; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G012850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionnudC domain-containing protein 2-like
Genome locationchr02:17183037..17186302
RNA-Seq ExpressionLsi02G012850
SyntenyLsi02G012850
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR007052 - CS domain
IPR008978 - HSP20-like chaperone
IPR037898 - NudC family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019138.1 NudC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-7797.2Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSS
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQS HVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPY++
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSS

Query:  DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG
        DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIRLG
Subjt:  DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG

XP_004151457.1 nudC domain-containing protein 2 [Cucumis sativus]2.0e-7387.82Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVE+GIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
        ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR

XP_008457374.1 PREDICTED: nudC domain-containing protein 2 [Cucumis melo]3.2e-7489.1Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
        ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR

XP_022964859.1 nudC domain-containing protein 2-like [Cucurbita moschata]2.4e-7487.34Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQS HVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIRLG
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG

XP_038894388.1 nudC domain-containing protein 2 [Benincasa hispida]4.9e-7587.97Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLE+VNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPP+LN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG
        ASPIQGQGQLDPYS+DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG

TrEMBL top hitse value%identityAlignment
A0A0A0LV57 CS domain-containing protein9.9e-7487.82Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVE+GIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
        ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR

A0A1S3C618 nudC domain-containing protein 21.5e-7489.1Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
        ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR

A0A5A7SMF6 NudC domain-containing protein 21.5e-7489.1Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
        ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR

A0A6J1HPE6 nudC domain-containing protein 2-like1.2e-7487.34Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQS HVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIRLG
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG

A0A6J1I2V0 nudC domain-containing protein 2-like1.2e-7487.34Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQS HVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIRLG
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG

SwissProt top hitse value%identityAlignment
Q5M823 NudC domain-containing protein 22.4e-1637.6Show/hide
Query:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSSDLEQ
        +W QTLEEV I + +PP   ++   C +QSRHV + + G              +     +ED  M    +T  KRD    W S ++ +   DP+  D  Q
Subjt:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSSDLEQ

Query:  KRLMLQRFQEENPGFDFSQAQFSGN
        ++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  KRLMLQRFQEENPGFDFSQAQFSGN

Q8WVJ2 NudC domain-containing protein 21.4e-1635.97Show/hide
Query:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ
        E+R   +  G    +W QTLEEV I + +PP   ++   C +QSRHV + + G              +     +ED  M    +T  KRD    W S ++
Subjt:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ

Query:  GQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGN
         +   DP+  D  Q++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  GQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGN

Q9CQ48 NudC domain-containing protein 21.4e-1635.97Show/hide
Query:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ
        E+R   +  G    +W QTLEEV I + +PP   ++   C +QSRHV + + G              +     +ED  M    +T  KRD    W S ++
Subjt:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ

Query:  GQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGN
         +   DP+  D  Q++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  GQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGN

Q9STN7 Protein BOBBER 22.4e-0825.95Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------
        + W Q L+EV I I +P    S+   C+I+   ++VG+KG               +  + N+ED  ++ + L K+D+ + W   ++G+            
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------

Query:  ---GQLDPYS--------------------SDLEQKRLMLQRFQEENPGFDFSQAQFS
           G LDP +                    SD  +K+ ML++F  +NPG DFS A+F+
Subjt:  ---GQLDPYS--------------------SDLEQKRLMLQRFQEENPGFDFSQAQFS

Arabidopsis top hitse value%identityAlignment
AT4G27890.1 HSP20-like chaperones superfamily protein1.7e-0925.95Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------
        + W Q L+EV I I +P    S+   C+I+   ++VG+KG               +  + N+ED  ++ + L K+D+ + W   ++G+            
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------

Query:  ---GQLDPYS--------------------SDLEQKRLMLQRFQEENPGFDFSQAQFS
           G LDP +                    SD  +K+ ML++F  +NPG DFS A+F+
Subjt:  ---GQLDPYS--------------------SDLEQKRLMLQRFQEENPGFDFSQAQFS

AT5G58740.1 HSP20-like chaperones superfamily protein1.1e-7280.77Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRH F+HNGQKVFEWDQTLEEVN+YI LPPNVH K F+CKIQS+H+EVGIKGNPPYLN               +EDDIMHITLQKR+KGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
        ASPI GQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Subjt:  ASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTCCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACACTGGAGGAGGTTAACATTTATATTAATTTGCC
TCCAAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCGAGGATGACATAATGCACA
TTACACTGCAGAAGAGGGATAAGGGTCAGACATGGGCTTCTCCAATACAGGGTCAGGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAAAAGCGTCTTATGCTCCAG
AGGTTTCAAGAGGAGAACCCTGGATTTGACTTCTCACAAGCTCAGTTTTCAGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTTAGGTTGA
mRNA sequenceShow/hide mRNA sequence
AACTATTAATTTTTTTCTACAACAACTTATTTATTTTCCAAACACACCCTAGAAATTTTAGGACCGGTTGAAGAACAAAATCTAGCTCTCCAGAAGCTTCGCTAGACCGG
AACTTCTCGTTAGGAAAAGGAAAAGCTTTGTGTGAAATTCGCGGGAAAGGGGAGAAGCAAACCCTAAAGGGATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTC
CTCCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACACTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTCATTCCAAGCAATTCTACTGCAAGATTCA
GTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCGAGGATGACATAATGCACATTACACTGCAGAAGAGGGATAAGGGTCAGACATGGGCTT
CTCCAATACAGGGTCAGGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAAAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGATTTGACTTCTCACAA
GCTCAGTTTTCAGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTTAGGTTGACAAATATAGTGTGGCATTTATAACTTGCATGGGCGTGACATTCGGTA
AATAATGTAGATTTTCTACTGGTCTTGATTTATGCAATCCCTGTCTGTAATGACCGCGATTGTGAGAAGAATATGTACCGAGTCTATGTGCAATTGCTGTAATGAAGTGA
AAATATATGGGTGATATAAATTTAACTACCAACATTTTGTATTTTAACCTTCTATTTGGTTTGATATAAACAAGAGTTCCAAATTTGATAGCAGGTGTCAGTTCATGTTA
AAAGTATCTAACGATATCATCACTCTATATATTTGTTTACCCAAATCCCATTCCCAGTAAAATAGAGAATGGACAAGCAAATTATGTTCCAA
Protein sequenceShow/hide protein sequence
MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQKRLMLQ
RFQEENPGFDFSQAQFSGNCPDPRTFMGGIRLG