; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G011280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G011280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionX8 domain-containing protein
Genome locationchr02:13187853..13190417
RNA-Seq ExpressionLsi02G011280
SyntenyLsi02G011280
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573531.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. sororia]6.2e-5587.5Show/hide
Query:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS
        S ST LTILHLS+LL FI+ P  SEGQF EEWCIADEQVPDDELQRALDWACGKGGADC +IQ+K+PCFYPNTVRDHASYAFNSYYQKFKHKGA+C+FNS
Subjt:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS

Query:  AAMVTALDPSHGSCKFEYVP
        AAMVTALDPSHGSCKFEYVP
Subjt:  AAMVTALDPSHGSCKFEYVP

XP_008463607.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo]2.3e-5790.16Show/hide
Query:  MSSSTHL-TILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF
        MSSSTHL  IL+LS LL+FIITPTIS+   DEEWCIADEQVPDDELQRALDWACGKGGADC NIQMKQPCFYPNT+RDHASYAFNSYYQKFKHKGATCYF
Subjt:  MSSSTHL-TILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF

Query:  NSAAMVTALDPSHGSCKFEYVP
        NSAAMVT+LDPSHGSCKFEYVP
Subjt:  NSAAMVTALDPSHGSCKFEYVP

XP_011654946.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis sativus]5.4e-5992.62Show/hide
Query:  MSSSTHLTILHLSLLLVFIITPTIS-EGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF
        MSSSTHL IL LS LL+FIITPTIS +  FDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF
Subjt:  MSSSTHLTILHLSLLLVFIITPTIS-EGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF

Query:  NSAAMVTALDPSHGSCKFEYVP
        NSAAMVT+LDPSHGSCKFEYVP
Subjt:  NSAAMVTALDPSHGSCKFEYVP

XP_022925351.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata]3.1e-5486.67Show/hide
Query:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS
        S ST LTILHLS+LL FI+ P  SEGQ  EEWCIADEQVPDDELQRALDWACGKGGADC +IQ+K+PCFYPNTVRDHASYAFNSYYQKFKHKGA+C+FNS
Subjt:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS

Query:  AAMVTALDPSHGSCKFEYVP
        AAMVTALDPSHGSCKFEYVP
Subjt:  AAMVTALDPSHGSCKFEYVP

XP_038895406.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida]3.2e-5992.56Show/hide
Query:  MSSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFN
        MSSST   IL  SLLLVFIITPT SE QFD+EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFN
Subjt:  MSSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTALDPSHGSCKFE+VP
Subjt:  SAAMVTALDPSHGSCKFEYVP

TrEMBL top hitse value%identityAlignment
A0A0A0LW57 X8 domain-containing protein2.6e-5992.62Show/hide
Query:  MSSSTHLTILHLSLLLVFIITPTIS-EGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF
        MSSSTHL IL LS LL+FIITPTIS +  FDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF
Subjt:  MSSSTHLTILHLSLLLVFIITPTIS-EGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF

Query:  NSAAMVTALDPSHGSCKFEYVP
        NSAAMVT+LDPSHGSCKFEYVP
Subjt:  NSAAMVTALDPSHGSCKFEYVP

A0A1S3CJN7 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like1.1e-5790.16Show/hide
Query:  MSSSTHL-TILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF
        MSSSTHL  IL+LS LL+FIITPTIS+   DEEWCIADEQVPDDELQRALDWACGKGGADC NIQMKQPCFYPNT+RDHASYAFNSYYQKFKHKGATCYF
Subjt:  MSSSTHL-TILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYF

Query:  NSAAMVTALDPSHGSCKFEYVP
        NSAAMVT+LDPSHGSCKFEYVP
Subjt:  NSAAMVTALDPSHGSCKFEYVP

A0A6J1CNC5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like2.5e-5487.6Show/hide
Query:  MSSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFN
        MSS   L IL LSLLL+FII P   EGQ  EEWCIADEQVPDDELQRALDWACGKGGADCR IQ+KQPCFYPNTVRDHASYAFN+YYQKFKHKGATCYFN
Subjt:  MSSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTALDPSHGSCKFEYVP
Subjt:  SAAMVTALDPSHGSCKFEYVP

A0A6J1EBZ4 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like1.5e-5486.67Show/hide
Query:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS
        S ST LTILHLS+LL FI+ P  SEGQ  EEWCIADEQVPDDELQRALDWACGKGGADC +IQ+K+PCFYPNTVRDHASYAFNSYYQKFKHKGA+C+FNS
Subjt:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS

Query:  AAMVTALDPSHGSCKFEYVP
        AAMVTALDPSHGSCKFEYVP
Subjt:  AAMVTALDPSHGSCKFEYVP

A0A6J1HUR1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like7.4e-5485Show/hide
Query:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS
        S ST LTILHLS+LL F++ P  SEGQF EEWCIADEQVPDDELQRALDWACGKGGA+C +IQ+K+PCFYP+TVRDHASYAFNSYYQKFKHKGA+C+FNS
Subjt:  SSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNS

Query:  AAMVTALDPSHGSCKFEYVP
        AAMVTALDPSHGSCKFEYVP
Subjt:  AAMVTALDPSHGSCKFEYVP

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 16.1e-2145.22Show/hide
Query:  SSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSA
        +ST + +LH+S    F+   T      ++ +CIA + V    LQ ALDWACG G ++C  IQ  + C+ PN V+ HAS+AFNSYYQK      +C F   
Subjt:  SSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSA

Query:  AMVTALDPSHGSCKF
        AM+T  DPSHGSC F
Subjt:  AMVTALDPSHGSCKF

Q8VYE5 Glucan endo-1,3-beta-glucosidase 127.2e-2250.55Show/hide
Query:  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP
        ++WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFN+YYQ+       C FN A++    DPS+G+C +   P
Subjt:  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP

Q94CD8 Glucan endo-1,3-beta-glucosidase 42.3e-2049.41Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKF
        +C+A     DD+L   L+WACG+G A+C  IQ  QPC+ PN V+ HAS+AFN YYQK K  G TC F+  A+ T  DPS+ +C +
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKF

Q9FJU9 Glucan endo-1,3-beta-glucosidase 131.4e-1745.78Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSC
        WCIA  +  + +L+ ALDWACG G  DC  IQ  QPCF P+T+  HAS+ FNSY+Q+ +     C F  A +    DPS+  C
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSC

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 52.0e-1941.88Show/hide
Query:  SSTHLTILHLSLLLVFIITPTISEGQF--DEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFN
        S   L+IL  +  ++ +IT     GQ    E WC+A     D  LQ A++WACG+GGADC  IQ   PC  P  V+  AS+ FN+YY K   +   C FN
Subjt:  SSTHLTILHLSLLLVFIITPTISEGQF--DEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFN

Query:  SAAMVTALDPSHGSCKF
        + A +T+L+PS G+CK+
Subjt:  SAAMVTALDPSHGSCKF

Arabidopsis top hitse value%identityAlignment
AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein5.1e-2357.47Show/hide
Query:  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGA-TCYFNSAAMVTALDPSHGSCKF
        +WCIA        LQ ALD+ACG GGADC  IQ    C+ PNT+RDHAS+AFNSYYQ  KH G+ +C F  AA +T+ DPS GSC F
Subjt:  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGA-TCYFNSAAMVTALDPSHGSCKF

AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein2.0e-2760Show/hide
Query:  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPS
        +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  QPCF PNTV+DHAS  FN+YYQ++K  G +C FNS A +T  DPS
Subjt:  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPS

AT2G04910.2 Carbohydrate-binding X8 domain superfamily protein5.4e-3362.22Show/hide
Query:  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP
        +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  QPCF PNTV+DHAS  FN+YYQ++K  G +C FNS A +T  DPSH SC FEYVP
Subjt:  EWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP

AT4G29360.1 O-Glycosyl hydrolases family 17 protein5.1e-2350.55Show/hide
Query:  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP
        ++WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFN+YYQ+       C FN A++    DPS+G+C +   P
Subjt:  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP

AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein1.9e-4164.71Show/hide
Query:  STHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMK-QPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSA
        ST L  + L LL++ +  P  SE +  E+WCIADEQ PDDELQ ALDWACGKGGADC  +Q + QPCF PNT+RDHAS+AFNSYYQ +K+KG +CYF  A
Subjt:  STHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMK-QPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSA

Query:  AMVTALDPSHGSCKFEYVP
        AM+T LDPSHGSC++EY P
Subjt:  AMVTALDPSHGSCKFEYVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCTACTCATCTCACTATTCTCCATCTCTCTTTGCTTCTAGTTTTTATCATAACTCCAACAATATCAGAGGGTCAATTTGATGAGGAGTGGTGCATAGCTGA
TGAGCAAGTTCCAGATGATGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAGCTGATTGTAGGAATATTCAAATGAAGCAGCCTTGTTTTTACCCAAACA
CTGTTAGAGATCATGCTTCATATGCTTTCAACAGTTACTACCAAAAGTTCAAGCATAAGGGAGCCACTTGCTACTTCAATTCAGCTGCCATGGTCACTGCTCTTGATCCT
AGTCATGGTTCATGCAAGTTTGAGTATGTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
AGATTTACAAGAAGATACTGAAAGCCACTGTGTGTTGTGAAGAAACAAATGTCTTCCTCTACTCATCTCACTATTCTCCATCTCTCTTTGCTTCTAGTTTTTATCATAAC
TCCAACAATATCAGAGGGTCAATTTGATGAGGAGTGGTGCATAGCTGATGAGCAAGTTCCAGATGATGAGTTGCAAAGAGCTCTTGATTGGGCTTGTGGAAAAGGAGGAG
CTGATTGTAGGAATATTCAAATGAAGCAGCCTTGTTTTTACCCAAACACTGTTAGAGATCATGCTTCATATGCTTTCAACAGTTACTACCAAAAGTTCAAGCATAAGGGA
GCCACTTGCTACTTCAATTCAGCTGCCATGGTCACTGCTCTTGATCCTAGTCATGGTTCATGCAAGTTTGAGTATGTTCCTTGAAGAAGAAGAACATATATAATTGATGA
TCAAAGATGCTTCGTGATTATAATTTAAGCTTCCCAAAGTTTTTCCAATTCCATTATTGATCTTGTGTACTTGGTTGTGTGAAAGCATTTTCCATTTTCAATTTTTAAGG
TAGGCTCCAAGAATCTTTTAGAATCTAAGGTTATTAATCAATTAACTATTGAAGTTGGTTCTTTTTCTTTTATGAGAAAATCAATCAAAGTTTAATGATATGATGTATTG
ATTGAGTTTG
Protein sequenceShow/hide protein sequence
MSSSTHLTILHLSLLLVFIITPTISEGQFDEEWCIADEQVPDDELQRALDWACGKGGADCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDP
SHGSCKFEYVP