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Lsi02G011950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G011950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
Genome locationchr02:15091951..15092214
RNA-Seq ExpressionLsi02G011950
SyntenyLsi02G011950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8735595.1 hypothetical protein F3Y22_tig00000340pilonHSYRG00721 [Hibiscus syriacus]8.5e-0648.53Show/hide
Query:  SEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRN
        SEP +Q  T+   +S  E    T+MVL+GC RCLMYVM S++D KCP+C +  LLD  N  N    RN
Subjt:  SEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRN

KAG6583700.1 hypothetical protein SDJN03_19632, partial [Cucurbita argyrosperma subsp. sororia]6.1e-2080.3Show/hide
Query:  SNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRNVVDISPDVAK
        S+S TEDATT+ MVLLGCT+CLMYVMSSK DLKCPKCNN TLLDV NLANQAS++N+VD+S DVAK
Subjt:  SNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRNVVDISPDVAK

OIT01184.1 hypothetical protein A4A49_22135 [Nicotiana attenuata]6.5e-0645.21Show/hide
Query:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKL-DLKCPKCNNNTLLDVFNLANQASRRNV
        +P S  +S D + AV   +    T T+MVL+GC RCLMYVM +++ D +CPKC +  LLDV    N+ +RRN+
Subjt:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKL-DLKCPKCNNNTLLDVFNLANQASRRNV

TYH76956.1 hypothetical protein ES332_D04G121400v1 [Gossypium tomentosum]1.1e-0551.61Show/hide
Query:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN
        +P S  +S ++     +S+  +ATTT+MVLLGC RCLMYVM S+ D KCPKC +  LLD  N
Subjt:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN

XP_039002217.1 uncharacterized protein LOC120128632 [Hibiscus syriacus]1.1e-0556.6Show/hide
Query:  DLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN
        D+T AV  +++ DAT+  MVL+GC RCL+YVM S+ D KCPKCN+  LLD  N
Subjt:  DLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN

TrEMBL top hitse value%identityAlignment
A0A1J6IKY6 Uncharacterized protein3.2e-0645.21Show/hide
Query:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKL-DLKCPKCNNNTLLDVFNLANQASRRNV
        +P S  +S D + AV   +    T T+MVL+GC RCLMYVM +++ D +CPKC +  LLDV    N+ +RRN+
Subjt:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKL-DLKCPKCNNNTLLDVFNLANQASRRNV

A0A2P5W242 Uncharacterized protein1.6e-0547.06Show/hide
Query:  SEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRN
        SEP +   T+   +S  E    T+MVL+GC RCLMYVM S++D KCP+C +  LLD  N  N    RN
Subjt:  SEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRN

A0A5D2LD87 Uncharacterized protein5.4e-0651.61Show/hide
Query:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN
        +P S  +S ++     +S+  +ATTT+MVLLGC RCLMYVM S+ D KCPKC +  LLD  N
Subjt:  NPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN

A0A6A3AD94 Uncharacterized protein5.4e-0656.6Show/hide
Query:  DLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN
        D+T AV  +++ DAT+  MVL+GC RCL+YVM S+ D KCPKCN+  LLD  N
Subjt:  DLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFN

A0A6A3D1E4 Uncharacterized protein4.1e-0648.53Show/hide
Query:  SEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRN
        SEP +Q  T+   +S  E    T+MVL+GC RCLMYVM S++D KCP+C +  LLD  N  N    RN
Subjt:  SEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRN

SwissProt top hitse value%identityAlignment
Q9FNI1 Protein GL2-INTERACTING REPRESSOR 18.8e-0648.39Show/hide
Query:  NPKSEPISQDLTL---AVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD
        +P S  +S ++     +V  ST+ +  TT+MVL+GC RCLMYVM S+ D KCPKC +  LLD
Subjt:  NPKSEPISQDLTL---AVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD

Q9SRN4 Protein GL2-INTERACTING REPRESSOR 25.2e-0647.37Show/hide
Query:  KSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD
        +S   S    ++   +  E+ T T+MVL+GC RCLMYVM S  D KCPKC +  LLD
Subjt:  KSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD

Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein3.7e-0747.37Show/hide
Query:  KSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD
        +S   S    ++   +  E+ T T+MVL+GC RCLMYVM S  D KCPKC +  LLD
Subjt:  KSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD

AT5G06270.1 unknown protein6.3e-0748.39Show/hide
Query:  NPKSEPISQDLTL---AVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD
        +P S  +S ++     +V  ST+ +  TT+MVL+GC RCLMYVM S+ D KCPKC +  LLD
Subjt:  NPKSEPISQDLTL---AVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGAAGATTCAACAATCCAAAATCAGAACCAATATCACAAGATCTAACGTTGGCAGTATCTAACTCGACAACCGAAGACGCCACAACAACGACCATGGTGCTACT
AGGGTGCACTCGATGCCTCATGTACGTCATGTCTTCTAAGTTAGATCTCAAATGTCCCAAATGTAACAACAATACATTGCTTGATGTATTCAATTTGGCAAATCAAGCAT
CTCGAAGAAATGTTGTCGATATCTCGCCTGACGTTGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGAAGATTCAACAATCCAAAATCAGAACCAATATCACAAGATCTAACGTTGGCAGTATCTAACTCGACAACCGAAGACGCCACAACAACGACCATGGTGCTACT
AGGGTGCACTCGATGCCTCATGTACGTCATGTCTTCTAAGTTAGATCTCAAATGTCCCAAATGTAACAACAATACATTGCTTGATGTATTCAATTTGGCAAATCAAGCAT
CTCGAAGAAATGTTGTCGATATCTCGCCTGACGTTGCTAAATGA
Protein sequenceShow/hide protein sequence
MGRRFNNPKSEPISQDLTLAVSNSTTEDATTTTMVLLGCTRCLMYVMSSKLDLKCPKCNNNTLLDVFNLANQASRRNVVDISPDVAK