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Lsi02G013230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCopper transporter
Genome locationchr02:17687817..17688209
RNA-Seq ExpressionLsi02G013230
SyntenyLsi02G013230
Gene Ontology termsGO:0006878 - cellular copper ion homeostasis (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005375 - copper ion transmembrane transporter activity (molecular function)
InterPro domainsIPR007274 - Ctr copper transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031772.1 putative Copper transporter [Cucumis melo var. makuwa]4.3e-5484.62Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        METHMTF+WGKT EILF GWPGRSFFSY VALIFVFLLAFTVEWLSHTK T    GN+TAGLVQT+LYG+RVGLAFIVMLAVMSYNVGVLLAAV GYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGSRVF RSK+D NL LD  DLPPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

TYJ97360.1 putative Copper transporter [Cucumis melo var. makuwa]1.3e-5383.85Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        METHMTF+WGKT EILF GWPGRSFFSY VALIFVFLLAFTVEWLSHTK T    GN+TAGLVQT+LYG+RVGLAFIVMLAVMSYNVGVLLAAV GYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGS+VF RSK+D NL LD  DLPPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

XP_022948639.1 copper transporter 1-like [Cucurbita moschata]4.6e-4878.46Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        ME HMTFFWGK+AEILFAGWPGR+  SYA+AL+FVFL+AF VEWLSHTKLTAS   +V AG VQT LYG+RVGLAF+VMLAVMS+NVGVLLAAVAGYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGSRVF RSKID NL +   D+PPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

XP_022998910.1 copper transporter 1-like [Cucurbita maxima]2.7e-4878.46Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        ME HMTFFWGK+AEILFAGWPGRS  SYA+AL+F+FL+AF VEWLSHTKLTAS   +V AG VQT LYG+RVGLAF+VMLAVMS+NVGVLLAAVAGYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGSRVF RSKID NL +   D+PPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

XP_023525766.1 copper transporter 1-like [Cucurbita pepo subsp. pepo]2.1e-4879.23Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        ME HMTFFWGK+AEILFAGWPGRS  SYA+AL+FVFL+AF VEWLSHTKLTAS   +V AG VQT LYG+RVGLAF+VMLAVMS+NVGVLLAAVAGYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGSRVF RSKID NL +   D+PPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

TrEMBL top hitse value%identityAlignment
A0A0A0LXH5 Copper transporter3.6e-5484.62Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        METHMTF+WGKT EILF GWPGRSFFS  + LIFVFLLAFTVEWLSHTK T SA  N+TAGLVQT+LYGIRVGLAFIVMLAVMSYNVG+LLAAV GYSIG
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGS++F RSKIDPNL LDS DLPPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

A0A5A7SL08 Copper transporter2.1e-5484.62Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        METHMTF+WGKT EILF GWPGRSFFSY VALIFVFLLAFTVEWLSHTK T    GN+TAGLVQT+LYG+RVGLAFIVMLAVMSYNVGVLLAAV GYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGSRVF RSK+D NL LD  DLPPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

A0A5D3BC00 Copper transporter6.1e-5483.85Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        METHMTF+WGKT EILF GWPGRSFFSY VALIFVFLLAFTVEWLSHTK T    GN+TAGLVQT+LYG+RVGLAFIVMLAVMSYNVGVLLAAV GYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGS+VF RSK+D NL LD  DLPPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

A0A6J1GAH5 Copper transporter2.2e-4878.46Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        ME HMTFFWGK+AEILFAGWPGR+  SYA+AL+FVFL+AF VEWLSHTKLTAS   +V AG VQT LYG+RVGLAF+VMLAVMS+NVGVLLAAVAGYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGSRVF RSKID NL +   D+PPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

A0A6J1KDT9 Copper transporter1.3e-4878.46Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        ME HMTFFWGK+AEILFAGWPGRS  SYA+AL+F+FL+AF VEWLSHTKLTAS   +V AG VQT LYG+RVGLAF+VMLAVMS+NVGVLLAAVAGYS+G
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        FLVYGSRVF RSKID NL +   D+PPLNC
Subjt:  FLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

SwissProt top hitse value%identityAlignment
Q39065 Copper transporter 11.0e-2950.38Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATG---NVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGY
        M  HMTFFWGK  E+LF+GWPG S   YA+ LIFVF LA   EWL+H+ L   +TG   N  AGL+QT +Y +R+GLA++VMLAVMS+N GV L A+AG+
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATG---NVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGY

Query:  SIGFLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        ++GF+++GS+ F  +  D         +PP  C
Subjt:  SIGFLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

Q5ZD08 Copper transporter 33.6e-1949.07Show/hide
Query:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKL-TASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFL
        HMTF+WGK +EILF GWPG S   YA+AL  VF LA  +E+L   ++  +S+ G+         ++ +RVGLA+++MLA+MS+NVGVLLAAVAG++ GFL
Subjt:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKL-TASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFL

Query:  VYGSRVFG
         + + + G
Subjt:  VYGSRVFG

Q8GWP3 Copper transporter 64.4e-2554.21Show/hide
Query:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFL
        HMTFFWGK  EILF+GWPG S   Y + LI VFLLA  VEWL+H+  L    + +   GLVQT +Y ++ GLA++VMLAVMS+N GV + A+AG+++GF+
Subjt:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFL

