; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G012030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCAP-Gly domain-containing linker protein 1-like
Genome locationchr02:15348734..15384089
RNA-Seq ExpressionLsi02G012030
SyntenyLsi02G012030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134206.1 CAP-Gly domain-containing linker protein 1 [Cucumis sativus]5.4e-2779.31Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QV+TYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ QHQH V + DKEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

XP_008438879.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo]5.4e-2779.31Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ QHQH   + DKEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

XP_022956216.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata]1.2e-2678.16Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ +HQH  E  +KEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

XP_023527984.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]4.1e-2779.31Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ +HQH  E  DKEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

XP_038878824.1 CAP-Gly domain-containing linker protein 1 isoform X1 [Benincasa hispida]1.8e-2781.18Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDA
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV V+ ++ QHQH VE+ DKEDA
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDA

TrEMBL top hitse value%identityAlignment
A0A1S3AXE8 CAP-Gly domain-containing linker protein 1 isoform X16.4e-2678.41Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLG-LQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLG LQDV VD ++ QHQH   + DKEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLG-LQDVFVDKDKNQHQHLVENIDKEDACE

A0A1S3AY29 CAP-Gly domain-containing linker protein 1 isoform X22.6e-2779.31Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ QHQH   + DKEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X22.6e-2779.31Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ QHQH   + DKEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

A0A6J1GVY7 CAP-Gly domain-containing linker protein 1-like5.8e-2778.16Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ +HQH  E  +KEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

A0A6J1IY17 CAP-Gly domain-containing linker protein 15.8e-2778.16Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE
        DLQNWRSKL+ QVNTYRSEL +LKKSLNVEVEHLRTEF+ELRTT QQQQEDVTTS+RNLGLQDV VD ++ +HQH  E  +KEDA E
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein1.7e-1551.16Show/hide
Query:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQD--VFVDKDKNQHQHLVENIDKED
        DLQ+WR KL+ QV  YR EL  LKK+LN+EVE LR EF++L+TT  QQQ+DV+ S+++LGLQD    +DK     +  VE +  +D
Subjt:  DLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQD--VFVDKDKNQHQHLVENIDKED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATATTCAAGGCATATAGTGGTAGCCTCCACCAATTAAAAGTGATAAAGAACGGAAATAGGATTTTATTTTCTTCTCCTCCGCATTCACGCTCAACCCTAGCTAC
TTTCTCCCTCTATACTCTCTTCTTCTCTTACAACTTCTTTTCTCAACCTCACGCCATTCGACAGCCACCTTCACCGCTTGCACCTATCGCCCGCTATTTTACCACCGATT
TGAACTCCATCCGAGCACCGTTGCCGAGTCTCCCAGCCAAGTCTCACCGACGCCGCCGTCTGCACAACCCAAGCCTTTGTCTCGCTCAGATCTTCATCATACTTATGCGT
ATAGAAATATTTTGGGATCTCCAGAATTGGAGGTCAAAGCTAGAAATGCAAGTTAATACCTACCGCAGTGAACTCTTCAAACTCAAGAAATCACTTAATGTTGAAGTGGA
ACACCTTCGCACGGAATTCGAAGAACTAAGGACTACCTTTCAACAGCAACAAGAAGATGTGACCACTAGCATGAGGAACTTGGGTCTGCAGGATGTTTTTGTGGACAAAG
ACAAGAATCAACATCAACATCTAGTGGAAAACATCGACAAGGAAGACGCATGCGAGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATATATTCAAGGCATATAGTGGTAGCCTCCACCAATTAAAAGTGATAAAGAACGGAAATAGGATTTTATTTTCTTCTCCTCCGCATTCACGCTCAACCCTAGCTAC
TTTCTCCCTCTATACTCTCTTCTTCTCTTACAACTTCTTTTCTCAACCTCACGCCATTCGACAGCCACCTTCACCGCTTGCACCTATCGCCCGCTATTTTACCACCGATT
TGAACTCCATCCGAGCACCGTTGCCGAGTCTCCCAGCCAAGTCTCACCGACGCCGCCGTCTGCACAACCCAAGCCTTTGTCTCGCTCAGATCTTCATCATACTTATGCGT
ATAGAAATATTTTGGGATCTCCAGAATTGGAGGTCAAAGCTAGAAATGCAAGTTAATACCTACCGCAGTGAACTCTTCAAACTCAAGAAATCACTTAATGTTGAAGTGGA
ACACCTTCGCACGGAATTCGAAGAACTAAGGACTACCTTTCAACAGCAACAAGAAGATGTGACCACTAGCATGAGGAACTTGGGTCTGCAGGATGTTTTTGTGGACAAAG
ACAAGAATCAACATCAACATCTAGTGGAAAACATCGACAAGGAAGACGCATGCGAGACTTAG
Protein sequenceShow/hide protein sequence
MYIFKAYSGSLHQLKVIKNGNRILFSSPPHSRSTLATFSLYTLFFSYNFFSQPHAIRQPPSPLAPIARYFTTDLNSIRAPLPSLPAKSHRRRRLHNPSLCLAQIFIILMR
IEIFWDLQNWRSKLEMQVNTYRSELFKLKKSLNVEVEHLRTEFEELRTTFQQQQEDVTTSMRNLGLQDVFVDKDKNQHQHLVENIDKEDACET