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Lsi02G013170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmitochondrial import inner membrane translocase subunit TIM10
Genome locationchr02:17611273..17616526
RNA-Seq ExpressionLsi02G013170
SyntenyLsi02G013170
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583395.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3781.63Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

XP_004145269.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus]7.4e-3985.71Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

XP_022964898.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita moschata]6.9e-3781.63Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

XP_022970585.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima]8.2e-3882.65Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPN+MPSA+DKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

XP_038894964.1 mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida]2.8e-3884.69Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNK             LT SCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

TrEMBL top hitse value%identityAlignment
A0A0A0LVG1 zf-Tim10_DDP domain-containing protein3.6e-3985.71Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

A0A1S3C655 mitochondrial import inner membrane translocase subunit TIM103.6e-3985.71Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

A0A5D3BDG9 Mitochondrial import inner membrane translocase subunit TIM10-like3.6e-3985.71Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

A0A6J1HM98 mitochondrial import inner membrane translocase subunit TIM10-like3.4e-3781.63Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

A0A6J1I395 mitochondrial import inner membrane translocase subunit TIM10-like4.0e-3882.65Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASPN+MPSA+DKEQIFGMAEKEMEYRVELFNK             LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

SwissProt top hitse value%identityAlignment
Q2NKR1 Mitochondrial import inner membrane translocase subunit Tim101.6e-0738.89Show/hide
Query:  AEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL
        AE E+E   +++N             R+T +C  KCV   YKE+EL+ GE+ C+DRCVSKY  +   +G+ L
Subjt:  AEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL

Q4QR62 Mitochondrial import inner membrane translocase subunit Tim10-A5.4e-0840.28Show/hide
Query:  AEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL
        AE E+E   +++N L           R+T +C  KCV   YKE+EL+ GE+ C+DRCVSKY  +   +G+ L
Subjt:  AEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL

Q9UTE9 Mitochondrial import inner membrane translocase subunit tim109.2e-0837.33Show/hide
Query:  QIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ
        Q   MAE+E+E   ++FN             RL  +C  KC+  +Y E++L  GE+ CIDRCVSKY+     + Q
Subjt:  QIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ

Q9W2D6 Mitochondrial import inner membrane translocase subunit Tim102.4e-0838.55Show/hide
Query:  SAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL
        S  D+ ++  M E E+E   +L+N             R+T +C  KC+  RY ESEL  GE  CIDRCV+KY  +   IG+ L
Subjt:  SAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL

Q9ZW33 Mitochondrial import inner membrane translocase subunit TIM104.2e-2964.29Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASP  +P  V KEQ F MA+ EMEYRVELFNK             L Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

Arabidopsis top hitse value%identityAlignment
AT2G29530.1 Tim10/DDP family zinc finger protein3.0e-3064.29Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASP  +P  V KEQ F MA+ EMEYRVELFNK             L Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

AT2G29530.2 Tim10/DDP family zinc finger protein3.0e-3064.29Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI
        MASP  +P  V KEQ F MA+ EMEYRVELFNK             L Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPI

AT2G29530.3 Tim10/DDP family zinc finger protein1.5e-2959.63Show/hide
Query:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFN----KLTQSCFNKC-------VDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ
        MASP  +P  V KEQ F MA+ EMEYRVELFN    KL +  F          + + L Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQ
Subjt:  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFN----KLTQSCFNKC-------VDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ

Query:  LLGSGRPPI
        LL +G+PP+
Subjt:  LLGSGRPPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCCGAACAATATGCCATCGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACAATC
ATGTTTTAACAAATGTGTTGATAAGAGGCTTACACAATCATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTG
ACCGCTGCGTGTCCAAGTATTGGCATGTAACCAATTTAATCGGCCAGCTACTCGGGTCTGGCAGACCTCCAATTGTTCAGCCGGAAACATCAACGGACTTTACATCCGTT
TTCGTTTTTTCCGCCTTCGGCACCGTCACGGTTAAAACTCCGTTCTCCATTGATGCCCTAATTTCCTCCATTTTCGCATCCTCCGGCATCCTGAATCTCCTCTGA
mRNA sequenceShow/hide mRNA sequence
TTCGATTATTTTTTCTTTTTTTCACTCCTTAACGTTGAGAATTGTACGACTCGAGAACCCTACAAATAAGTATACCTTTAAACCTAAAATCAAAAAGTATCAACTTGGTA
AAATTCTTGGCATCGCATCGTCCCAGGGATTTAGCAGCGGGGTTTTGCCTCCTTCATCTACTACTGATCAGATTCATCAAACCCACCAAAACCCAGAGCTTCGATCTTGA
AAATTTGAATTCACATTTCATTTGAAAGTCTCAATGGCTTCTCCGAACAATATGCCATCGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATA
TCGAGTTGAATTGTTCAACAAGCTTACACAATCATGTTTTAACAAATGTGTTGATAAGAGGCTTACACAATCATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAAT
CTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGCGTGTCCAAGTATTGGCATGTAACCAATTTAATCGGCCAGCTACTCGGGTCTGGCAGACCTCCAATTGTT
CAGCCGGAAACATCAACGGACTTTACATCCGTTTTCGTTTTTTCCGCCTTCGGCACCGTCACGGTTAAAACTCCGTTCTCCATTGATGCCCTAATTTCCTCCATTTTCGC
ATCCTCCGGCATCCTGAATCTCCTCTGA
Protein sequenceShow/hide protein sequence
MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPIVQPETSTDFTSV
FVFSAFGTVTVKTPFSIDALISSIFASSGILNLL