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Lsi02G011840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G011840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein CLAVATA 3
Genome locationchr02:14871358..14873606
RNA-Seq ExpressionLsi02G011840
SyntenyLsi02G011840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054350.1 protein CLAVATA 3 [Cucumis melo var. makuwa]3.5e-1474.55Show/hide
Query:  ISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        +SRK++ EMKK++EEG  GGK  R   EWEQLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  ISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

KAE8652825.1 hypothetical protein Csa_022700, partial [Cucumis sativus]1.3e-2476.62Show/hide
Query:  CCWRVARCRCVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        CCWRV RCR VSGKL VSRAL +SRK+L EMKK++EEG  GGK      EWEQLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  CCWRVARCRCVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

KAG6583691.1 hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1464.38Show/hide
Query:  VARCRCVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        + R R V    P+ RALQ +RK+L+EM K++E  V+GG+ +RP VEW+QLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  VARCRCVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

XP_038877536.1 protein CLAVATA 3 [Benincasa hispida]2.7e-2782.28Show/hide
Query:  CCWRVA--RCRCVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        CCWRVA  RCRCVSGK PVSRALQISRK+LQEMKK++EEGV+G K   P  EWEQLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  CCWRVA--RCRCVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

XP_040994604.1 uncharacterized protein LOC121241070 [Juglans microcarpa x Juglans regia]1.2e-0651.28Show/hide
Query:  SGKLPVSRALQISRKILQEMKKKIE------------EGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        + K  VS   + SRK+L  +K+K E             G NGG  Q     WE LRRVPSGPDPLHHNGGNP KPRTP
Subjt:  SGKLPVSRALQISRKILQEMKKKIE------------EGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

TrEMBL top hitse value%identityAlignment
A0A2G9GZD0 Uncharacterized protein1.7e-0657.14Show/hide
Query:  ISRKILQEMKK-KIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        + RK+  EMKK  ++ G      +  P +WE LRRVP+GPDPLHHNG NPKKPRTP
Subjt:  ISRKILQEMKK-KIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

A0A2I4FDL8 uncharacterized protein LOC1089978152.2e-0652.63Show/hide
Query:  KLPVSRALQISRKILQEMKKKIE------------EGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        K  VS   + SRK+L  +K K E             G NGG  Q     WE LRRVPSGPDPLHHNGGNP KPRTP
Subjt:  KLPVSRALQISRKILQEMKKKIE------------EGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

A0A5A7UGG1 Protein CLAVATA 31.7e-1474.55Show/hide
Query:  ISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP
        +SRK++ EMKK++EEG  GGK  R   EWEQLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  ISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP

A0A7J8RNZ0 Uncharacterized protein2.9e-0652.24Show/hide
Query:  CVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRT
        CVSG          +RKIL    K+    + G       VEWE LR VPSGPDPLHHNGG+PKKPRT
Subjt:  CVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRT

A0A7J8WB42 Uncharacterized protein2.9e-0652.24Show/hide
Query:  CVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRT
        CVSG          +RKIL    K+    + G       VEWE LR VPSGPDPLHHNGG+PKKPRT
Subjt:  CVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGCTGTTGGAGAGTTGCCCGATGCCGTTGCGTTTCCGGTAAGCTGCCCGTCTCTCGGGCGCTTCAAATCAGCCGGAAGATTCTTCAAGAGATGAAAAAGAAAAT
AGAAGAGGGAGTTAATGGCGGCAAGACACAGCGGCCGCCGGTGGAGTGGGAGCAGTTGCGGCGGGTGCCGTCGGGACCCGACCCATTACACCATAATGGTGGAAACCCGA
AAAAGCCTAGAACTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGCTGTTGGAGAGTTGCCCGATGCCGTTGCGTTTCCGGTAAGCTGCCCGTCTCTCGGGCGCTTCAAATCAGCCGGAAGATTCTTCAAGAGATGAAAAAGAAAAT
AGAAGAGGGAGTTAATGGCGGCAAGACACAGCGGCCGCCGGTGGAGTGGGAGCAGTTGCGGCGGGTGCCGTCGGGACCCGACCCATTACACCATAATGGTGGAAACCCGA
AAAAGCCTAGAACTCCTTGA
Protein sequenceShow/hide protein sequence
MDCCWRVARCRCVSGKLPVSRALQISRKILQEMKKKIEEGVNGGKTQRPPVEWEQLRRVPSGPDPLHHNGGNPKKPRTP