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Lsi02G011560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G011560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:13937701..13938126
RNA-Seq ExpressionLsi02G011560
SyntenyLsi02G011560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042344.1 hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa]2.3e-4078.69Show/hide
Query:  MGNCIVLPCVGSPQKKLRGLEKANGSAT-TVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF
        MGNCIVLP V SPQKKL+GL+KA G AT  V SA+EC NDPLL    S T+TSLQVGEV+NVVPCLKELENLLAS+KI YSD  G GA+KVKIVVT+EQF
Subjt:  MGNCIVLPCVGSPQKKLRGLEKANGSAT-TVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF

Query:  KLLLANAKKLQSRHRLLSYTGP
        KLLLANAKKLQSR+RLLSYTGP
Subjt:  KLLLANAKKLQSRHRLLSYTGP

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4385.09Show/hide
Query:  MGNCIVLPCVGSPQKKLRGLEKANGSATTVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFK
        MGNCIVLPCV SPQKKLRG+EKA   ATTVDSATECCND LL DF+S TRTSLQVGEV++VVPCLKELE LL S+KI YSD  GAGARKVKIVVTKEQFK
Subjt:  MGNCIVLPCVGSPQKKLRGLEKANGSATTVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFK

Query:  LLLANAKKLQSRHR
        LLLANAKKLQSRHR
Subjt:  LLLANAKKLQSRHR

KGN64995.1 hypothetical protein Csa_022837 [Cucumis sativus]7.5e-5280.99Show/hide
Query:  MGNCIVLPCVGSPQKKLRGLEKANGSATT-VDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF
        MGNCIVLP V SPQKKLRGL+KA   ATT V SATEC NDPLL DF S T+TSLQV EV+NVVPCLKELENLLAS KI YSD   AGA+KVKIVVTKEQF
Subjt:  MGNCIVLPCVGSPQKKLRGLEKANGSATT-VDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF

Query:  KLLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISEEVDF
        KLLL+NAKKLQ RHRLLSYTGP KGC+ WRPTLSAISEE DF
Subjt:  KLLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISEEVDF

XP_023542404.1 uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo]9.5e-3160.87Show/hide
Query:  MGNCIVLPCVGSPQKKLRGLEKANGSATTVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFK
        MGNCI+LPCV SP K L     +   AT VDSATE  NDPLL                 +VVPCLKELENLL   K AYS  +G GAR+VKIVVT+EQFK
Subjt:  MGNCIVLPCVGSPQKKLRGLEKANGSATTVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFK

Query:  LLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISEE
        LLLANAKK+QS +RLLSY GP +G +KWRP LS ISEE
Subjt:  LLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISEE

XP_038877793.1 uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida]1.4e-5086.05Show/hide
Query:  PQKKLRGLEKANGSATTVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFKLLLANAKKLQSR
        PQKKLR LEKA       DSATEC  DPLLLDFTSPTRT LQVGEVQN+VPCLKELENLLAS+KIAYSD  GAGARKVKIVVTKEQFKLLLANAKKLQSR
Subjt:  PQKKLRGLEKANGSATTVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFKLLLANAKKLQSR

Query:  HRLLSYTGPHKGCQKWRPTLSAISEEVDF
        HRLLSYTGP KGC+KWRPTLSAISEE DF
Subjt:  HRLLSYTGPHKGCQKWRPTLSAISEEVDF

TrEMBL top hitse value%identityAlignment
A0A0A0LSY9 Uncharacterized protein3.6e-5280.99Show/hide
Query:  MGNCIVLPCVGSPQKKLRGLEKANGSATT-VDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF
        MGNCIVLP V SPQKKLRGL+KA   ATT V SATEC NDPLL DF S T+TSLQV EV+NVVPCLKELENLLAS KI YSD   AGA+KVKIVVTKEQF
Subjt:  MGNCIVLPCVGSPQKKLRGLEKANGSATT-VDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF

Query:  KLLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISEEVDF
        KLLL+NAKKLQ RHRLLSYTGP KGC+ WRPTLSAISEE DF
Subjt:  KLLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISEEVDF

A0A2P6Q220 Uncharacterized protein5.1e-0631.76Show/hide
Query:  MGNCIVLPCVGSPQKKLR------GLEKANGSATTVDSATECCNDPLLLDFTSP-----TRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARK
        MGNC+ +P    PQ+K++      G+E+ +   T  +  +       L+   +P       T L+ GEV ++VP L  L      +K+A+ +      +K
Subjt:  MGNCIVLPCVGSPQKKLR------GLEKANGSATTVDSATECCNDPLLLDFTSP-----TRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARK

