CuGenDBv2

Gene ID	Lsi02G012210
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	28S ribosomal protein S29, mitochondrial
Genome location	chr02:15836471..15841476
RNA-Seq Expression	Lsi02G012210
Synteny	Lsi02G012210
Gene Ontology terms	GO:0005763 - mitochondrial small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR019368 - Ribosomal protein S23/S29, mitochondrial IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145300.3 28S ribosomal protein S29, mitochondrial [Cucumis sativus]

4.5e-199

79.13

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        M+RSILRATAAASK H  NR PSPILSLTSNYSAK +KS     KK KS+A+AK GDD SA AAAS+DLDA  SDDK RAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFK NME LNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLVQWAR+EG      PSG        F  N               ++DF+KYNET+LRQLPCQISEPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EG GVGM KGADSM MPEGSTLYDLIDTGIKHTH AVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQRLIRREAFSED WKKIYYLSNGNGAEMRWL PLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

XP_008457304.1 PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo]

5.9e-199

79.34

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRSILRATAAASK H CNR PSPILS TSNYSAK +K      KK KS+A+AK GDD SAS AASD+LDA  SDDK+RAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFKFNME LNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLV WAR+EG      PSG        F  N               ++DFLKYNE RLRQLPCQISEPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EGVGVGM KGADSM MP+GSTLYDLIDTGIKHTHAAVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQRLIRREAFSE+ WKKIYYLSNGNGAEMRWL PLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

XP_011657272.1 28S ribosomal protein S29, mitochondrial [Cucumis sativus]

3.1e-200

79.34

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRSILRAT+AASK H+CNR P+PILSLTSNYSAK +K      KK KS+A+AK GDD SASAAASDDLDA  SDDK RAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFK+NME LNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLVQWAR+EG      PSG        F  N               ++DFLKYNE +LRQLPCQI EPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EG GVGM KGADSM MPEGSTLYDLIDTGIKHTH AVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWL PLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

XP_022154896.1 28S ribosomal protein S29, mitochondrial [Momordica charantia]

1.5e-202

79.96

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSA---TKKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRS+LRA AAASK HLCNR PSPILSL+SNYSAK  KS    TKK KS A+AK  DD SA+AAASDDLDA  SDDKSRAR LAAEEND SLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSA---TKKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKD+GTYFKFNME LNEVLPEGLPLGMVKEFEESMRSAVLVR+SFL+LRDNFRRVVDPSL SP G+                      
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
               KIRKQIVLDGPVNCGKS ALAMLV WARDEG      PSG        F  N               ++DFLKYNETRLRQLPCQISEPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVV+RLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR+IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAF+EDAWKKIYYLSNGNGAEMRWLVPLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

XP_038895729.1 28S ribosomal protein S29, mitochondrial [Benincasa hispida]

1.0e-203

80.79

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSATKKA---KSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRSIL+ATAAASK HLCNR P PILSLTSNYSAK++KS+ KKA   KSKA+ K GDD SASAAA+DDLDA  SDDKSRAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSATKKA---KSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFKFNME LNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLV WARDEG      PSG        F  N               ++DFLKYNET LRQLPCQISEPI LG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EGVGVGMMKGADSMTMP+GSTLYDLIDTGIKHTHAAVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMV AFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL AR+NFPRYSLDEAASV HYYLRQRLIRREAFSED WKKIYYLSNGNGAEMRWLVPLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG66 Uncharacterized protein

1.5e-200

79.34

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRSILRAT+AASK H+CNR P+PILSLTSNYSAK +K      KK KS+A+AK GDD SASAAASDDLDA  SDDK RAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFK+NME LNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLVQWAR+EG      PSG        F  N               ++DFLKYNE +LRQLPCQI EPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EG GVGM KGADSM MPEGSTLYDLIDTGIKHTH AVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWL PLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

A0A0A0LVC2 Uncharacterized protein

2.8e-199

79.13

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        M+RSILRATAAASK H  NR PSPILSLTSNYSAK +KS     KK KS+A+AK GDD SA AAAS+DLDA  SDDK RAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFK NME LNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLVQWAR+EG      PSG        F  N               ++DF+KYNET+LRQLPCQISEPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EG GVGM KGADSM MPEGSTLYDLIDTGIKHTH AVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQRLIRREAFSED WKKIYYLSNGNGAEMRWL PLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

A0A1S3C6G8 28S ribosomal protein S29, mitochondrial

2.8e-199

79.34

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRSILRATAAASK H CNR PSPILS TSNYSAK +K      KK KS+A+AK GDD SAS AASD+LDA  SDDK+RAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFKFNME LNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLV WAR+EG      PSG        F  N               ++DFLKYNE RLRQLPCQISEPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EGVGVGM KGADSM MP+GSTLYDLIDTGIKHTHAAVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQRLIRREAFSE+ WKKIYYLSNGNGAEMRWL PLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

A0A5A7UZA8 28S ribosomal protein S29

2.8e-199

79.34

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRSILRATAAASK H CNR PSPILS TSNYSAK +K      KK KS+A+AK GDD SAS AASD+LDA  SDDK+RAR LAAEENDTSLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSAT---KKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKDAGTYFKFNME LNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPA                        
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
             GSKIRKQIVLDGPVNCGKSIALAMLV WAR+EG      PSG        F  N               ++DFLKYNE RLRQLPCQISEPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EGVGVGM KGADSM MP+GSTLYDLIDTGIKHTHAAVGVVVRLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQRLIRREAFSE+ WKKIYYLSNGNGAEMRWL PLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

A0A6J1DQ31 28S ribosomal protein S29, mitochondrial

7.2e-203

79.96

Show/hide

Query:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSA---TKKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP
        MLRS+LRA AAASK HLCNR PSPILSL+SNYSAK  KS    TKK KS A+AK  DD SA+AAASDDLDA  SDDKSRAR LAAEEND SLDVGPNGRP
Subjt:  MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSA---TKKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRP

Query:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI
        LFTSASSLSQLTRKD+GTYFKFNME LNEVLPEGLPLGMVKEFEESMRSAVLVR+SFL+LRDNFRRVVDPSL SP G+                      
Subjt:  LFTSASSLSQLTRKDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFI

Query:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG
               KIRKQIVLDGPVNCGKS ALAMLV WARDEG      PSG        F  N               ++DFLKYNETRLRQLPCQISEPIPLG
Subjt:  CTEVTGSKIRKQIVLDGPVNCGKSIALAMLVQWARDEG------PSGA-------FVMN---------------MQDFLKYNETRLRQLPCQISEPIPLG

Query:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD
        EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVV+RLR+ELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR+IHARELAMVKAFRSMMHD
Subjt:  EGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHD

Query:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
        DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAF+EDAWKKIYYLSNGNGAEMRWLVPLMR
Subjt:  DMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16870.1 mitochondrial 28S ribosomal protein S29-related

3.7e-135

57.68

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Query:  TSNYSAKISKSATKKAKSKANAKTGDDFSASAAASDDLDAGFSDD--KSRARNLAAEENDTSLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKFNMEALN
        +S+ S K S + TKK++ K +   G D  A+ A   +  A   DD    RA+ LA +E   SLDVGPNGRPLFT   ++LSQLT KD G+YFKF+  AL 
Subjt:  TSNYSAKISKSATKKAKSKANAKTGDDFSASAAASDDLDAGFSDD--KSRARNLAAEENDTSLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKFNMEALN

Query:  EVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFICTEVTGSKIRKQIVLDGPVNCGKSIALA
         VLPEGL  G+  EF ES R A+LVR+S+L LRDNFRR+ DP +                             ++  G K++KQIVLDGPV CGKSIALA
Subjt:  EVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFICTEVTGSKIRKQIVLDGPVNCGKSIALA

Query:  MLVQWARDEG-------------PSGAFVMN---------------MQDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDT
        MLV WARDEG               G F  N               ++DF+K+NE+RLR+L C+I +PI LGEG GVG +KGAD+M +PE STLYDL+  
Subjt:  MLVQWARDEG-------------PSGAFVMN---------------MQDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDT

Query:  GIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDAR
        GIK THAAV VVVRLR+ELS+VKD+PVLI IDQYN+WFTFSE+EEPVT RS R IHAREL  V AFRSMMH+DMMVGAFSHSTAVGKLR+DLPDVP+DAR
Subjt:  GIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDAR

Query:  VNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR
          FPRYSLDEA +V +YYLRQRL+RRE F+E+ WKKIYYL+NGNGAEMRWL P MR
Subjt:  VNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLVPLMR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGCGGTCAATTCTCAGAGCAACAGCCGCAGCCTCCAAACCCCACCTTTGCAATCGCTACCCTTCTCCGATCCTATCTCTTACTTCCAATTACTCTGCGAAGATCAG
CAAATCCGCCACTAAGAAGGCCAAGTCCAAGGCCAACGCCAAAACCGGTGATGACTTCTCCGCCTCTGCTGCTGCTTCCGACGACTTAGATGCGGGGTTTTCTGATGATA
AATCCCGCGCCCGCAATCTTGCTGCCGAGGAAAATGATACCTCACTCGATGTTGGCCCAAATGGCCGCCCACTCTTTACCTCCGCATCTTCACTCTCACAGCTGACTCGC
AAGGATGCAGGCACTTATTTCAAATTCAATATGGAAGCACTTAATGAGGTACTGCCGGAGGGTTTGCCGTTGGGGATGGTCAAGGAGTTTGAGGAGTCTATGCGAAGTGC
TGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGCGACAATTTCAGGCGCGTGGTTGATCCCTCATTGCTGTCACCGGCTGGTATTACTTTTCTTCTACTGTCTTTTCTTT
TGGGTGGGGGGCTTAAGCAAATGGTTCTCGTGTTGTTTATTTGTACCGAAGTGACTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCGGTTAACTGTGGAAAG
AGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGTGATGAAGGGCCTTCTGGTGCATTTGTTATGAATATGCAGGATTTTCTGAAGTACAATGAGACCCGGTTAAGACA
ATTGCCATGCCAAATATCTGAACCTATACCGTTGGGAGAGGGTGTTGGTGTTGGGATGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCTACTCTATACGACT
TAATTGATACTGGAATCAAGCACACTCATGCAGCCGTTGGGGTGGTAGTTCGTTTAAGAGAAGAACTATCGCTTGTGAAAGATATCCCTGTGCTCATTGCTATTGATCAA
TATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGATCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGAT
GCATGATGACATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGATGCACGTGTTAATTTCCCTCGCTATA
GTCTTGATGAAGCGGCTTCTGTTTTCCACTACTATCTCAGACAAAGACTGATACGGCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAAATATACTATTTGTCGAATGGA
AATGGAGCGGAAATGCGGTGGTTGGTACCATTGATGCGGTGA

