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Lsi02G012180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein LURP-one-related 7
Genome locationchr02:15783285..15784082
RNA-Seq ExpressionLsi02G012180
SyntenyLsi02G012180
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607355.1 Protein LURP-one-related 7, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1866.67Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS-PLISIYRVNNCDCWDLLK
        MANSSDPAIC+   PI VDLFL +KHPD+VT S GDI++RLSR+SLKS S+DKIVL DAA + PLISI+RVN  + W   K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS-PLISIYRVNNCDCWDLLK

XP_004139831.1 protein LURP-one-related 7 [Cucumis sativus]1.8e-1762.96Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK
        MAN SDPAICS A PI +DLFL ++HPDY+TNS GDI+YR++R +LKS SVDKI+L  A A  PLISI+RVN  + W+  K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK

XP_022948358.1 protein LURP-one-related 7 [Cucurbita moschata]4.7e-1864.63Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS--PLISIYRVNNCDCWDLLK
        MANSSDPAIC+ + PI VDLFL +KHPD+VT S GD ++RLSR+SLKS S+DKIVL DAA +  PLISI+RVN  + W   K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS--PLISIYRVNNCDCWDLLK

XP_023523465.1 protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo]1.8e-1763.1Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS----PLISIYRVNNCDCWDLLK
        MANSSDPAIC+   PI VDLFL +KHPD+VT S G+I++RLSR+SLKS S+DKIVL DAA +    PLISI+RVN  + W   K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS----PLISIYRVNNCDCWDLLK

XP_038884438.1 protein LURP-one-related 7 [Benincasa hispida]1.3e-2070.37Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS-PLISIYRVNNCDCWDLLK
        MANSSDPAICS A PI+VDLFL ++HPDY+TNS GDI+YR++R SLKS SVDKIVLLDAA + PLISI+RVN  + W   K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS-PLISIYRVNNCDCWDLLK

TrEMBL top hitse value%identityAlignment
A0A0A0K429 Uncharacterized protein8.7e-1862.96Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK
        MAN SDPAICS A PI +DLFL ++HPDY+TNS GDI+YR++R +LKS SVDKI+L  A A  PLISI+RVN  + W+  K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK

A0A1S3CIB3 protein LURP-one-related 71.6e-1659.26Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK
        MANSSDP ICS A PI +DLFL ++HP Y+TNS GDI+Y+++R + KS SVDKI+L  A A  PLISI+RVN  + W+  K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK

A0A5A7T6Q3 Protein LURP-one-related 71.6e-1659.26Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK
        MANSSDP ICS A PI +DLFL ++HP Y+TNS GDI+Y+++R + KS SVDKI+L  A A  PLISI+RVN  + W+  K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDA-AVSPLISIYRVNNCDCWDLLK

A0A6J1G943 protein LURP-one-related 72.3e-1864.63Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS--PLISIYRVNNCDCWDLLK
        MANSSDPAIC+ + PI VDLFL +KHPD+VT S GD ++RLSR+SLKS S+DKIVL DAA +  PLISI+RVN  + W   K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS--PLISIYRVNNCDCWDLLK

A0A6J1KES0 protein LURP-one-related 73.3e-1762.65Show/hide
Query:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS---PLISIYRVNNCDCWDLLK
        MA SSDPAIC+   PI VDLFL +KHPD+VT+S GDI++RLSR+ LKS S+DKIVL DAA +   PLISI+RVN  + W   K
Subjt:  MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVS---PLISIYRVNNCDCWDLLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTCTTCCGATCCTGCAATCTGCTCTATAGCTTTCCCAATCTCCGTTGATCTCTTCCTATTCAGAAAACATCCCGACTACGTAACTAATTCCTTCGGTGACAT
CGTTTATAGGCTCAGTCGTCGATCTTTGAAATCGTTGTCAGTTGACAAGATTGTACTACTTGACGCTGCTGTCAGCCCTCTCATTTCCATTTATCGCGTTAACAATTGTG
ATTGTTGGGATTTGTTAAAATTCCTTCACATTGGTCACTACATTCCAAATGAACCATCCCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATTCTTCCGATCCTGCAATCTGCTCTATAGCTTTCCCAATCTCCGTTGATCTCTTCCTATTCAGAAAACATCCCGACTACGTAACTAATTCCTTCGGTGACAT
CGTTTATAGGCTCAGTCGTCGATCTTTGAAATCGTTGTCAGTTGACAAGATTGTACTACTTGACGCTGCTGTCAGCCCTCTCATTTCCATTTATCGCGTTAACAATTGTG
ATTGTTGGGATTTGTTAAAATTCCTTCACATTGGTCACTACATTCCAAATGAACCATCCCTATAA
Protein sequenceShow/hide protein sequence
MANSSDPAICSIAFPISVDLFLFRKHPDYVTNSFGDIVYRLSRRSLKSLSVDKIVLLDAAVSPLISIYRVNNCDCWDLLKFLHIGHYIPNEPSL