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Lsi02G011570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G011570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:13946960..13947247
RNA-Seq ExpressionLsi02G011570
SyntenyLsi02G011570
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042343.1 hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa]2.4e-3891.58Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ
        MDIQ K+LQHKDQITVVAAVSVVLSLFVY APRFLSILAFFWPLFASTAVLLVVM AFGGGFQVG+E+HG+RAGEGILDYVAGRPE GENHYKYQ
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ

KAG6573520.1 hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3488.17Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ
        IQTKVLQHKDQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGGGFQVGTEVHG +AGE ILDYVAGRPEY E  YKYQ
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2778.35Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMI-AFGGGFQVGTEVHGVR-AGEGILDYVAGRPEYGENHYKYQ
        MD+QTKVLQ+KDQITVVAAVSVVLSLF          LAFFWPLFASTA LLV MI AF GGFQVGT++HGVR AGEGILDYVAGRPEYG+NHYKY+
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMI-AFGGGFQVGTEVHGVR-AGEGILDYVAGRPEYGENHYKYQ

KAG7012637.1 hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-3589.25Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ
        IQTKVLQHKDQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGGGFQVGTEVHG RAGE ILDYVAGRPEY E  YKYQ
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ

KGN64996.1 hypothetical protein Csa_022896 [Cucumis sativus]1.4e-3892.63Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ
        MDI  KVLQHKDQ+TVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVM AFGGGFQVGTE+HG+RAGEGILDYVAGRPE GENHYKYQ
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ

TrEMBL top hitse value%identityAlignment
A0A061GGG1 Uncharacterized protein1.6e-1952.63Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ
        MDIQ K++Q++   T+    S +++  +Y APR L+IL +FWPLFAST V LV +IAFGGG Q+ TEVHG +AG+G++DYVA RPE+ E   K++
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ

A0A0A0LYI8 Uncharacterized protein6.9e-3992.63Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ
        MDI  KVLQHKDQ+TVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVM AFGGGFQVGTE+HG+RAGEGILDYVAGRPE GENHYKYQ
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ

A0A2N9EZM9 Uncharacterized protein1.6e-1960.92Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY
        MDI  K+LQ++  +T+ A V +VLSL +YAAPR ++ILAFFWPLFASTAVLL+ ++AFGG  Q  TE HG +AG+GIL+YV G+PE+
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY

A0A5D3CU44 Uncharacterized protein1.2e-3891.58Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ
        MDIQ K+LQHKDQITVVAAVSVVLSLFVY APRFLSILAFFWPLFASTAVLLVVM AFGGGFQVG+E+HG+RAGEGILDYVAGRPE GENHYKYQ
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ

I1MFR0 Uncharacterized protein1.1e-1759.77Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY
        MDI  K+LQ++  IT+   VS+  SLF+YAAP FL+ILA+FWPLFAST V LV +IAFGG  ++  E HG +AGEG+LDYVA R E+
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein7.6e-0637.36Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQV---GTEVHGVRAG-----EGILDYVAG
        M+ + K+L+ K QI     +S++    V  +P FL++L++FWPLF STA+ L  +  F     +    T + G  AG     EGILDYV G
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQV---GTEVHGVRAG-----EGILDYVAG

AT4G16400.1 unknown protein1.4e-1551.16Show/hide
Query:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPE
        M+IQ K+++++    V   VSV+++  VYAAPR L+ILA+FWPLFASTA  L + I FGG  Q+  E      GE ++DYVAGRPE
Subjt:  MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCAAACAAAGGTTCTCCAACACAAAGACCAAATAACTGTTGTAGCAGCAGTTTCAGTGGTTCTGTCATTGTTTGTATATGCAGCCCCTCGGTTTCTAAGTAT
TCTAGCTTTCTTTTGGCCTCTCTTTGCCTCCACAGCCGTACTCTTGGTGGTAATGATCGCCTTTGGAGGCGGTTTCCAAGTCGGAACCGAAGTTCATGGTGTAAGAGCAG
GTGAAGGGATTCTAGATTATGTCGCAGGACGACCTGAATATGGCGAAAACCACTATAAGTACCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCAAACAAAGGTTCTCCAACACAAAGACCAAATAACTGTTGTAGCAGCAGTTTCAGTGGTTCTGTCATTGTTTGTATATGCAGCCCCTCGGTTTCTAAGTAT
TCTAGCTTTCTTTTGGCCTCTCTTTGCCTCCACAGCCGTACTCTTGGTGGTAATGATCGCCTTTGGAGGCGGTTTCCAAGTCGGAACCGAAGTTCATGGTGTAAGAGCAG
GTGAAGGGATTCTAGATTATGTCGCAGGACGACCTGAATATGGCGAAAACCACTATAAGTACCAATAA
Protein sequenceShow/hide protein sequence
MDIQTKVLQHKDQITVVAAVSVVLSLFVYAAPRFLSILAFFWPLFASTAVLLVVMIAFGGGFQVGTEVHGVRAGEGILDYVAGRPEYGENHYKYQ