; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G012330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMitochondrial import inner membrane translocase subunit TIM22
Genome locationchr02:16195808..16196851
RNA-Seq ExpressionLsi02G012330
SyntenyLsi02G012330
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsIPR039175 - Mitochondrial import inner membrane translocase subunit TIM22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037014.1 Mitochondrial import inner membrane translocase subunit TIM22-1 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-6488.51Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MAS+SGD SS DP SS++   PP+EPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTA+QQFVYTAKQMGRRSWGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEK---ARAKHDMTNTVVAGCVTGGSISAKGWP
        AFAVMGF+FSAAECVVEK   ARAKHD+TNTVVAGCVTGGSISAKG P
Subjt:  AFAVMGFIFSAAECVVEK---ARAKHDMTNTVVAGCVTGGSISAKGWP

XP_008457318.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo]7.8e-6486.21Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MASTSGD  S DPP+SND+  PPI P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GLF+GLFLG++DN LMQDEMTA+QQFVYTAKQMGRR WGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        +FAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGG+ISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

XP_022154905.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Momordica charantia]4.1e-6588.97Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MA+ +G+ SS DP SSN++  PPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQ+EMTAKQQF++TAKQMGRRSWGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        AFAVMGFIFSAAECVVEKARAKHD TNTVVAGCVTGGSISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

XP_022948292.1 mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita moschata]3.7e-6690.34Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MAS+SGD SS DP SS++   PP+EPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTA+QQFVYTAKQMGRRSWGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        AFAVMGF+FSAAECVVEKARAKHD+TNTVVAGCVTGGSISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

XP_038893922.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Benincasa hispida]4.6e-7297.24Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MASTSGDRSSLDPP+SNDS NPPIEPIRMPT+EEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

TrEMBL top hitse value%identityAlignment
A0A1S3C5B1 mitochondrial import inner membrane translocase subunit TIM22-4-like3.8e-6486.21Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MASTSGD  S DPP+SND+  PPI P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GLF+GLFLG++DN LMQDEMTA+QQFVYTAKQMGRR WGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        +FAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGG+ISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

A0A5A7V2G8 Mitochondrial import inner membrane translocase subunit TIM22-4-like7.1e-6386.62Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MASTSGD  S DPP+SND+  PPI P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GLF+GLFLG++DN LMQDEMTA+QQFVYTAKQMGRR WGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAK
        +FAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGG+ISAK
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAK

A0A6J1DKY7 mitochondrial import inner membrane translocase subunit TIM22-4-like2.0e-6588.97Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MA+ +G+ SS DP SSN++  PPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQ+EMTAKQQF++TAKQMGRRSWGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        AFAVMGFIFSAAECVVEKARAKHD TNTVVAGCVTGGSISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

A0A6J1G8S5 mitochondrial import inner membrane translocase subunit TIM22-41.8e-6690.34Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MAS+SGD SS DP SS++   PP+EPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTA+QQFVYTAKQMGRRSWGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        AFAVMGF+FSAAECVVEKARAKHD+TNTVVAGCVTGGSISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

A0A6J1K8G7 mitochondrial import inner membrane translocase subunit TIM22-41.8e-6690.34Show/hide
Query:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK
        MAS+SGD SS DP SS++   PP+EPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTA+QQFVYTAKQMGRRSWGSAK
Subjt:  MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAK

Query:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        AFAVMGF+FSAAECVVEKARAKHD+TNTVVAGCVTGGSISAKG P
Subjt:  AFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

SwissProt top hitse value%identityAlignment
A0A1D8PI78 Mitochondrial import inner membrane translocase subunit TIM221.3e-1636.96Show/hide
Query:  PPIEPIRMPTVEEIRGQ------DIWNNCAVRSVVSGVMGGGLGLFMGLFLG--ALDNPLMQD------EMTAKQQFVYTAKQMGRRSWGSAKAFAVMGF
        PP +P++  T EE   +         N+C  ++V++GV G  LG F GLF+   A D P+  D      E+  KQQ       M +RS+ SAK F  +G 
Subjt:  PPIEPIRMPTVEEIRGQ------DIWNNCAVRSVVSGVMGGGLGLFMGLFLG--ALDNPLMQD------EMTAKQQFVYTAKQMGRRSWGSAKAFAVMGF

Query:  IFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        ++S  EC +E  RAKHD+ N V AGC+TG  ++ +  P
Subjt:  IFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

A1XJK0 Mitochondrial import inner membrane translocase subunit TIM22-42.5e-4976.92Show/hide
Query:  MPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNT
        MPT+EEIR Q++WNNCAVR+V SGVMGGGLGL MGLFLGALDNP+  D MTA+QQFV+TAKQMG+RSW S K FAVMG +FSAAEC+VEKARAKHD  NT
Subjt:  MPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNT

Query:  VVAGCVTGGSISAKGWP
         +AGCVTGGS+SA+G P
Subjt:  VVAGCVTGGSISAKGWP

A2RVP7 Mitochondrial import inner membrane translocase subunit TIM22-12.2e-5372.93Show/hide
Query:  PPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAA
        PP ++D  +  I+PIRMPT+EEIR Q++WNNCAVR+V SGVMGGGLGL MGLFLGALDNP+  D MTA+QQFV+TAKQMG+RSW S K FAVMG +FSAA
Subjt:  PPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAA

Query:  ECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        EC+VEKARAKHD  NT +AGCVTGGS+SA+G P
Subjt:  ECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP

Q2UAP8 Mitochondrial import inner membrane translocase subunit tim225.7e-1740.91Show/hide
Query:  NCAVRSVVSGVMGGGLGLFMGLFLGAL--DNPLMQD-----EMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVT
        +C V++V+SG MG GLG   GLF+ ++  D+          ++  ++Q     K MG RSW SAK F ++G ++S  EC VE  RAK+D++N+V++GC+T
Subjt:  NCAVRSVVSGVMGGGLGLFMGLFLGAL--DNPLMQD-----EMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVT

Query:  GGSISAKGWP
        GG + AK  P
Subjt:  GGSISAKGWP

Q6BZY4 Mitochondrial import inner membrane translocase subunit TIM226.3e-1641.82Show/hide
Query:  NCAVRSVVSGVMGGGLGLFMGLFLG--ALDNPL-----MQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVT
        +C  +SV++GV G GLG   GLF+   A D P+        ++  KQQ       MG+R+W SAK F  +G +FS  EC +E  RAK+D+ N V AGC+T
Subjt:  NCAVRSVVSGVMGGGLGLFMGLFLG--ALDNPL-----MQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVT

Query:  GGSISAKGWP
        GG ++ K  P
Subjt:  GGSISAKGWP

Arabidopsis top hitse value%identityAlignment
AT1G18320.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.8e-5076.92Show/hide
Query:  MPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNT
        MPT+EEIR Q++WNNCAVR+V SGVMGGGLGL MGLFLGALDNP+  D MTA+QQFV+TAKQMG+RSW S K FAVMG +FSAAEC+VEKARAKHD  NT
Subjt:  MPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNT

Query:  VVAGCVTGGSISAKGWP
         +AGCVTGGS+SA+G P
Subjt:  VVAGCVTGGSISAKGWP

AT3G10110.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.6e-5472.93Show/hide
Query:  PPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAA
        PP ++D  +  I+PIRMPT+EEIR Q++WNNCAVR+V SGVMGGGLGL MGLFLGALDNP+  D MTA+QQFV+TAKQMG+RSW S K FAVMG +FSAA
Subjt:  PPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAA

Query:  ECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP
        EC+VEKARAKHD  NT +AGCVTGGS+SA+G P
Subjt:  ECVVEKARAKHDMTNTVVAGCVTGGSISAKGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACTTCTGGAGATAGATCTTCGCTCGATCCACCCAGCTCCAACGACTCGGGGAACCCTCCAATTGAGCCTATAAGGATGCCTACAGTCGAAGAGATTCGCGG
CCAAGATATTTGGAACAACTGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATGGGTGGTGGGCTTGGATTGTTCATGGGATTATTTTTGGGGGCATTGGATAATCCATTGA
TGCAAGACGAGATGACTGCTAAACAGCAATTTGTTTATACTGCAAAACAGATGGGACGACGTAGTTGGGGTTCTGCAAAAGCGTTTGCAGTCATGGGCTTTATTTTCTCA
GCAGCAGAATGTGTTGTAGAAAAGGCTCGAGCCAAACATGATATGACGAATACAGTAGTTGCTGGTTGTGTAACCGGTGGTTCAATATCAGCTAAAGGTTGGCCTTCTTA
CCCTTCTATGTACTTGCGTTACTTTCCAGTCAAGTGTTGCATACATGTGAATTTTCAGCTAGCCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACTTCTGGAGATAGATCTTCGCTCGATCCACCCAGCTCCAACGACTCGGGGAACCCTCCAATTGAGCCTATAAGGATGCCTACAGTCGAAGAGATTCGCGG
CCAAGATATTTGGAACAACTGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATGGGTGGTGGGCTTGGATTGTTCATGGGATTATTTTTGGGGGCATTGGATAATCCATTGA
TGCAAGACGAGATGACTGCTAAACAGCAATTTGTTTATACTGCAAAACAGATGGGACGACGTAGTTGGGGTTCTGCAAAAGCGTTTGCAGTCATGGGCTTTATTTTCTCA
GCAGCAGAATGTGTTGTAGAAAAGGCTCGAGCCAAACATGATATGACGAATACAGTAGTTGCTGGTTGTGTAACCGGTGGTTCAATATCAGCTAAAGGTTGGCCTTCTTA
CCCTTCTATGTACTTGCGTTACTTTCCAGTCAAGTGTTGCATACATGTGAATTTTCAGCTAGCCATGTAA
Protein sequenceShow/hide protein sequence
MASTSGDRSSLDPPSSNDSGNPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFS
AAECVVEKARAKHDMTNTVVAGCVTGGSISAKGWPSYPSMYLRYFPVKCCIHVNFQLAM