mRNA sequence

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TAGAAGAAGGCGCACACTTCACAGAGTCCCGCAAAACCCAAAACCTCGCGTTCGTCCTCATTCCCATCTCCGACCGGCGGAAAATGTTGCGGTCAATTCTCAGAGCAACA
GCCGCAGCCTCCAAACCCCACCTTTGCAATCGCTACCCTTCTCCGATCCTATCTCTTACTTCCAATTACTCTGCGAAGATCAGCAAATCCGCCACTAAGAAGGCCAAGTC
CAAGGCCAACGCCAAAACCGGTGATGACTTCTCCGCCTCTGCTGCTGCTTCCGACGACTTAGATGCGGGGTTTTCTGATGATAAATCCCGCGCCCGCAATCTTGCTGCCG
AGGAAAATGATACCTCACTCGATGTTGGCCCAAATGGCCGCCCACTCTTTACCTCCGCATCTTCACTCTCACAGCTGACTCGCAAGGATGCAGGCACTTATTTCAAATTC
AATATGGAAGCACTTAATGAGGTACTGCCGGAGGGTTTGCCGTTGGGGATGGTCAAGGAGTTTGAGGAGTCTATGCGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGA
TCTCCGCGACAATTTCAGGCGCGTGGTTGATCCCTCATTGCTGTCACCGGCTGGTATTACTTTTCTTCTACTGTCTTTTCTTTTGGGTGGGGGGCTTAAGCAAATGGTTC
TCGTGTTGTTTATTTGTACCGAAGTGACTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCGGTTAACTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAA
TGGGCTCGTGATGAAGGGCCTTCTGGTGCATTTGTTATGAATATGCAGGATTTTCTGAAGTACAATGAGACCCGGTTAAGACAATTGCCATGCCAAATATCTGAACCTAT
ACCGTTGGGAGAGGGTGTTGGTGTTGGGATGATGAAAGGTGCTGATTCCATGACGATGCCTGAGGGTTCTACTCTATACGACTTAATTGATACTGGAATCAAGCACACTC
ATGCAGCCGTTGGGGTGGTAGTTCGTTTAAGAGAAGAACTATCGCTTGTGAAAGATATCCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAG
TATGAAGAACCAGTGACTGTTCGTTCAACTCGATCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGATGACATGATGGTTGGTGCTTT
CTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGATGCACGTGTTAATTTCCCTCGCTATAGTCTTGATGAAGCGGCTTCTGTTTTCC
ACTACTATCTCAGACAAAGACTGATACGGCGTGAAGCCTTCTCAGAGGATGCCTGGAAAAAAATATACTATTTGTCGAATGGAAATGGAGCGGAAATGCGGTGGTTGGTA
CCATTGATGCGGTGACACCAATGAGGCAGATTTCCTCCTCGCCTGCTTGACTGTGGTCTCGGTACCATCACTTAGTTCTCATTCAGATTCCTTCCCTCAGAATTGGATTT
CCCTAACCCTCTCACTCAAGATTCTACCTATCATAGGTTTGCTGCCCTCAAATACGGAGTCCACTGTTTGTATTTGTAAGTTAAGGGCCACATCGGAGAATTAACCTTTT
GTAAGCCACAATTTTTATACTCCACTTGGTTACACTTGTGCTCTTTCTTGTTTTTTAATTATATATTTTTATATACATTCTTCAATAAGCTGTCATCTTTAAAGGAAAAA
CTTAAGATACTTGCCCATTTTGTCC

Protein sequence

Show/hide protein sequence

MLRSILRATAAASKPHLCNRYPSPILSLTSNYSAKISKSATKKAKSKANAKTGDDFSASAAASDDLDAGFSDDKSRARNLAAEENDTSLDVGPNGRPLFTSASSLSQLTR
KDAGTYFKFNMEALNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGITFLLLSFLLGGGLKQMVLVLFICTEVTGSKIRKQIVLDGPVNCGK
SIALAMLVQWARDEGPSGAFVMNMQDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLREELSLVKDIPVLIAIDQ
YNNWFTFSEYEEPVTVRSTRSIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDAWKKIYYLSNG
NGAEMRWLVPLMR

Lsi02G012210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome