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Lsi02G012220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWound-induced protein 1
Genome locationchr02:15872780..15873400
RNA-Seq ExpressionLsi02G012220
SyntenyLsi02G012220
Gene Ontology termsNA
InterPro domainsIPR009798 - Wound-induced protein Wun1-like
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059984.1 putative Senescence associated protein 20 [Cucumis melo var. makuwa]1.6e-7583.72Show/hide
Query:  SLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDT
        +LSF+  P + ITKLAN EWS EQRESV RVRALY+ALG+KDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPIS+VP GPT+VLAEG+  
Subjt:  SLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDT

Query:  KRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAA-DGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL
        KRAVSWVHAWTITDG+ITHVKEYLNTSVTVKRF+SAA DGDSPS S PPNC+S+WQSKVW ES +PALVLAL
Subjt:  KRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAA-DGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL

KAG6607351.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6479.31Show/hide
Query:  VIGITKLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG-ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSW
        ++G TKLANSE  SEQ E SV  V ALY+AL SKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG +SSSFVFAPIS+V FGPT VLAEGYDTKRAVSW
Subjt:  VIGITKLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG-ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSW

Query:  VHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLP---------PNCQSVWQSKVWGESVVPALVLAL
        VHAWTITDG+ITHVKEYLNTSVTVKRFA+AAD +SPS+S P          NCQSVWQSKV GES VP LVLAL
Subjt:  VHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLP---------PNCQSVWQSKVWGESVVPALVLAL

KAG7037026.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-6479.31Show/hide
Query:  VIGITKLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG-ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSW
        ++G TKLANSE  SEQ E SV  V ALY+AL SKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG +SSSFVFAPIS+V FGPT VLAEGYDTKRAVSW
Subjt:  VIGITKLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG-ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSW

Query:  VHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLP---------PNCQSVWQSKVWGESVVPALVLAL
        VHAWTITDG+ITHVKEYLNTSVTVKRFA+AAD +SPS+S P          NCQSVWQSKV GES VP LVLAL
Subjt:  VHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLP---------PNCQSVWQSKVWGESVVPALVLAL

XP_017982445.1 PREDICTED: uncharacterized protein LOC18591051 [Theobroma cacao]4.9e-4560Show/hide
Query:  ANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDG
        A  E   E+  + R VRALY AL S+DVETVHRLLA DLEWWFHGPPSHQ+LMRLLTG++  F+F P+ V  FG ++V+ EGY+ +R VSWVHAWT+T+G
Subjt:  ANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDG

Query:  IITHVKEYLNTSVTVKRFASAADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL
        IIT V+EY NTS+TV R  S ++G  PS S  P    NCQS+WQSK+  +  VP LVLAL
Subjt:  IITHVKEYLNTSVTVKRFASAADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL

XP_038893485.1 senescence associated gene 20-like [Benincasa hispida]1.7e-4590.57Show/hide
Query:  MRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASA--ADGDSPSASLPPNCQSVWQSKVWGESVVP
        MRLLTGASSSFVFAPISVVPFG TVVLAEGY+TKRAVSWVHAWT+TDG+ITHVKEYLNTSVTVKRFASA   DGDSPS S PPNCQSVWQSKVWG+SVVP
Subjt:  MRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASA--ADGDSPSASLPPNCQSVWQSKVWGESVVP

Query:  ALVLAL
        ALVLAL
Subjt:  ALVLAL

TrEMBL top hitse value%identityAlignment
A0A061GYQ0 Senescence associated gene 20, putative2.4e-4560Show/hide
Query:  ANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDG
        A  E   E+  + R VRALY AL S+DVETVHRLLA DLEWWFHGPPSHQ+LMRLLTG++  F+F P+ V  FG ++V+ EGY+ +R VSWVHAWT+T+G
Subjt:  ANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDG

Query:  IITHVKEYLNTSVTVKRFASAADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL
        IIT V+EY NTS+TV R  S ++G  PS S  P    NCQS+WQSK+  +  VP LVLAL
Subjt:  IITHVKEYLNTSVTVKRFASAADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL

A0A1U7ZU64 uncharacterized protein LOC1045973501.5e-4460.61Show/hide
Query:  ITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASS--SFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHA
        + +LA S+ S E+  S+R VRALY ALG +DVET+ RLLAPD+EWWFHGPPSHQY+MRLLTG SS  SFVF P+S   FG T VL EG D  R+VSWVHA
Subjt:  ITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASS--SFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHA

Query:  WTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPPNCQSVWQS---KVWGESVVPALVLAL
        WT+ DGIIT V+EY +TS+TV RF  +  G SPS+S    C  +WQS   K  G+S VP LVLA+
Subjt:  WTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPPNCQSVWQS---KVWGESVVPALVLAL

A0A2N9EI45 Uncharacterized protein7.6e-4459.88Show/hide
Query:  KLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGAS--SSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAW
        +LANS+ S E++E + R V ALYKAL SKD + V RLLAPDLEWWFHGPP+HQ+LMRLLTG+S   SFVF P S+V FG T VL EGYD +R+VSWVHAW
Subjt:  KLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGAS--SSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAW

Query:  TITDGIITHVKEYLNTSVTVKRFASA----ADGDSPSASLPP-------NCQSVWQSKVWGESVVPALVLAL
        T+TDGIIT V+EY NTSV V RF  +      G S + S P         CQSVW+SK+   + VP LVLAL
Subjt:  TITDGIITHVKEYLNTSVTVKRFASA----ADGDSPSASLPP-------NCQSVWQSKVWGESVVPALVLAL

A0A5A7UY51 Putative Senescence associated protein 207.5e-7683.72Show/hide
Query:  SLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDT
        +LSF+  P + ITKLAN EWS EQRESV RVRALY+ALG+KDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPIS+VP GPT+VLAEG+  
Subjt:  SLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDT

Query:  KRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAA-DGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL
        KRAVSWVHAWTITDG+ITHVKEYLNTSVTVKRF+SAA DGDSPS S PPNC+S+WQSKVW ES +PALVLAL
Subjt:  KRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAA-DGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL

A0A6A1WK91 Wound-induced protein 14.9e-4361.54Show/hide
Query:  ITKLANSEWSSEQ--RESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASS---SFVFAPISVVPFGPTVVLAEGYDTKRAVSW
        + +L NS+ S E+    + R V ALYKAL SK  + V RLLAPDLEWWFHGPP HQ+LM LLTG+SS   SFVF P SVV FG T VL EGYD +R+VSW
Subjt:  ITKLANSEWSSEQ--RESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASS---SFVFAPISVVPFGPTVVLAEGYDTKRAVSW

Query:  VHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL
        VHAWT+TDGIIT V+EY NTSVTV RF S     S  AS P      CQSVWQS++  ES  P LVLAL
Subjt:  VHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL

SwissProt top hitse value%identityAlignment
P20144 Wound-induced protein 13.8e-1648.21Show/hide
Query:  MRLLTGA----SSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKV---W
        M++LTG     ++SF F   ++  FG +VVL EG D  R+++WVHAWT+TDG+IT V+EY NTS+TV RF     G S  +S+   +C SVW+S +    
Subjt:  MRLLTGA----SSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKV---W

Query:  GESVVPALVLAL
        G+S VP LVLAL
Subjt:  GESVVPALVLAL

Q94AK6 Senescence associated gene 206.7e-2150.45Show/hide
Query:  MRLLTG----ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKVWGES
        MR+LTG    +SSSF F P+SVV FG TV+ AEG D   ++SW+HAWT+ +GIIT V+EY NTS+TV R  +   G   +   PP +C SVW+S+  G +
Subjt:  MRLLTG----ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKVWGES

Query:  --VVPALVLAL
           VP LVLA+
Subjt:  --VVPALVLAL

Arabidopsis top hitse value%identityAlignment
AT3G10985.1 senescence associated gene 204.7e-2250.45Show/hide
Query:  MRLLTG----ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKVWGES
        MR+LTG    +SSSF F P+SVV FG TV+ AEG D   ++SW+HAWT+ +GIIT V+EY NTS+TV R  +   G   +   PP +C SVW+S+  G +
Subjt:  MRLLTG----ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKVWGES

Query:  --VVPALVLAL
           VP LVLA+
Subjt:  --VVPALVLAL

AT5G01740.1 Nuclear transport factor 2 (NTF2) family protein6.2e-2240.54Show/hide
Query:  VRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG---ASSSFVFAP--ISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLN
        +  LYKAL   D  TV +++A D+EWWFHGP   Q++MRLLTG      SF F P  + VV  G   V+AEG++  R V WVH W + DG++T ++EY N
Subjt:  VRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG---ASSSFVFAP--ISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLN

Query:  TSVTVKRFASAADGDSPSASLPPNCQSVWQS--KVWGESVVPALVLAL
        T +TV  ++  A G          C +VW+S  +      +P+L+LA+
Subjt:  TSVTVKRFASAADGDSPSASLPPNCQSVWQS--KVWGESVVPALVLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCCTTGTCCTTCCTACAGACTCCTGTGATCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAGAGGGAGAGCGTTCGGAGAGTGAGGGCCCTTTA
CAAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGCCTCCTCA
CCGGCGCCTCCTCCTCCTTCGTCTTCGCCCCAATCTCCGTCGTCCCATTTGGGCCCACTGTCGTGCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCGTGGGTCCAC
GCCTGGACCATTACTGATGGGATAATCACTCACGTGAAGGAATATCTCAACACCTCTGTTACCGTCAAGCGCTTCGCCTCCGCCGCGGACGGGGATTCGCCGTCCGCATC
GCTGCCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCCTTGTCCTTCCTACAGACTCCTGTGATCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAGAGGGAGAGCGTTCGGAGAGTGAGGGCCCTTTA
CAAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGCCTCCTCA
CCGGCGCCTCCTCCTCCTTCGTCTTCGCCCCAATCTCCGTCGTCCCATTTGGGCCCACTGTCGTGCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCGTGGGTCCAC
GCCTGGACCATTACTGATGGGATAATCACTCACGTGAAGGAATATCTCAACACCTCTGTTACCGTCAAGCGCTTCGCCTCCGCCGCGGACGGGGATTCGCCGTCCGCATC
GCTGCCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG
Protein sequenceShow/hide protein sequence
MQSLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVH
AWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL