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Lsi02G012300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationchr02:16128726..16130601
RNA-Seq ExpressionLsi02G012300
SyntenyLsi02G012300
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060006.1 EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo var. makuwa]1.0e-4079.82Show/hide
Query:  MVFISLSFCSSI--MSNGGSDNSKHCSFAKASQHYQNSIVNCEDQ-EFMSLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRC
        MVFI  SFCSSI   SNG SDN++ CSF +A Q+    I NCEDQ +FM LPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRC
Subjt:  MVFISLSFCSSI--MSNGGSDNSKHCSFAKASQHYQNSIVNCEDQ-EFMSLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRC

Query:  KCGNKLYIP
        KCGNKLY+P
Subjt:  KCGNKLYIP

KAF3964493.1 hypothetical protein CMV_011221 [Castanea mollissima]6.9e-2955.22Show/hide
Query:  KTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSI--MSNGGSDNSKHCSFA-KASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKCTP
        K N  P+ + + IFF               LSFC+ I  +S+  +     C  + KA  H+Q      E++E MSL RR LGGPGSSPPRCTSKCG CTP
Subjt:  KTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSI--MSNGGSDNSKHCSFA-KASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKCTP

Query:  CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        C  VHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

XP_011658830.1 EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus]5.5e-5074Show/hide
Query:  MEFDRNRVISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMS--NGGSDNSKHCSFAKASQHYQNSIVNCED----QEFMSLPRRGLGGP
        MEF+R+RV+ E NKTNPKPI+  I IF  FFFF  LFLMVFI  SFCSSIMS  NG SDN++ CSF K+ Q+  + I NCED     +FM LPRRGLGGP
Subjt:  MEFDRNRVISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMS--NGGSDNSKHCSFAKASQHYQNSIVNCED----QEFMSLPRRGLGGP

Query:  GSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        GSSPPRC SKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  GSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

XP_022948421.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita moschata]1.5e-2856.03Show/hide
Query:  FFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNC-------------------------EDQEFMSLPRRGLGGPGSSPPRCTS
        F F F  LFL   I +SF  S++S+ G DN + CS AKA       I +                          EDQE  +L RR LGGPGSSPPRCTS
Subjt:  FFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNC-------------------------EDQEFMSLPRRGLGGPGSSPPRCTS

Query:  KCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
         CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  KCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

XP_038895367.1 EPIDERMAL PATTERNING FACTOR-like protein 6 [Benincasa hispida]5.1e-4875Show/hide
Query:  MEFDRNRVISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPR
        MEF+RNRV+SE NKT  KPI     IFFFFFFFFL  ++ FI LSFCSSI+S+  SDN +  S AK  QHYQ SI N EDQE +SLPRRGLGG GSSPPR
Subjt:  MEFDRNRVISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPR

Query:  CTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        C SKCGKCTPCTAVHVPV PGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  CTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

TrEMBL top hitse value%identityAlignment
A0A0A0LXR9 Epidermal patterning factor-like protein2.6e-5074Show/hide
Query:  MEFDRNRVISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMS--NGGSDNSKHCSFAKASQHYQNSIVNCED----QEFMSLPRRGLGGP
        MEF+R+RV+ E NKTNPKPI+  I IF  FFFF  LFLMVFI  SFCSSIMS  NG SDN++ CSF K+ Q+  + I NCED     +FM LPRRGLGGP
Subjt:  MEFDRNRVISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMS--NGGSDNSKHCSFAKASQHYQNSIVNCED----QEFMSLPRRGLGGP

Query:  GSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        GSSPPRC SKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  GSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

A0A5D3BE35 Epidermal patterning factor-like protein5.0e-4179.82Show/hide
Query:  MVFISLSFCSSI--MSNGGSDNSKHCSFAKASQHYQNSIVNCEDQ-EFMSLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRC
        MVFI  SFCSSI   SNG SDN++ CSF +A Q+    I NCEDQ +FM LPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRC
Subjt:  MVFISLSFCSSI--MSNGGSDNSKHCSFAKASQHYQNSIVNCEDQ-EFMSLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRC

Query:  KCGNKLYIP
        KCGNKLY+P
Subjt:  KCGNKLYIP

A0A660KSE8 Epidermal patterning factor-like protein1.8e-2753.33Show/hide
Query:  KTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFC---SSIMSNGGSDNSKHCSF-AKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKCT
        ++  KP+I +    FF FFF           SFC   S+I S+  +     C   AKA  H+Q      E++ ++SL RR L GPGSSPPRC+ KCGKCT
Subjt:  KTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFC---SSIMSNGGSDNSKHCSF-AKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKCT

Query:  PCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        PC  VHVPVPPGTPVT+EYYPEAWRCKCGNKLY+P
Subjt:  PCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

A0A6J1G961 Epidermal patterning factor-like protein7.5e-2956.03Show/hide
Query:  FFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNC-------------------------EDQEFMSLPRRGLGGPGSSPPRCTS
        F F F  LFL   I +SF  S++S+ G DN + CS AKA       I +                          EDQE  +L RR LGGPGSSPPRCTS
Subjt:  FFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNC-------------------------EDQEFMSLPRRGLGGPGSSPPRCTS

Query:  KCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
         CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  KCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

A0A6J1KCE5 Epidermal patterning factor-like protein2.2e-2855.4Show/hide
Query:  FFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNC-------------------------EDQEFMSLPRRGLGGPGSSPPRCTSKC
        F F  LFL   I +SF  S++S+ G DN + CS AKA       I +                          EDQE  +L RR LGGPGSSPPRC S C
Subjt:  FFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNC-------------------------EDQEFMSLPRRGLGGPGSSPPRCTSKC

