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Lsi02G012730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein PSY1-like
Genome locationchr02:16927064..16928478
RNA-Seq ExpressionLsi02G012730
SyntenyLsi02G012730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607316.1 hypothetical protein SDJN03_00658, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1368.66Show/hide
Query:  SRLSLYFSFLFLLLVATAMVA-SVARYAPANPIESKERNEGMIGLQDYGDARANHRHDPHHPLTVKG
        SR SLYFS LF LL   A+VA S AR  PA+PI S ER++ MIGL+DYGDARANHRH+PHHPL V+G
Subjt:  SRLSLYFSFLFLLLVATAMVA-SVARYAPANPIESKERNEGMIGLQDYGDARANHRHDPHHPLTVKG

KGN65819.1 hypothetical protein Csa_023229 [Cucumis sativus]4.9e-1877.27Show/hide
Query:  PSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERNE-GMIGLQDYGDARANHRHDPHHPLTV
        P RLS YFSFL LLL+ATAMVAS AR+APA P+ S +RN+  MIGLQDYGDARANHRHDPHHPL+V
Subjt:  PSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERNE-GMIGLQDYGDARANHRHDPHHPLTV

XP_008457363.1 PREDICTED: protein PSY1-like [Cucumis melo]5.8e-1979.41Show/hide
Query:  ASPSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERN-EGMIGLQDYGDARANHRHDPHHPLTV
        +S  RLS YFSFL LLL+ TAMVAS AR+AP  PI S ERN EGMIGLQDYGDARANHRHDPHHPLTV
Subjt:  ASPSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERN-EGMIGLQDYGDARANHRHDPHHPLTV

XP_022150920.1 uncharacterized protein LOC111018956 [Momordica charantia]2.4e-0946.81Show/hide
Query:  SRLSLYFSFLFLLLVATAMVASVARYAPANP---------IESKER-------------------NEGMIGLQDYGDARANHRHDPHHPLTVKG
        SRLSLYFS L LLL   ++V+S AR+APA           +E  ER                   +E MIGL DYGD  ANH+HDPHHPL VKG
Subjt:  SRLSLYFSFLFLLLVATAMVASVARYAPANP---------IESKER-------------------NEGMIGLQDYGDARANHRHDPHHPLTVKG

XP_022998316.1 uncharacterized protein LOC111492989 [Cucurbita maxima]1.2e-1367.16Show/hide
Query:  SRLSLYFSFLFLLLVATAMVASV-ARYAPANPIESKERNEGMIGLQDYGDARANHRHDPHHPLTVKG
        S+ SLYFS LF LL   A+VA+  AR  PANPI S ER++ MIGL+DYGDARANHRH+PHHPL V+G
Subjt:  SRLSLYFSFLFLLLVATAMVASV-ARYAPANPIESKERNEGMIGLQDYGDARANHRHDPHHPLTVKG

TrEMBL top hitse value%identityAlignment
A0A0A0LXN0 Uncharacterized protein2.4e-1877.27Show/hide
Query:  PSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERNE-GMIGLQDYGDARANHRHDPHHPLTV
        P RLS YFSFL LLL+ATAMVAS AR+APA P+ S +RN+  MIGLQDYGDARANHRHDPHHPL+V
Subjt:  PSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERNE-GMIGLQDYGDARANHRHDPHHPLTV

A0A1S3C5B4 protein PSY1-like2.8e-1979.41Show/hide
Query:  ASPSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERN-EGMIGLQDYGDARANHRHDPHHPLTV
        +S  RLS YFSFL LLL+ TAMVAS AR+AP  PI S ERN EGMIGLQDYGDARANHRHDPHHPLTV
Subjt:  ASPSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERN-EGMIGLQDYGDARANHRHDPHHPLTV

A0A6J1D9T4 uncharacterized protein LOC1110189561.2e-0946.81Show/hide
Query:  SRLSLYFSFLFLLLVATAMVASVARYAPANP---------IESKER-------------------NEGMIGLQDYGDARANHRHDPHHPLTVKG
        SRLSLYFS L LLL   ++V+S AR+APA           +E  ER                   +E MIGL DYGD  ANH+HDPHHPL VKG
Subjt:  SRLSLYFSFLFLLLVATAMVASVARYAPANP---------IESKER-------------------NEGMIGLQDYGDARANHRHDPHHPLTVKG

A0A6J1K9X5 uncharacterized protein LOC1114929896.0e-1467.16Show/hide
Query:  SRLSLYFSFLFLLLVATAMVASV-ARYAPANPIESKERNEGMIGLQDYGDARANHRHDPHHPLTVKG
        S+ SLYFS LF LL   A+VA+  AR  PANPI S ER++ MIGL+DYGDARANHRH+PHHPL V+G
Subjt:  SRLSLYFSFLFLLLVATAMVASV-ARYAPANPIESKERNEGMIGLQDYGDARANHRHDPHHPLTVKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCCTTCTCGACTTTCCCTTTACTTTTCTTTCCTCTTTCTCCTTCTTGTTGCTACCGCCATGGTAGCTTCTGTCGCTCGCTATGCACCCGCAAATCCAATTGA
AAGCAAGGAGAGAAATGAAGGGATGATTGGCTTACAAGACTATGGTGATGCACGTGCCAATCATAGACATGATCCTCACCATCCTCTAACTGTCAAGGGTAAGCCTAACC
ATACATGA
mRNA sequenceShow/hide mRNA sequence
TTGAAATTAGAAGGTGAAGAGAGGTAGAGATGGCTTCTCCTTCTCGACTTTCCCTTTACTTTTCTTTCCTCTTTCTCCTTCTTGTTGCTACCGCCATGGTAGCTTCTGTC
GCTCGCTATGCACCCGCAAATCCAATTGAAAGCAAGGAGAGAAATGAAGGGATGATTGGCTTACAAGACTATGGTGATGCACGTGCCAATCATAGACATGATCCTCACCA
TCCTCTAACTGTCAAGGGTAAGCCTAACCATACATGA
Protein sequenceShow/hide protein sequence
MASPSRLSLYFSFLFLLLVATAMVASVARYAPANPIESKERNEGMIGLQDYGDARANHRHDPHHPLTVKGKPNHT