Query:  VKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISE
        V+IVVT+EQ  LLL  AKK++S +  +   G  +  +KWRP+L+ I E
Subjt:  VKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPHKGCQKWRPTLSAISE

A0A5D3CW41 Uncharacterized protein1.1e-4078.69Show/hide
Query:  MGNCIVLPCVGSPQKKLRGLEKANGSAT-TVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF
        MGNCIVLP V SPQKKL+GL+KA G AT  V SA+EC NDPLL    S T+TSLQVGEV+NVVPCLKELENLLAS+KI YSD  G GA+KVKIVVT+EQF
Subjt:  MGNCIVLPCVGSPQKKLRGLEKANGSAT-TVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQF

Query:  KLLLANAKKLQSRHRLLSYTGP
        KLLLANAKKLQSR+RLLSYTGP
Subjt:  KLLLANAKKLQSRHRLLSYTGP

A0A5N5M953 Uncharacterized protein1.6e-0734Show/hide
Query:  MGNCI-VLPCVGSPQKKL---RGLEKANGSATTVDSATECCNDPLLLDFTS------PTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKV
        MGNCI  +PC    + K+    G EK   S+T V   T       +L   +      P  T L+ GEV +++P L +   L  S+K+   +      RKV
Subjt:  MGNCI-VLPCVGSPQKKL---RGLEKANGSATTVDSATECCNDPLLLDFTS------PTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKV

Query:  KIVVTKEQFKLLLANAKKLQSRHRLLSYTGPHK-GCQKWRPTLSAISEEV
        KIVVT++Q +LLL N+K+L+ R   + ++   K G +KW+P+L  I E +
Subjt:  KIVVTKEQFKLLLANAKKLQSRHRLLSYTGPHK-GCQKWRPTLSAISEEV

A0A6J5UND5 Uncharacterized protein5.1e-0639.18Show/hide
Query:  PTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFKLLLANAKKLQSRHRL---LSYTGPHKGCQKWRPTLSAISEEVDF
        P  T L+ GEV ++VP L  L   L  +KI + +      +K+KIVVT+EQ +LLL +A K +S   +   LS     +G  KWRP+L+ I E   F
Subjt:  PTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFKLLLANAKKLQSRHRL---LSYTGPHKGCQKWRPTLSAISEEVDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTGCATTGTCTTGCCTTGTGTCGGGTCGCCACAGAAGAAGCTCAGAGGGCTCGAAAAAGCCAATGGTTCTGCTACAACTGTTGATTCTGCTACCGAATGCTG
TAATGACCCTCTTCTCCTTGATTTTACTTCTCCAACCAGAACTAGCCTCCAAGTTGGGGAGGTTCAAAATGTTGTTCCATGCTTGAAAGAGCTCGAAAATCTTCTGGCTT
CCGCAAAGATAGCTTACTCGGATGGAGCAGGAGCAGGAGCAAGGAAGGTGAAGATTGTGGTAACTAAAGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGCTGCAA
TCTCGACATAGATTGTTGAGCTATACAGGCCCCCATAAAGGGTGTCAAAAATGGCGACCAACGTTGTCTGCAATCTCGGAGGAAGTAGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACTGCATTGTCTTGCCTTGTGTCGGGTCGCCACAGAAGAAGCTCAGAGGGCTCGAAAAAGCCAATGGTTCTGCTACAACTGTTGATTCTGCTACCGAATGCTG
TAATGACCCTCTTCTCCTTGATTTTACTTCTCCAACCAGAACTAGCCTCCAAGTTGGGGAGGTTCAAAATGTTGTTCCATGCTTGAAAGAGCTCGAAAATCTTCTGGCTT
CCGCAAAGATAGCTTACTCGGATGGAGCAGGAGCAGGAGCAAGGAAGGTGAAGATTGTGGTAACTAAAGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGCTGCAA
TCTCGACATAGATTGTTGAGCTATACAGGCCCCCATAAAGGGTGTCAAAAATGGCGACCAACGTTGTCTGCAATCTCGGAGGAAGTAGATTTTTGA
Protein sequenceShow/hide protein sequence
MGNCIVLPCVGSPQKKLRGLEKANGSATTVDSATECCNDPLLLDFTSPTRTSLQVGEVQNVVPCLKELENLLASAKIAYSDGAGAGARKVKIVVTKEQFKLLLANAKKLQ
SRHRLLSYTGPHKGCQKWRPTLSAISEEVDF