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Lsi02G013060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmaternal effect embryo arrest 59
Genome locationchr02:17469850..17474460
RNA-Seq ExpressionLsi02G013060
SyntenyLsi02G013060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031798.1 uncharacterized protein E6C27_scaffold848G00400 [Cucumis melo var. makuwa]1.0e-7689.38Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKV  ED+Y PEL EFQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRN
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA  DCCHGSCRGNPATNDWIPA+ND   N
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRN
XP_004154227.2 uncharacterized protein LOC101210530 isoform X2 [Cucumis sativus]4.5e-7788.89Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK   ED+Y PEL EFQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRNGT
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA   CCHGSCRGNPATNDWIPA+NDL  N T
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRNGT
XP_011658480.2 uncharacterized protein LOC101210530 isoform X4 [Cucumis sativus]2.3e-7690.45Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK   ED+Y PEL EFQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA   CCHGSCRGNPATNDWIPA+NDL
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
XP_038893549.1 uncharacterized protein LOC120082446 isoform X1 [Benincasa hispida]3.2e-7891.72Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MENGRRPGRSDARLSMEEEREMEAKTREYFN VAPKRHTKPQRSEFSAHYVDKV G++DY PEL EFQRLESDP+ERLTYD RNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
        NCADKQHHTTGTGFIKMENGDCKGF L+ADSAT  CCHGSCRGNPA NDWIPATNDL
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
XP_038893550.1 uncharacterized protein LOC120082446 isoform X2 [Benincasa hispida]3.2e-7891.72Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MENGRRPGRSDARLSMEEEREMEAKTREYFN VAPKRHTKPQRSEFSAHYVDKV G++DY PEL EFQRLESDP+ERLTYD RNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
        NCADKQHHTTGTGFIKMENGDCKGF L+ADSAT  CCHGSCRGNPA NDWIPATNDL
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
TrEMBL top hitse value%identityAlignment
A0A0A0M0Q2 Uncharacterized protein1.1e-7690.45Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK   ED+Y PEL EFQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA   CCHGSCRGNPATNDWIPA+NDL
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDL
A0A1S3C5E6 uncharacterized protein LOC103497099 isoform X21.4e-7688.75Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKV  ED+Y PEL +FQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRN
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA  DCCHGSCRGNPATNDWIPA+ND   N
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRN
A0A1S3C6Q6 uncharacterized protein LOC103497099 isoform X41.9e-7690.38Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKV  ED+Y PEL +FQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATND
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA  DCCHGSCRGNPATNDWIPA+ND
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATND
A0A5A7SMD8 Uncharacterized protein4.9e-7789.38Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKV  ED+Y PEL EFQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRN
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA  DCCHGSCRGNPATNDWIPA+ND   N
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRN
A0A5D3BE87 Uncharacterized protein1.9e-7690.38Show/hide
Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKV  ED+Y PEL +FQRLESDP+ERLTYDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDL

Query:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATND
        NC DKQHHTTGTGFIKMENGDCKGF LA DSA  DCCHGSCRGNPATNDWIPA+ND
Subjt:  NCADKQHHTTGTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATND
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G37300.1 maternal effect embryo arrest 593.8e-2140.94Show/hide
Query:  RPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSE------FSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDD
        +P RSD     E++ +   + R  F+ +APKR TKP RSE      FSA   DK+T      PE  +FQ L+S  + ++  +G +  + +EF+ET+YY +
Subjt:  RPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSE------FSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDD

Query:  LNCADKQHHTTGTGFI---KMENGDCKGFSLAADSATGDCCHGSC-RGNPATNDWIPAT-NDLDRNGTIAP
        L   DKQHHTTG+GFI   K +NG+      AA  A GD    +  R NPATN+WIPAT  D D   +  P
Subjt:  LNCADKQHHTTGTGFI---KMENGDCKGFSLAADSATGDCCHGSC-RGNPATNDWIPAT-NDLDRNGTIAP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACGGCAGAAGGCCTGGAAGGAGTGACGCTCGTCTATCCATGGAGGAAGAAAGAGAAATGGAGGCCAAAACTCGAGAGTACTTCAATGGCGTCGCACCGAAGCG
CCACACTAAGCCTCAGCGCAGCGAGTTCTCTGCGCATTACGTTGACAAAGTAACTGGCGAGGACGATTACAGTCCTGAACTCACCGAGTTTCAGCGCCTTGAATCTGATC
CTAATGAGAGACTTACCTATGATGGCCGTAACGGCAAGATCTCTGAGGAATTTGTGGAGACGAAGTATTACGACGATCTCAATTGTGCAGACAAACAGCACCATACGACA
GGAACAGGATTCATAAAAATGGAGAACGGAGATTGCAAAGGCTTCAGCCTCGCAGCAGATTCTGCAACTGGCGATTGCTGCCATGGCTCTTGCAGGGGTAATCCGGCGAC
CAACGACTGGATTCCAGCCACTAATGATCTGGATCGGAACGGAACAATTGCACCGTACGCTCGACGAATTCATCACACTAAGCTACGTAGACCATGGCTATGCGGTAGAA
GTGAAAGAGATGAAGAGCTTGGGATTTTAGCGAGCACTCGAAGAGAGGGAGAGGACGATCGAGTGGAGAAGAAACATGAGAGAAGAAATTGA
mRNA sequenceShow/hide mRNA sequence
CCAACATTTTTTAAAAATTACAAATATAGCAAAATCTATGGATGATGATAGAGTCGGTCATTAGCCATAGATAGATTTTTGTTAATAATATAGTCTATCACTAATAAACT
TCGAGAACTAATTTAAATTTTGCTATCTTACAACTGTTCCAAACTTTAGGATATATTTCATTGGAAAAATTTCAGTTGCAGTGTACCTATCTCTTGTATAGCCCGACTAG
TCTCTAATGAAATTGTGTCATGTGGCACAATATTTTTTAAAAAAATAATTTTTTTTATTTTGTGAGTAAAAGAAAGGAAGAATATGGAATAAGGCTAAAACTAATCATTT
CTTTATTTCATTTTGGCCCAAATTTTGATTCATAATCATATGTACGACTCTCCCAAAAATATCTTCCATTTCATTGATTCTATCCCTACAAAACCGACTCATCTTTCGTT
CAAATGCTCCTACTACTACTACTGCACCCATAAATCAATCTACTGAACCACAAAGACGATCGAAGAATCAAATTCAGAGAATCAACAGCAATGGAGAACGGCAGAAGGCC
TGGAAGGAGTGACGCTCGTCTATCCATGGAGGAAGAAAGAGAAATGGAGGCCAAAACTCGAGAGTACTTCAATGGCGTCGCACCGAAGCGCCACACTAAGCCTCAGCGCA
GCGAGTTCTCTGCGCATTACGTTGACAAAGTAACTGGCGAGGACGATTACAGTCCTGAACTCACCGAGTTTCAGCGCCTTGAATCTGATCCTAATGAGAGACTTACCTAT
GATGGCCGTAACGGCAAGATCTCTGAGGAATTTGTGGAGACGAAGTATTACGACGATCTCAATTGTGCAGACAAACAGCACCATACGACAGGAACAGGATTCATAAAAAT
GGAGAACGGAGATTGCAAAGGCTTCAGCCTCGCAGCAGATTCTGCAACTGGCGATTGCTGCCATGGCTCTTGCAGGGGTAATCCGGCGACCAACGACTGGATTCCAGCCA
CTAATGATCTGGATCGGAACGGAACAATTGCACCGTACGCTCGACGAATTCATCACACTAAGCTACGTAGACCATGGCTATGCGGTAGAAGTGAAAGAGATGAAGAGCTT
GGGATTTTAGCGAGCACTCGAAGAGAGGGAGAGGACGATCGAGTGGAGAAGAAACATGAGAGAAGAAATTGA
Protein sequenceShow/hide protein sequence
MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVTGEDDYSPELTEFQRLESDPNERLTYDGRNGKISEEFVETKYYDDLNCADKQHHTT
GTGFIKMENGDCKGFSLAADSATGDCCHGSCRGNPATNDWIPATNDLDRNGTIAPYARRIHHTKLRRPWLCGRSERDEELGILASTRREGEDDRVEKKHERRN