; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G011860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G011860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr02:14916466..14917392
RNA-Seq ExpressionLsi02G011860
SyntenyLsi02G011860
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583697.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.8e-16092.51Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKPQ+IIPFYAALL+ACSST N  TLKQIHALTIRLGISHHDFIRTKLASTYAAC  L QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS K IDRHTLPPV+KSCTGLSSLRLGRQVHGA+VINGFS DLPNLNALITMYGKCGDLGVARKVFDGMP RNEVSWSALMAGYGVHGMF +VFGLFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM MGFDLRPGL+HYTCMVDLLGRVG+VEEAEKLIMEMEIEPDEALWGALLSACRIHGK EVADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQ
        Q RFI Q
Subjt:  QKRFINQ

KAG7019344.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-15992.18Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKPQ+IIPFYAALL+ACSST N  TLKQIHALTIRLGISHHDFIRTKLASTYAAC  L QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS K IDRHTLPPV+KSCTGLSSLRLGRQVHGA+VINGFS DLPNLNALITMYGKCGDLGVARKVFDGMP RNEVSWSALMAGYGVHGMF +VFGLFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM MGFDLRPGL+HYTCMVDLLGRVG+VEEAEKLIMEMEIEPDEALWGALLSACRIHGK EVADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQ
        Q RF+ Q
Subjt:  QKRFINQ

XP_004144516.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sativus]1.1e-15992.21Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKP EIIPFYAALL+ACSSTNNLHTLKQIHALTI L ISHH FIRTKLASTYAACAQL QATTIFSFATRRPTYLFN LIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS KSIDRHTLPPVLKSCTGLSSLRLGRQVHGAL+INGFSADLP+LNALITMYGKCGDLGVARKVFDGMP RNEVSWSALMAGYGVHGMFG+VF LFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MVEEGQKPDELTFT+LLTACSHGGLIE+GKEYFGMMRM F LRPGLQHYTCMVDLLGR G+VEEAEKLIMEMEIEPDEALWGA+LSACRIHGK +VADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQE
        QKRFI Q+
Subjt:  QKRFINQE

XP_023520705.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo]4.8e-16092.18Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKPQ+IIPFYAALL+ACSST N  TLKQIHALTIRLGISHHDFIRTKLASTYAAC  L QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        L+S K IDRHTLPPVLKSCTGLSSLRLGRQVHGA+VINGFS DLPNLNALITMYGKCGDLGVARKVFDGMP RNEVSWSALMAGYGVHGMFG+VFGLFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGFDLRPGL+HYTCMVDLLGRVG+VEEAEKLIMEMEIEPDEALWGALL ACRIHGK EVADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQ
        Q RF+ Q
Subjt:  QKRFINQ

XP_038877225.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benincasa hispida]1.8e-15992.53Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKPQEIIPFYAALLEACS+T NLHTLKQIHALTIR  ISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLSRKS D+HT PPVLKSCTGLSSLRLGRQVHGAL+INGFSADLP+LNALITMY KCGDLGVARKVFD MP RN VSWSALMAGYGVHGMFG VFGLFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        +VEEGQKPDELTFTALLTACSHGGLIER KEYFGMMRM FDLRPGL+HYTCMVDLLGRVG+VEEAEKLIMEMEIEPDEALWGALLSACRIH KTEVA RV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQE
        QKRFINQ+
Subjt:  QKRFINQE

TrEMBL top hitse value%identityAlignment
A0A0A0K1F7 Uncharacterized protein5.1e-16092.21Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKP EIIPFYAALL+ACSSTNNLHTLKQIHALTI L ISHH FIRTKLASTYAACAQL QATTIFSFATRRPTYLFN LIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS KSIDRHTLPPVLKSCTGLSSLRLGRQVHGAL+INGFSADLP+LNALITMYGKCGDLGVARKVFDGMP RNEVSWSALMAGYGVHGMFG+VF LFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MVEEGQKPDELTFT+LLTACSHGGLIE+GKEYFGMMRM F LRPGLQHYTCMVDLLGR G+VEEAEKLIMEMEIEPDEALWGA+LSACRIHGK +VADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQE
        QKRFI Q+
Subjt:  QKRFINQE

A0A1S3C0K0 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like4.6e-15388.64Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKP EIIPFYAALLEACSST NLHTLKQIHALTI L ISHH FIRTKLASTYAACAQL QA TIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS KS DRHT P VLKSCTGLSSLRLGRQVHGAL+INGFSADLP+LNALITMY KCGDLGVARKVFDGMP RN VSWSALMAGYGVHGMFG+VF LFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MV+EGQ+PDELTFT+LLTACSHGGLIE+GKEYF  MRM F LRPGLQHYTCMVDLLGR+G+VEEAEKLIMEME+EPDEALWGA+LSACRIHG+ +VADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQE
        QKRFI Q+
Subjt:  QKRFINQE

A0A5A7UT42 Pentatricopeptide repeat-containing protein7.2e-15488.96Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKP EIIPFYAALLEACSST NLHTLKQIHALTI L ISHH FIRTKLASTYAACAQL QA TIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS KS DRHT P VLKSCTGLSSLRLGRQVHGAL+INGFSADLP+LNALITMY KCGDLGVARKVFDGMP RNEVSWSALMAGYGVHGMFG+VF LFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MV+EGQ+PDELTFT+LLTACSHGGLIE+GKEYF  MRM F LRPGLQHYTCMVDLLGR+G+VEEAEKLIMEME+EPDEALWGA+LSACRIHG+ +VADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQE
        QKRFI Q+
Subjt:  QKRFINQE

A0A6J1EHW3 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like7.4e-15991.86Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKPQ+IIPFYAALL+ACSST N  TLKQIHALTIRLGISHHDFIRTKLASTYAAC  L QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS K IDRHTLPPV+KSCTGLSSLRLGRQVHGA+VINGFS DLPNLNALITMYGKCGDLGVARKVFDGMP RNEVSWSALMAGYGVHGMF +VFGLFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV
        MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGFDLRPGL+HYTCMVDLLGRVG+VEEAEKLIMEMEIEPDEALWGALLSACRIHGK EVADRV
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRV

Query:  QKRFINQ
        Q RF+ Q
Subjt:  QKRFINQ

A0A6J1I7X0 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like7.4e-15991.26Show/hide
Query:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM
        MPKPQ+IIPFYAALL+ACSST N HTLKQIHALTIRLGISHHDFIRTKLASTYAAC  L QATTIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFRHM
Subjt:  MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHM

Query:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER
        LLS K IDRHTLPPVLKSCTGLSSLRLGRQVHG +VINGFS DLPNLNALITMYGKCGDLG+ARKVFDGMP RNEVSWSALMAGYGVHGMFG+VFGLFER
Subjt:  LLSRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFER

Query:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLI--MEMEIEPDEALWGALLSACRIHGKTEVAD
        MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGF+L+PGL+HYTCMVDLLGRVG+VEEAEKLI  MEMEIEPDEALWGALLSACRIHGK EVAD
Subjt:  MVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLI--MEMEIEPDEALWGALLSACRIHGKTEVAD

Query:  RVQKRFINQ
        RVQ RF+ Q
Subjt:  RVQKRFINQ

SwissProt top hitse value%identityAlignment
P93005 Pentatricopeptide repeat-containing protein At2g336801.7e-5138.1Show/hide
Query:  KPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLL
        KP E       +L ACS    L   KQ+H+  ++LG   H F  T L   YA    L  A   F     R   L+ +LI  +       ++L ++R M  
Subjt:  KPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLL

Query:  SRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMV
        +    +  T+  VLK+C+ L++L LG+QVHG  + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   +   LFE M+
Subjt:  SRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMV

Query:  EEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEV
         EG +PD++TF  +++ACSH G +ERG  YF MM     L P + HY CMVDLL R G+++EA++ I    I+    LW  LLSAC+ HGK E+
Subjt:  EEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEV

