGTCCCAGAAAATAGAAAATAGAGCTTTAAGACGGAGAAAAATGTTCTTTATGATTTTATCAGAACAGTACAC

Protein sequence

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MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

Lsi02G011260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome