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Lsi02G012440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:16332228..16333520
RNA-Seq ExpressionLsi02G012440
SyntenyLsi02G012440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153363.1 uncharacterized protein LOC101214045 [Cucumis sativus]2.3e-7690.53Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNATLNSGIVF+E+IADGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSDPHFH L NGC VENAVSSL+LNDDVERRCSD+EEEERMR ASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPEN TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTP+VSN++GN
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
XP_008457323.1 PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo]3.1e-7691.12Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNATLNSGIVFSE+I DGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSD HFH L NGC VENAVSSL+LNDDVERRCSD+EEEERMREASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPEN TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+VSN+I N
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
XP_022964640.1 uncharacterized protein LOC111464656 [Cucurbita moschata]5.6e-7891.72Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNA+LNSG+VFSE+IADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DE YSSD H HHL NGCRVENAVSSLSLNDDVERRCSDEEEEE MREASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+  NN GN
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
XP_022970483.1 uncharacterized protein LOC111469451 [Cucurbita maxima]1.1e-7892.31Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNA+LNSG+VFSE+IADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DETYSSD H HHL NGCRVENAVSSLSLNDDVERRCSDEEEEE MREASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+  NN GN
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
XP_038894769.1 uncharacterized protein LOC120083197 [Benincasa hispida]5.7e-8397.04Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSE+ETYSSDPHFHHLSNGC VENAVSSLSLNDDVERRCSD+EEEERMREASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNN GN
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
TrEMBL top hitse value%identityAlignment
A0A0A0LXQ6 Uncharacterized protein1.1e-7690.53Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNATLNSGIVF+E+IADGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSDPHFH L NGC VENAVSSL+LNDDVERRCSD+EEEERMR ASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPEN TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTP+VSN++GN
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
A0A1S3C5C0 uncharacterized protein LOC1034970441.5e-7691.12Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNATLNSGIVFSE+I DGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSD HFH L NGC VENAVSSL+LNDDVERRCSD+EEEERMREASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPEN TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+VSN+I N
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
A0A5A7UY79 Uncharacterized protein1.8e-6990.38Show/hide
Query:  EIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDSAIRMAFREDESRR
        +I DGSDSDTNSAEGSDYYEPISAIDGEESD A SEDETYSSD HFH L NGC VENAVSSL+LNDDVERRCSD+EEEERMREASDSAIRMAFREDE+RR
Subjt:  EIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDSAIRMAFREDESRR

Query:  NAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        NAPLSPEN TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+VSN+I N
Subjt:  NAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
A0A6J1HLE1 uncharacterized protein LOC1114646562.7e-7891.72Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNA+LNSG+VFSE+IADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DE YSSD H HHL NGCRVENAVSSLSLNDDVERRCSDEEEEE MREASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+  NN GN
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
A0A6J1I3Z1 uncharacterized protein LOC1114694515.4e-7992.31Show/hide
Query:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS
        MNA+LNSG+VFSE+IADGSDSDTNSAEGSDYYEPISAIDGEESDEAGS+DETYSSD H HHL NGCRVENAVSSLSLNDDVERRCSDEEEEE MREASDS
Subjt:  MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDS

Query:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
        AIRMAFREDE+RRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+  NN GN
Subjt:  AIRMAFREDESRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07020.1 unknown protein3.4e-2552.7Show/hide
Query:  GSDSDTNSAEGS-DYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNG-CRVENA---VSSLSLNDDVERRCSDEEEEERMREASDSAIRMAFREDESR
        GSDSD+NS E S DYYEPISA+D   S++   E+++Y        LSNG C + +A   +SS+S+ND+     +D EEE       +  IR AF EDE R
Subjt:  GSDSDTNSAEGS-DYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNG-CRVENA---VSSLSLNDDVERRCSDEEEEERMREASDSAIRMAFREDESR

Query:  RNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQT
        R +PL  ENA R+MEAMR ISF G+APDW   V+EDRWIDQLRRLR T
Subjt:  RNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCAACGTTGAATTCTGGAATTGTTTTCTCTGAAGAGATAGCCGACGGAAGTGATTCGGATACGAATTCTGCTGAAGGATCGGATTACTATGAGCCGATCTCGGC
CATTGATGGTGAAGAATCCGATGAAGCTGGATCAGAGGACGAAACCTACAGCTCCGATCCTCATTTCCACCATTTATCTAACGGATGCCGTGTAGAGAATGCAGTTTCGT
CTCTTAGCCTGAACGACGATGTAGAGAGAAGGTGCAGTGATGAAGAAGAGGAGGAGAGGATGAGAGAAGCTTCTGATTCGGCGATAAGAATGGCGTTTAGAGAGGATGAG
AGTCGGCGGAATGCTCCTCTGTCGCCGGAGAATGCAACGAGGATCATGGAGGCCATGCGCGGCATATCGTTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTTTCCGA
GGATCGTTGGATTGATCAGCTTCGAAGGCTTAGGCAAACGCCAAGCGTTTCCAATAATATCGGGAACTGA
mRNA sequenceShow/hide mRNA sequence
TTTAGATCCTTATGATCGGAACTGCCCTAATTAGCCATCGTGGGTGCTCGTTTCGATTGGAGAATGAACGCAACGTTGAATTCTGGAATTGTTTTCTCTGAAGAGATAGC
CGACGGAAGTGATTCGGATACGAATTCTGCTGAAGGATCGGATTACTATGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGAGGACGAAACCT
ACAGCTCCGATCCTCATTTCCACCATTTATCTAACGGATGCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTAGAGAGAAGGTGCAGTGATGAAGAA
GAGGAGGAGAGGATGAGAGAAGCTTCTGATTCGGCGATAAGAATGGCGTTTAGAGAGGATGAGAGTCGGCGGAATGCTCCTCTGTCGCCGGAGAATGCAACGAGGATCAT
GGAGGCCATGCGCGGCATATCGTTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTTTCCGAGGATCGTTGGATTGATCAGCTTCGAAGGCTTAGGCAAACGCCAAGCG
TTTCCAATAATATCGGGAACTGAGAGATGGAACTCTTATCATTTCGAAATTCAGATCCCAGTCTTCTTCTTCATCTTCTTCATTCCTTTGGTTTGTTAAAGAATTATCAT
GTGGCTCTCCGTTTATCTTCATGAATAAAAAATCCTTCTGGGTTTTGGTTCGCGAACAGATCCTCCATTTCCCAATCACATGCGATTTCTTCGATATCATAATTGAATAT
CATTCAACTTATGCTTAGAATGAGTTTTCTAATTCAAACTTCTGGTTTCCGGCTGTGTTATTCTTGAAAGAATTCCCAAGCCATGACCTTGAATGAGCTGCTTGCTTCAA
GCTAAGCTAAGCTTCTTCAAGCCACAATCTACTCATTTCTGCACTTTTGTGTATCCTCTTGTCAAACCCAGCTTGAACCTGATGAAATGGTTCCCAAAATAAGCTCAAAA
TAGCCATTACCAACCTATTTGAATTGGTTATCTTAGATTCCAACTCTTTCCCCTCCCCCCTATTGATGAAGTTGAAGCATATGACTAATAAAGATTTAAATCGTCACTCT
TTGTTTTAAGTTCTAATTTCTATAAGAAATTTTAAAGGGTGTTTGGGACCCAATTTTAAGTGTACGGAATCAACGTTTGGGGCTCTATTTATAATAGTTAGTATTTTC
Protein sequenceShow/hide protein sequence
MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSEDETYSSDPHFHHLSNGCRVENAVSSLSLNDDVERRCSDEEEEERMREASDSAIRMAFREDE
SRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNIGN