; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G012760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionextensin-like isoform X2
Genome locationchr02:16944124..16950278
RNA-Seq ExpressionLsi02G012760
SyntenyLsi02G012760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031836.1 Protein PSY3 [Cucumis melo var. makuwa]3.1e-1067.27Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY KARL LFLLLSF L+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

KAA0031837.1 hypothetical protein E6C27_scaffold848G00870 [Cucumis melo var. makuwa]3.1e-1065.45Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY K RL L LLLSFA++T AR+ PHSE Q+   TI DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

KAA0031838.1 hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa]1.2e-0967.86Show/hide
Query:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        M+YFKARL  LFLLLSFAL+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]1.1e-1067.86Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM
        MDY KARL LFLLLSFAL T AR+ PHSE Q+ T  + DY DPG NPRHDP  PP+
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM

XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]8.2e-4352.07Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPMMINDYVDPGANPRHDPNQPP-MINDYADPGANPRHDPNQPPPPP
        M+YFKARLT FLLLSFALITLAR+TPHSE Q+ TITI DY DPG NPRHDPNQPPMMINDY DPGANPRHDPNQ P MINDY DPGANPRHDPNQPP   
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPMMINDYVDPGANPRHDPNQPP-MINDYADPGANPRHDPNQPPPPP

Query:  PRRFELKMMKLKMKTTGLSQMKGSSAVCDPLIDGFELQQRNNNKDCFKARLTLFLLLSFALVASARIMLHSDKQDMTIAISDYVDPGPNPRHDSNQPPPP
         R                          +P  D  +     N+                      R     D     + I+DY D G NPRHDSNQ PPP
Subjt:  PRRFELKMMKLKMKTTGLSQMKGSSAVCDPLIDGFELQQRNNNKDCFKARLTLFLLLSFALVASARIMLHSDKQDMTIAISDYVDPGPNPRHDSNQPPPP

Query:  PSSRFKVNVVDGPDSTN
           RFKV+   G  S N
Subjt:  PSSRFKVNVVDGPDSTN

TrEMBL top hitse value%identityAlignment
A0A0A0M0T8 Uncharacterized protein5.2e-1167.86Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM
        MDY KARL LFLLLSFAL T AR+ PHSE Q+ T  + DY DPG NPRHDP  PP+
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM

A0A5A7SMH7 Uncharacterized protein5.8e-1067.86Show/hide
Query:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        M+YFKARL  LFLLLSFAL+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

A0A5A7SPC6 Protein PSY31.5e-1067.27Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY KARL LFLLLSF L+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

A0A5D3BBU7 Uncharacterized protein1.5e-1065.45Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY K RL L LLLSFA++T AR+ PHSE Q+   TI DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

A0A6J1G9M0 extensin-like isoform X27.5e-1033.76Show/hide
Query:  FKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQP-----------PMMINDYVDPGAN-------PRHDPNQPP-----MIND
        FK  L L  LLSFAL++ AR+   S KQ T I I DY DPG NP   P  P           P  INDY DPG N       P+  P  PP     +IND
Subjt:  FKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQP-----------PMMINDYVDPGAN-------PRHDPNQPP-----MIND

Query:  YADPGANPRHDPNQP---PPPPPRRFELKMMKLKMKTTGLSQMKGSSAVCDPLIDGFELQQRNNNKDCFKARLTLFLLLSFALVASARIMLHSDKQDMTI
        Y+DPG NP   P  P   PPPPP          K          G +    P++     +Q       FKA                             
Subjt:  YADPGANPRHDPNQP---PPPPPRRFELKMMKLKMKTTGLSQMKGSSAVCDPLIDGFELQQRNNNKDCFKARLTLFLLLSFALVASARIMLHSDKQDMTI

Query:  AISDYVDPGPNPRHDSNQPP--PPPSSRFKVNVV
         I+DY DPG NP      P   PPP   FK  VV
Subjt:  AISDYVDPGPNPRHDSNQPP--PPPSSRFKVNVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCTTTCACTTCACATTCCCATTACCAATTTTCAAACAAAAGCAAGGGAACAATAACATGGATTATTTCAAAGCTCGTCTTACTCTCTTCCTCTTGCTCTCGTT
TGCTCTCATTACTTTAGCTCGGCTCACACCCCATTCAGAAAAACAAGACACGACGATTACGATAAAGGACTATGTTGATCCAGGAGATAATCCAAGACATGATCCAAACC
AGCCGCCAATGATGATAAATGACTATGTTGATCCAGGAGCTAATCCAAGACATGATCCAAATCAGCCGCCAATGATAAATGACTATGCTGATCCGGGAGCTAATCCAAGA
CATGATCCAAATCAACCACCCCCACCTCCACCACGACGGTTTGAGTTAAAGATGATGAAATTGAAGATGAAAACAACAGGGTTGTCACAGATGAAGGGTAGTTCCGCCGT
CTGTGACCCACTGATAGATGGATTTGAATTACAGCAAAGGAACAATAACAAGGATTGTTTCAAAGCTCGCCTCACTCTCTTCCTCTTGCTCTCGTTTGCCCTTGTTGCCT
CAGCTCGGATCATGCTCCATTCAGATAAGCAAGACATGACGATTGCGATAAGTGACTATGTTGATCCGGGACCTAATCCAAGACATGATTCAAACCAGCCGCCGCCGCCA
CCGTCATCACGGTTCAAAGTTAACGTTGTCGATGGCCCCGACAGCACAAATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCTTTCACTTCACATTCCCATTACCAATTTTCAAACAAAAGCAAGGGAACAATAACATGGATTATTTCAAAGCTCGTCTTACTCTCTTCCTCTTGCTCTCGTT
TGCTCTCATTACTTTAGCTCGGCTCACACCCCATTCAGAAAAACAAGACACGACGATTACGATAAAGGACTATGTTGATCCAGGAGATAATCCAAGACATGATCCAAACC
AGCCGCCAATGATGATAAATGACTATGTTGATCCAGGAGCTAATCCAAGACATGATCCAAATCAGCCGCCAATGATAAATGACTATGCTGATCCGGGAGCTAATCCAAGA
CATGATCCAAATCAACCACCCCCACCTCCACCACGACGGTTTGAGTTAAAGATGATGAAATTGAAGATGAAAACAACAGGGTTGTCACAGATGAAGGGTAGTTCCGCCGT
CTGTGACCCACTGATAGATGGATTTGAATTACAGCAAAGGAACAATAACAAGGATTGTTTCAAAGCTCGCCTCACTCTCTTCCTCTTGCTCTCGTTTGCCCTTGTTGCCT
CAGCTCGGATCATGCTCCATTCAGATAAGCAAGACATGACGATTGCGATAAGTGACTATGTTGATCCGGGACCTAATCCAAGACATGATTCAAACCAGCCGCCGCCGCCA
CCGTCATCACGGTTCAAAGTTAACGTTGTCGATGGCCCCGACAGCACAAATCCCTAAGGGAATCTGCTTGTCAGAGGAGGAGGACCTATTGGCAAACAACATCAGCAAGG
GAAGCTTAAACAAAGAATTAATGATGTGCATGAACCAATAATAGTACTATAAATATTATATTATTGATGTCAATAATTCCATTTATGTGTTGAGAATGGAATAGTATATG
CTATTAAATTGATGATGTAATGAATGCTGAAAATAGTATGGTAATGAACAAATTAAAAATATCATTGGAATTTTTGCTC
Protein sequenceShow/hide protein sequence
MDFFHFTFPLPIFKQKQGNNNMDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPMMINDYVDPGANPRHDPNQPPMINDYADPGANPR
HDPNQPPPPPPRRFELKMMKLKMKTTGLSQMKGSSAVCDPLIDGFELQQRNNNKDCFKARLTLFLLLSFALVASARIMLHSDKQDMTIAISDYVDPGPNPRHDSNQPPPP
PSSRFKVNVVDGPDSTNP