Query:  GKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        GKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  GKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 65.0e-2245.59Show/hide
Query:  ISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKC
        +     T  K  +F++ + FF       F +   S S   +  SN G+  + +      S           D+   +  RR L G GSSPPRC+SKCG+C
Subjt:  ISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKC

Query:  TPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        TPC  VHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  TPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 48.0e-2073.58Show/hide
Query:  GGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        GGPGSSPP C SKCGKC PC  VHVP+ PG  +  EYYPEAWRCKCGNKL++P
Subjt:  GGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

Q7M1E7 Polygalacturonase1.3e-0646.94Show/hide
Query:  SSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        SSPP C +KC  C PC    + V P  P   +YYP+ W C C NK+Y P
Subjt:  SSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

Q9FY19 Polygalacturonase1.3e-0646.94Show/hide
Query:  SSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        SSPP C +KC  C PC    + V P  P   +YYP+ W C C NK+Y P
Subjt:  SSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.8e-1968.42Show/hide
Query:  RRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        ++ LGGPGS PP C  KCGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL++P
Subjt:  RRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related3.4e-2685.96Show/hide
Query:  RRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        RR L G GSSPPRC+SKCG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  RRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

AT2G30370.2 allergen-related3.6e-2345.59Show/hide
Query:  ISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKC
        +     T  K  +F++ + FF       F +   S S   +  SN G+  + +      S           D+   +  RR L G GSSPPRC+SKCG+C
Subjt:  ISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKC

Query:  TPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        TPC  VHVPVPPGTPVTAEYYPEAWRCKCGNKLY+P
Subjt:  TPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

AT3G13898.1 unknown protein1.0e-0638.16Show/hide
Query:  ASQHYQNSIVN-CEDQEFMSLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVP----VPPGTPVTAEYYPEAWRCKC
        A ++ +  I+N  E++E +   RR +   GS PP C  KC  C PC A+  P    +P  +P  A Y PE WRC C
Subjt:  ASQHYQNSIVN-CEDQEFMSLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVP----VPPGTPVTAEYYPEAWRCKC

AT3G22820.1 allergen-related1.3e-2068.42Show/hide
Query:  RRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        ++ LGGPGS PP C  KCGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL++P
Subjt:  RRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)5.7e-2173.58Show/hide
Query:  GGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP
        GGPGSSPP C SKCGKC PC  VHVP+ PG  +  EYYPEAWRCKCGNKL++P
Subjt:  GGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGATAGAAACAGAGTAATCAGTGAGAAAAACAAAACCAACCCTAAACCCATCATCTTCTTCATCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTATT
TTTAATGGTTTTCATATCTTTATCATTCTGCAGCAGCATCATGAGTAATGGGGGTTCAGATAACTCTAAGCACTGCTCATTTGCTAAAGCTAGCCAGCACTATCAGAACT
CCATCGTTAATTGTGAAGATCAAGAGTTCATGAGCTTGCCGAGAAGAGGATTGGGTGGGCCAGGATCGTCGCCGCCGCGGTGCACCTCAAAGTGCGGGAAGTGCACGCCC
TGCACGGCGGTTCATGTGCCAGTGCCGCCGGGAACTCCGGTGACGGCCGAGTACTACCCGGAAGCCTGGAGATGCAAATGTGGGAATAAGCTTTACATTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATCATTGAAAGAAGAAACACCAAAAGCTCTGTAAAAAGAATCAATCTTTATCTTGTTAAATTATTTTCATTCTCTCTCTCTCTCTTTATCCTTAAAAACCATTCATTCTC
TCCACAATCAAAATTCCTCCTCTGCATTCACATTTCTCAAATCCCCACATCTTTGTATCACAAACATTATTAATTCCTAGAAGAACGAGAATAAAATAAATCCAAAGTTT
TCAATCATATCATCATTGTTTCACTTGTTCAAGTAAAAATTTCTTTTGATTTCTTCAAATTTTCTTCTGCTGTGAATGGAGTTTGATAGAAACAGAGTAATCAGTGAGAA
AAACAAAACCAACCCTAAACCCATCATCTTCTTCATCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTATTTTTAATGGTTTTCATATCTTTATCATTCTGCAGCA
GCATCATGAGTAATGGGGGTTCAGATAACTCTAAGCACTGCTCATTTGCTAAAGCTAGCCAGCACTATCAGAACTCCATCGTTAATTGTGAAGATCAAGAGTTCATGAGC
TTGCCGAGAAGAGGATTGGGTGGGCCAGGATCGTCGCCGCCGCGGTGCACCTCAAAGTGCGGGAAGTGCACGCCCTGCACGGCGGTTCATGTGCCAGTGCCGCCGGGAAC
TCCGGTGACGGCCGAGTACTACCCGGAAGCCTGGAGATGCAAATGTGGGAATAAGCTTTACATTCCCTGATCGGAAAAAGCATGCTACGGCCGGTCCTTGTCGTCCTTTA
CATATGCTATTTATCCGTCGATGAGCCAACCGGAAGAACTATGAATTTACCGCTGGCTGGTCTATGTAATTAAATTGGGTATGTGTTAATTACCGCTCACTATGTTCATC
TGACATCTCTATGTTGTATAAATTATATAGATTTATAGCGAATTATTTATAATATTGTCTGTTATTATATATATAAA
Protein sequenceShow/hide protein sequence
MEFDRNRVISEKNKTNPKPIIFFIFIFFFFFFFFLLFLMVFISLSFCSSIMSNGGSDNSKHCSFAKASQHYQNSIVNCEDQEFMSLPRRGLGGPGSSPPRCTSKCGKCTP
CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYIP