; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G012880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G012880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING/U-box superfamily protein
Genome locationchr02:17237013..17240127
RNA-Seq ExpressionLsi02G012880
SyntenyLsi02G012880
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031815.1 E3 ubiquitin-protein ligase RNF8-A [Cucumis melo var. makuwa]6.7e-11095.1Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAP FLFLVQWTDCYLAGALGLLRIL+YVTYPDGKTTMSIYERKASI+EFYVVIFPSLLQLQKGITELEDRKQKEVCNARY+RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SIL DN KRLFAYIDKLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        +DS+
Subjt:  LDSY

XP_008457378.1 PREDICTED: E3 ubiquitin-protein ligase RNF8-A [Cucumis melo]6.7e-11095.1Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAP FLFLVQWTDCYLAGALGLLRIL+YVTYPDGKTTMSIYERKASI+EFYVVIFPSLLQLQKGITELEDRKQKEVCNARY+RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SIL DN KRLFAYIDKLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        +DS+
Subjt:  LDSY

XP_011658560.1 E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus]4.2e-11297.06Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARY+RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SIL DNRKRLFAYIDKLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        +DS+
Subjt:  LDSY

XP_023518974.1 E3 ubiquitin-protein ligase rnf8-A-like [Cucurbita pepo subsp. pepo]7.4e-10994.61Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQ+GITELEDRKQKEVCNARY RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICME N MVVLPNCNHSLCL CYRDWR RSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SILQDNRKRLFAYI+KLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        LDS+
Subjt:  LDSY

XP_038893737.1 E3 ubiquitin-protein ligase AIRP2 [Benincasa hispida]2.4e-11297.06Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICMEFNGMVVLPNCNHSLCLKCY+DWRGRSQSCPFCRDSLKRVNS DLWIFTDKSEMIDL SILQDNRKRLFAYIDKLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        +DS+
Subjt:  LDSY

TrEMBL top hitse value%identityAlignment
A0A0A0LY84 RING-type domain-containing protein2.0e-11297.06Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARY+RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SIL DNRKRLFAYIDKLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        +DS+
Subjt:  LDSY

A0A1S3C5C5 E3 ubiquitin-protein ligase RNF8-A3.2e-11095.1Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAP FLFLVQWTDCYLAGALGLLRIL+YVTYPDGKTTMSIYERKASI+EFYVVIFPSLLQLQKGITELEDRKQKEVCNARY+RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SIL DN KRLFAYIDKLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        +DS+
Subjt:  LDSY

A0A5A7SRP4 E3 ubiquitin-protein ligase RNF8-A3.2e-11095.1Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAP FLFLVQWTDCYLAGALGLLRIL+YVTYPDGKTTMSIYERKASI+EFYVVIFPSLLQLQKGITELEDRKQKEVCNARY+RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SIL DN KRLFAYIDKLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        +DS+
Subjt:  LDSY

A0A6J1HMH6 E3 ubiquitin-protein ligase rnf8-B-like1.8e-10894.12Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQ+GITELEDRKQKEVCNARY RRDE GRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICME N MVVLPNCNHSLCL CYRDWR RSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDL SILQDNRKRLFAYI+KLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        LDS+
Subjt:  LDSY

A0A6J1I3Y6 E3 ubiquitin-protein ligase rnf8-A-like1.4e-10893.63Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTM+IYERKASIREFYVVIFPSLLQLQ+GITELEDRKQKEVCNARY RRDEFGRGKLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EID+EREKECGICME N MVVLPNCNHSLCL CYRDWR RSQSCPFCRDSLKRVNSGDLWIFTDKSEM+DL SILQDNRKRLF YI+KLPLVVPDPVFLP
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Query:  LDSY
        LDS+
Subjt:  LDSY

SwissProt top hitse value%identityAlignment
Q13064 Probable E3 ubiquitin-protein ligase makorin-33.2e-0636.62Show/hide
Query:  EKECGICMEF---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRDSLKRVNSGDLWI
        +K CGICME              +L NCNHS C++C R WR   Q       SCP CR + + V   + W+
Subjt:  EKECGICMEF---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRDSLKRVNSGDLWI

Q13434 Putative E3 ubiquitin-protein ligase makorin-41.4e-0634.21Show/hide
Query:  IDLEREKECGICMEF---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRDSLKRVNSGDLWI
        +   ++K CGICME          +   +L NCNH+ CLKC R WR   +       SCP CR +   V   + W+
Subjt:  IDLEREKECGICMEF---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRDSLKRVNSGDLWI

Q4SRI6 Probable E3 ubiquitin-protein ligase makorin-11.9e-0632.29Show/hide
Query:  IDLEREKECGICMEF---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKR
        I   ++  CG+CME              +L NCNH  CLKC R WR   Q       SCP CR +   V   + W+  DK +   L    +D   R
Subjt:  IDLEREKECGICMEF---------NGMVVLPNCNHSLCLKCYRDWRGRSQ-------SCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKR

Q8VC56 E3 ubiquitin-protein ligase RNF84.2e-0638.27Show/hide
Query:  LEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLK-RVNSGDLWIFTDKSEMID-LASILQDNRKRL
        LE E +C IC E+    V  NC HS C  C  +W  R   CP CR  ++ R NS  L +    S+M+D L+S +++ R  L
Subjt:  LEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLK-RVNSGDLWIFTDKSEMID-LASILQDNRKRL

Q9M022 E3 ubiquitin-protein ligase AIRP26.7e-8169.5Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAA  FLFL+QWTDC+ AGALGLLRILIY  Y DGKTTMS++ERK SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ RY ++D   +GK+S
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EIDLERE+ECGIC+E    VVLP CNHS+C+ CYR+WR RSQSCPFCR SLKRVNSGDLWI+T  +E+ DL +I ++N KRL  YIDKLPLV  DP  +P
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

Arabidopsis top hitse value%identityAlignment
AT3G47160.1 RING/U-box superfamily protein1.5e-8873.74Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSY+PAA F LFLVQWTDC+LAG LGLLR+LIY+TY DGKTTMS+YERK SI++FY VIFPSLLQL++GIT+L+DRKQKEVC  RY  +DE  + KLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF
        EID+ERE+ECGICME N MVVLPNC HSLC+KCYRDW GRS+SCPFCRDSLKRVNSGDLW+  +KS+ +++ +I ++N+KRLF YI+KLPLVVPD VF
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF

AT3G47160.2 RING/U-box superfamily protein1.5e-8873.74Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSY+PAA F LFLVQWTDC+LAG LGLLR+LIY+TY DGKTTMS+YERK SI++FY VIFPSLLQL++GIT+L+DRKQKEVC  RY  +DE  + KLS
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF
        EID+ERE+ECGICME N MVVLPNC HSLC+KCYRDW GRS+SCPFCRDSLKRVNSGDLW+  +KS+ +++ +I ++N+KRLF YI+KLPLVVPD VF
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF

AT5G01520.1 RING/U-box superfamily protein4.8e-8269.5Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSPAA  FLFL+QWTDC+ AGALGLLRILIY  Y DGKTTMS++ERK SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ RY ++D   +GK+S
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP
        EIDLERE+ECGIC+E    VVLP CNHS+C+ CYR+WR RSQSCPFCR SLKRVNSGDLWI+T  +E+ DL +I ++N KRL  YIDKLPLV  DP  +P
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLP

AT5G58787.1 RING/U-box superfamily protein1.3e-8471.72Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSP A FFLFLVQWTDC LAG LGLLR+LIY+TY DGKTTMS+YERKASIREF  VI PSL QLQ+G+T+++D KQKEVC  RY ++DE    ++S
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF
        EI++ERE+ECGICME N  VVLPNC HSLC+KCYRDWRGRSQSCPFCRDSLKRV+SGDLW+F D+++ ++L +I ++N+KRLF YI+KLPLVVPD V+
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF

AT5G58787.2 RING/U-box superfamily protein1.1e-7566.67Show/hide
Query:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS
        MRLSYSP A FFLFLVQWTDC LAG LGLLR+LIY+TY DGKTTMS+YERKASIREF                +++D KQKEVC  RY ++DE    ++S
Subjt:  MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLS

Query:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF
        EI++ERE+ECGICME N  VVLPNC HSLC+KCYRDWRGRSQSCPFCRDSLKRV+SGDLW+F D+++ ++L +I ++N+KRLF YI+KLPLVVPD V+
Subjt:  EIDLEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTATCATACAGCCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGATTGTTACCTTGCTGGTGCATTGGGGCTGTTAAGAATCCTTATCTATGTGAC
TTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAAGCAAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAAGGCATCACAG
AATTGGAAGATAGAAAGCAAAAAGAGGTCTGCAATGCCAGGTACAACAGAAGGGATGAATTTGGAAGAGGAAAACTTTCAGAAATCGACTTAGAAAGAGAGAAGGAGTGT
GGAATTTGCATGGAGTTTAATGGCATGGTTGTTTTGCCCAACTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGACTGGCGCGGTCGTTCTCAGTCGTGTCCCTTCTG
TCGAGATAGCCTCAAGAGAGTCAACTCCGGCGACCTTTGGATCTTCACAGATAAGAGTGAAATGATTGATCTAGCTTCGATTTTGCAGGACAACCGCAAGAGACTATTTG
CATACATAGATAAGTTGCCATTAGTAGTTCCTGATCCAGTGTTTCTTCCTCTTGACTCATATTAG
mRNA sequenceShow/hide mRNA sequence
GTTTGCTTAGAGAGAATTTCTACTTTGTAATCTCCTTTTCGGATTTTTCATTACCGAAATTTTTATTTCTTCCTTTTCTGTTTGATTATGAGGATAATCTGTAGGGTTTC
GGCTCGAGATTTTGATTCTATTTGATTCATCGTTTCGTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGATTATCATA
CAGCCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGATTGTTACCTTGCTGGTGCATTGGGGCTGTTAAGAATCCTTATCTATGTGACTTATCCAGATGGAA
AGACCACCATGTCCATTTATGAGCGAAAAGCAAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAAGGCATCACAGAATTGGAAGATAGA
AAGCAAAAAGAGGTCTGCAATGCCAGGTACAACAGAAGGGATGAATTTGGAAGAGGAAAACTTTCAGAAATCGACTTAGAAAGAGAGAAGGAGTGTGGAATTTGCATGGA
GTTTAATGGCATGGTTGTTTTGCCCAACTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGACTGGCGCGGTCGTTCTCAGTCGTGTCCCTTCTGTCGAGATAGCCTCA
AGAGAGTCAACTCCGGCGACCTTTGGATCTTCACAGATAAGAGTGAAATGATTGATCTAGCTTCGATTTTGCAGGACAACCGCAAGAGACTATTTGCATACATAGATAAG
TTGCCATTAGTAGTTCCTGATCCAGTGTTTCTTCCTCTTGACTCATATTAGGTGAGAGAATGTGGGATACAGTGATCAATCTGTGAGTATTAATTAGTTCTTTATCCAAA
AGAATCTGTGAGTAGTAGGTGAAGTTTCTGTATATATAATTATAGCTTTGACGAGAGAGATAAGTTGGGAAATGTAAAAAGGGGTATGTCTGGCTAATGCTAGGATGTTG
CTAATTTTCAGTTTCTTAGCTTATCAAAGTGAATGATTTTTGTTCACTCAATTGTTCTCATTTCACCCTCCCCAATCAATGCAAAAATCTTCATTGAAATATCTGGAAAT
CAAATTATTATTCATATATATATACACAT
Protein sequenceShow/hide protein sequence
MRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYNRRDEFGRGKLSEIDLEREKEC
GICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKSEMIDLASILQDNRKRLFAYIDKLPLVVPDPVFLPLDSY