Query:  VYGSRVF
        ++GS  F
Subjt:  VYGSRVF

Q9FGU8 Copper transporter 31.0e-2149.06Show/hide
Query:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFLV
        HMTFFWGKT E+LF GWPG S   Y V L  +F+++   E LS      S   ++  GL+QT +Y +R  L+++VMLAVMS+N GV +AA+AG+ +GF++
Subjt:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFLV

Query:  YGSRVF
        +GSR F
Subjt:  YGSRVF

Q9STG2 Copper transporter 21.0e-2651.72Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSI
        M  HMTFFWGK  E+LF+GWPG S   YA+ LI +FLLA   EWL+H+  L  S + N  AGL QT +Y ++ GL+++VMLAVMS+N GV + A+AGY +
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSI

Query:  GFLVYGSRVFGRSKID
        GF ++GS  F +   D
Subjt:  GFLVYGSRVFGRSKID

Arabidopsis top hitse value%identityAlignment
AT2G26975.1 Ctr copper transporter family3.1e-2654.21Show/hide
Query:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFL
        HMTFFWGK  EILF+GWPG S   Y + LI VFLLA  VEWL+H+  L    + +   GLVQT +Y ++ GLA++VMLAVMS+N GV + A+AG+++GF+
Subjt:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFL

Query:  VYGSRVF
        ++GS  F
Subjt:  VYGSRVF

AT2G37925.1 copper transporter 44.1e-1842.2Show/hide
Query:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTAS---ATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG
        H TF+WG   ++LF+GWPG     YA+ALIFVF LAF  EWL+     +S       +     +T +Y ++ G +++V+LAV+S+N GV LAA+ G+++G
Subjt:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTAS---ATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIG

Query:  FLVYGSRVF
        F V+  R F
Subjt:  FLVYGSRVF

AT3G46900.1 copper transporter 27.4e-2851.72Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSI
        M  HMTFFWGK  E+LF+GWPG S   YA+ LI +FLLA   EWL+H+  L  S + N  AGL QT +Y ++ GL+++VMLAVMS+N GV + A+AGY +
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTK-LTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSI

Query:  GFLVYGSRVFGRSKID
        GF ++GS  F +   D
Subjt:  GFLVYGSRVFGRSKID

AT5G59030.1 copper transporter 17.1e-3150.38Show/hide
Query:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATG---NVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGY
        M  HMTFFWGK  E+LF+GWPG S   YA+ LIFVF LA   EWL+H+ L   +TG   N  AGL+QT +Y +R+GLA++VMLAVMS+N GV L A+AG+
Subjt:  METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATG---NVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGY

Query:  SIGFLVYGSRVFGRSKIDPNLTLDSPDLPPLNC
        ++GF+++GS+ F  +  D         +PP  C
Subjt:  SIGFLVYGSRVFGRSKIDPNLTLDSPDLPPLNC

AT5G59040.1 copper transporter 37.2e-2349.06Show/hide
Query:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFLV
        HMTFFWGKT E+LF GWPG S   Y V L  +F+++   E LS      S   ++  GL+QT +Y +R  L+++VMLAVMS+N GV +AA+AG+ +GF++
Subjt:  HMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFLV

Query:  YGSRVF
        +GSR F
Subjt:  YGSRVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCCACATGACATTTTTCTGGGGAAAGACGGCGGAGATTCTCTTCGCCGGCTGGCCTGGCCGGAGCTTTTTCTCTTACGCCGTTGCTTTAATCTTCGTTTTTCT
CCTCGCCTTCACCGTGGAGTGGCTGTCGCACACTAAACTCACAGCCTCTGCCACCGGCAACGTCACTGCTGGCCTGGTTCAGACCGTCCTGTACGGCATCCGGGTGGGGC
TGGCTTTTATCGTCATGCTGGCCGTCATGTCGTATAATGTTGGAGTTCTGCTCGCGGCGGTGGCCGGATATTCAATCGGGTTCTTGGTATATGGAAGTCGGGTTTTTGGT
CGATCGAAAATTGACCCGAATTTGACTTTAGATTCGCCTGATCTTCCACCACTTAATTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCCACATGACATTTTTCTGGGGAAAGACGGCGGAGATTCTCTTCGCCGGCTGGCCTGGCCGGAGCTTTTTCTCTTACGCCGTTGCTTTAATCTTCGTTTTTCT
CCTCGCCTTCACCGTGGAGTGGCTGTCGCACACTAAACTCACAGCCTCTGCCACCGGCAACGTCACTGCTGGCCTGGTTCAGACCGTCCTGTACGGCATCCGGGTGGGGC
TGGCTTTTATCGTCATGCTGGCCGTCATGTCGTATAATGTTGGAGTTCTGCTCGCGGCGGTGGCCGGATATTCAATCGGGTTCTTGGTATATGGAAGTCGGGTTTTTGGT
CGATCGAAAATTGACCCGAATTTGACTTTAGATTCGCCTGATCTTCCACCACTTAATTGTTAG
Protein sequenceShow/hide protein sequence
METHMTFFWGKTAEILFAGWPGRSFFSYAVALIFVFLLAFTVEWLSHTKLTASATGNVTAGLVQTVLYGIRVGLAFIVMLAVMSYNVGVLLAAVAGYSIGFLVYGSRVFG
RSKIDPNLTLDSPDLPPLNC