Q9LND4 Pentatricopeptide repeat-containing protein At1g06140, mitochondrial1.1e-5335.14Show/hide
Query:  LLEACSSTNNLHTLKQIHALTIRLG-ISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTL
        L++AC +       K +H ++IR   I   D+++  +   Y  C  L  A  +F  +  R   ++  LI   +      ++  +FR ML      ++ TL
Subjt:  LLEACSSTNNLHTLKQIHALTIRLG-ISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTL

Query:  PPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELT
          +L SC+ L SLR G+ VHG ++ NG   D  N  + I MY +CG++ +AR VFD MP RN +SWS+++  +G++G+F +    F +M  +   P+ +T
Subjt:  PPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELT

Query:  FTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRFINQE
        F +LL+ACSH G ++ G + F  M   + + P  +HY CMVDLLGR GE+ EA+  I  M ++P  + WGALLSACRIH + ++A  + ++ ++ E
Subjt:  FTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRFINQE

Q9LR69 Pentatricopeptide repeat-containing protein At1g035401.7e-5133.78Show/hide
Query:  YAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRH
        +  +L AC +   L   K+IH   I  GI  +  + + L   Y  C  +R+A  +F+  +++ +  ++AL+  +       +++ IFR M    +  D +
Subjt:  YAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRH

Query:  TLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDE
            VLK+C GL+++RLG+++HG  V  G   ++   +ALI +YGK G +  A +V+  M +RN ++W+A+++    +G   +    F  MV++G KPD 
Subjt:  TLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDE

Query:  LTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHG-KTEVADRVQKRFINQE
        ++F A+LTAC H G+++ G+ YF +M   + ++PG +HY+CM+DLLGR G  EEAE L+   E   D +LWG LL  C  +   + VA+R+ KR +  E
Subjt:  LTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHG-KTEVADRVQKRFINQE

Q9LW63 Putative pentatricopeptide repeat-containing protein At3g233305.8e-5236.23Show/hide
Query:  KQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTLPPVLKSCTGLSSLRL
        K+IH   IR GI    +I + L   YA  A++  +  +FS    R    +N+L+  +     ++++L +FR M+ ++          V+ +C  L++L L
Subjt:  KQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTLPPVLKSCTGLSSLRL

Query:  GRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELTFTALLTACSHGGLIE
        G+Q+HG ++  GF +++   +AL+ MY KCG++  ARK+FD M V +EVSW+A++ G+ +HG   +   LFE M  +G KP+++ F A+LTACSH GL++
Subjt:  GRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELTFTALLTACSHGGLIE

Query:  RGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKR
            YF  M   + L   L+HY  + DLLGR G++EEA   I +M +EP  ++W  LLS+C +H   E+A++V ++
Subjt:  RGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKR

Q9STF3 Pentatricopeptide repeat-containing protein At3g46790, chloroplastic2.1e-5738.49Show/hide
Query:  YAALLEAC----SSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRK-
        Y  +L+AC     + N+L   K+IHA   R G S H +I T L   YA    +  A+ +F     R    ++A+I  ++      ++L  FR M+   K 
Subjt:  YAALLEAC----SSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRK-

Query:  -SIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEE
         S +  T+  VL++C  L++L  G+ +HG ++  G  + LP ++AL+TMYG+CG L V ++VFD M  R+ VSW++L++ YGVHG   K   +FE M+  
Subjt:  -SIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEE

Query:  GQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRF
        G  P  +TF ++L ACSH GL+E GK  F  M     ++P ++HY CMVDLLGR   ++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R  +R 
Subjt:  GQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRF

Query:  INQE
           E
Subjt:  INQE

Arabidopsis top hitse value%identityAlignment
AT1G03540.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.2e-5233.78Show/hide
Query:  YAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRH
        +  +L AC +   L   K+IH   I  GI  +  + + L   Y  C  +R+A  +F+  +++ +  ++AL+  +       +++ IFR M    +  D +
Subjt:  YAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRH

Query:  TLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDE
            VLK+C GL+++RLG+++HG  V  G   ++   +ALI +YGK G +  A +V+  M +RN ++W+A+++    +G   +    F  MV++G KPD 
Subjt:  TLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDE

Query:  LTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHG-KTEVADRVQKRFINQE
        ++F A+LTAC H G+++ G+ YF +M   + ++PG +HY+CM+DLLGR G  EEAE L+   E   D +LWG LL  C  +   + VA+R+ KR +  E
Subjt:  LTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHG-KTEVADRVQKRFINQE

AT1G06140.1 Pentatricopeptide repeat (PPR) superfamily protein7.5e-5535.14Show/hide
Query:  LLEACSSTNNLHTLKQIHALTIRLG-ISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTL
        L++AC +       K +H ++IR   I   D+++  +   Y  C  L  A  +F  +  R   ++  LI   +      ++  +FR ML      ++ TL
Subjt:  LLEACSSTNNLHTLKQIHALTIRLG-ISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTL

Query:  PPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELT
          +L SC+ L SLR G+ VHG ++ NG   D  N  + I MY +CG++ +AR VFD MP RN +SWS+++  +G++G+F +    F +M  +   P+ +T
Subjt:  PPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELT

Query:  FTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRFINQE
        F +LL+ACSH G ++ G + F  M   + + P  +HY CMVDLLGR GE+ EA+  I  M ++P  + WGALLSACRIH + ++A  + ++ ++ E
Subjt:  FTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRFINQE

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-5238.1Show/hide
Query:  KPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLL
        KP E       +L ACS    L   KQ+H+  ++LG   H F  T L   YA    L  A   F     R   L+ +LI  +       ++L ++R M  
Subjt:  KPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLL

Query:  SRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMV
        +    +  T+  VLK+C+ L++L LG+QVHG  + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   +   LFE M+
Subjt:  SRKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMV

Query:  EEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEV
         EG +PD++TF  +++ACSH G +ERG  YF MM     L P + HY CMVDLL R G+++EA++ I    I+    LW  LLSAC+ HGK E+
Subjt:  EEGQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEV

AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.1e-5336.23Show/hide
Query:  KQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTLPPVLKSCTGLSSLRL
        K+IH   IR GI    +I + L   YA  A++  +  +FS    R    +N+L+  +     ++++L +FR M+ ++          V+ +C  L++L L
Subjt:  KQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRHTLPPVLKSCTGLSSLRL

Query:  GRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELTFTALLTACSHGGLIE
        G+Q+HG ++  GF +++   +AL+ MY KCG++  ARK+FD M V +EVSW+A++ G+ +HG   +   LFE M  +G KP+++ F A+LTACSH GL++
Subjt:  GRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELTFTALLTACSHGGLIE

Query:  RGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKR
            YF  M   + L   L+HY  + DLLGR G++EEA   I +M +EP  ++W  LLS+C +H   E+A++V ++
Subjt:  RGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKR

AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.5e-5838.49Show/hide
Query:  YAALLEAC----SSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRK-
        Y  +L+AC     + N+L   K+IHA   R G S H +I T L   YA    +  A+ +F     R    ++A+I  ++      ++L  FR M+   K 
Subjt:  YAALLEAC----SSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRK-

Query:  -SIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEE
         S +  T+  VL++C  L++L  G+ +HG ++  G  + LP ++AL+TMYG+CG L V ++VFD M  R+ VSW++L++ YGVHG   K   +FE M+  
Subjt:  -SIDRHTLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEE

Query:  GQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRF
        G  P  +TF ++L ACSH GL+E GK  F  M     ++P ++HY CMVDLLGR   ++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R  +R 
Subjt:  GQKPDELTFTALLTACSHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRF

Query:  INQE
           E
Subjt:  INQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAACCACAAGAAATAATTCCCTTCTATGCCGCTCTTCTCGAAGCATGCTCCTCCACCAACAACCTTCATACCCTCAAGCAAATCCACGCTCTAACTATAAGACT
CGGAATCTCTCACCATGATTTCATTCGAACCAAGCTAGCCTCCACCTACGCCGCCTGCGCTCAACTCCGACAAGCCACCACCATCTTCTCCTTCGCCACTCGCCGCCCCA
CCTACCTCTTCAATGCCCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCCCAATCCCTCTCCATTTTTCGCCACATGCTTCTTTCTCGAAAATCCATTGACCGTCAT
ACTCTCCCGCCGGTGCTCAAATCATGTACCGGCCTCTCGTCCTTACGCCTTGGCCGCCAGGTTCATGGGGCTCTTGTCATTAATGGGTTCTCTGCAGATTTGCCGAATTT
GAATGCTTTGATTACCATGTATGGCAAGTGCGGGGACTTGGGTGTTGCACGGAAGGTGTTCGATGGAATGCCTGTCAGGAATGAGGTGTCGTGGTCGGCGTTGATGGCGG
GTTATGGTGTTCATGGGATGTTTGGGAAGGTGTTTGGATTGTTTGAGAGGATGGTGGAAGAGGGGCAAAAGCCGGATGAGCTCACTTTTACAGCTCTTCTCACGGCGTGT
AGCCATGGAGGGTTGATTGAGAGAGGGAAGGAGTATTTTGGTATGATGAGAATGGGGTTTGATTTGAGGCCTGGGTTGCAACATTATACCTGTATGGTGGATTTGCTTGG
GAGGGTGGGGGAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGATTGAGCCTGATGAGGCTTTGTGGGGAGCTCTGTTGAGTGCTTGTAGGATTCATGGGAAGA
CCGAGGTGGCTGATAGGGTGCAAAAACGGTTTATCAACCAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAACCACAAGAAATAATTCCCTTCTATGCCGCTCTTCTCGAAGCATGCTCCTCCACCAACAACCTTCATACCCTCAAGCAAATCCACGCTCTAACTATAAGACT
CGGAATCTCTCACCATGATTTCATTCGAACCAAGCTAGCCTCCACCTACGCCGCCTGCGCTCAACTCCGACAAGCCACCACCATCTTCTCCTTCGCCACTCGCCGCCCCA
CCTACCTCTTCAATGCCCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCCCAATCCCTCTCCATTTTTCGCCACATGCTTCTTTCTCGAAAATCCATTGACCGTCAT
ACTCTCCCGCCGGTGCTCAAATCATGTACCGGCCTCTCGTCCTTACGCCTTGGCCGCCAGGTTCATGGGGCTCTTGTCATTAATGGGTTCTCTGCAGATTTGCCGAATTT
GAATGCTTTGATTACCATGTATGGCAAGTGCGGGGACTTGGGTGTTGCACGGAAGGTGTTCGATGGAATGCCTGTCAGGAATGAGGTGTCGTGGTCGGCGTTGATGGCGG
GTTATGGTGTTCATGGGATGTTTGGGAAGGTGTTTGGATTGTTTGAGAGGATGGTGGAAGAGGGGCAAAAGCCGGATGAGCTCACTTTTACAGCTCTTCTCACGGCGTGT
AGCCATGGAGGGTTGATTGAGAGAGGGAAGGAGTATTTTGGTATGATGAGAATGGGGTTTGATTTGAGGCCTGGGTTGCAACATTATACCTGTATGGTGGATTTGCTTGG
GAGGGTGGGGGAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGATTGAGCCTGATGAGGCTTTGTGGGGAGCTCTGTTGAGTGCTTGTAGGATTCATGGGAAGA
CCGAGGTGGCTGATAGGGTGCAAAAACGGTTTATCAACCAAGAATGA
Protein sequenceShow/hide protein sequence
MPKPQEIIPFYAALLEACSSTNNLHTLKQIHALTIRLGISHHDFIRTKLASTYAACAQLRQATTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSRKSIDRH
TLPPVLKSCTGLSSLRLGRQVHGALVINGFSADLPNLNALITMYGKCGDLGVARKVFDGMPVRNEVSWSALMAGYGVHGMFGKVFGLFERMVEEGQKPDELTFTALLTAC
SHGGLIERGKEYFGMMRMGFDLRPGLQHYTCMVDLLGRVGEVEEAEKLIMEMEIEPDEALWGALLSACRIHGKTEVADRVQKRFINQE