; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G013270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationchr02:17759783..17763474
RNA-Seq ExpressionLsi02G013270
SyntenyLsi02G013270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583402.1 hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5361.73Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQASSFVADLFDVKEPP +S+S VFAAIFPSPQK                        GGGRN SSSGDWLKQ NGNQP H RQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGTNNVMDEVVLFIIRTSALPRWRMNSHLFSKGAAWAVRWDNLYRIYLL
        YYGGQDGYSQAPSAG SPSP PT+KKSGGEDDPNGNN QPASRGNWWQGT+    +  L ++     P ++    + ++ A W+   D  Y +Y +
Subjt:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGTNNVMDEVVLFIIRTSALPRWRMNSHLFSKGAAWAVRWDNLYRIYLL

XP_008457434.1 PREDICTED: uncharacterized protein LOC103497123 [Cucumis melo]6.2e-5275.82Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQ SSFVADLFDVKE PLSSASG FA IFPSPQK                        G GRN SSS DWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAGPSP PPP  TMKKSGG +DDPNGNNSQPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT

XP_022964980.1 uncharacterized protein LOC111464929 [Cucurbita moschata]2.8e-5275.33Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQASSFVADLFDVKEPP +S+S VFAAIFPSPQK                        GGGRN SSSGDWLKQ NGNQP H RQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAG SPSP PT+KKSGGEDDPNGNN QPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT

XP_022970583.1 uncharacterized protein LOC111469517 [Cucurbita maxima]1.9e-5376Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQASSFVADLFDVKEPP +S+S VFAAIFPSPQK                        GGGRN SSSGDWLKQ NGNQP H RQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAGPSPSP PT+KKSGGEDDPNGNN QPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT

XP_038894691.1 uncharacterized protein LOC120083160 [Benincasa hispida]3.3e-5378Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQASSFVADLFDVKEPPLSS SGVFAAIF SPQK                        G GRN SSSGDWLKQTNGNQP HTRQGNS GSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAGPSP  PPTMKKSGGEDDPNGNNSQPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT

TrEMBL top hitse value%identityAlignment
A0A0A0LXG9 Uncharacterized protein3.3e-5175.16Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQASSFVADLFDVKE PLSSASG FA IFPSPQK                        G GRN SSS DWLKQTNG+QPHHTRQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQA SAGPSP PPP  TMKKSGG +DDPNGNNSQPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT

A0A1S3C5M6 uncharacterized protein LOC1034971233.0e-5275.82Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQ SSFVADLFDVKE PLSSASG FA IFPSPQK                        G GRN SSS DWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAGPSP PPP  TMKKSGG +DDPNGNNSQPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT

A0A5D3BEB7 Uncharacterized protein3.0e-5275.82Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQ SSFVADLFDVKE PLSSASG FA IFPSPQK                        G GRN SSS DWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAGPSP PPP  TMKKSGG +DDPNGNNSQPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPNGNNSQPASRGNWWQGT

A0A6J1HJ44 uncharacterized protein LOC1114649291.4e-5275.33Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQASSFVADLFDVKEPP +S+S VFAAIFPSPQK                        GGGRN SSSGDWLKQ NGNQP H RQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAG SPSP PT+KKSGGEDDPNGNN QPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT

A0A6J1I4B7 uncharacterized protein LOC1114695179.4e-5476Show/hide
Query:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL
        YQASSFVADLFDVKEPP +S+S VFAAIFPSPQK                        GGGRN SSSGDWLKQ NGNQP H RQGNSGGSLEPCHLSSSL
Subjt:  YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
        YYGGQDGYSQAPSAGPSPSP PT+KKSGGEDDPNGNN QPASRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein3.1e-0936.57Show/hide
Query:  SSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSP
        SS +G+F +IFP P  V       +LT  +G    +         P+  G+  K    N+   + Q  S  +  PC+LSSS+YYGGQD YS       S 
Subjt:  SSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSP

Query:  SPPPTMKKSGGEDDPNGNNSQPASRGNWWQGTNN
        + P   KK G E D     S+ ASRGNWW+G+ N
Subjt:  SPPPTMKKSGGEDDPNGNNSQPASRGNWWQGTNN

AT3G55646.1 unknown protein2.5e-0635.56Show/hide
Query:  SSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGG---RNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG
        SSA+G+F +IFP P    L           G  V      GG    ++P++ G+       N+       N   +  PCHLSSSLYYGGQ+ YS      
Subjt:  SSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGG---RNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG

Query:  PSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
         + +   T KK G E D     S+ ASRGNWW+G+
Subjt:  PSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).2.9e-1539.6Show/hide
Query:  ASSFVADLFDVKEPPLS-SASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLY
        +SS  ++LF  +E P S S+SG+  +IFP P KV+        T T GC+  +  + GG          + +    Q +H         ++PCHLSSS+Y
Subjt:  ASSFVADLFDVKEPPLS-SASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLY

Query:  YGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
        YGG D Y Q P    S S   T KK GGEDD     S  ASRGNWWQG+
Subjt:  YGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT

AT5G02020.2 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).2.0e-0834.86Show/hide
Query:  ASSFVADLFDVKEPPLS-SASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLY
        +SS  ++LF  +E P S S+SG+  +IFP P KV+        T T GC+  +  + GG          + +    Q +H         ++PCHLSSS+Y
Subjt:  ASSFVADLFDVKEPPLS-SASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLY

Query:  YGGQDGYSQ
        YGG D Y Q
Subjt:  YGGQDGYSQ

AT5G59080.1 unknown protein3.4e-1639.33Show/hide
Query:  ASSFVADLFDVKEP-PLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNS-GGSLEPCHLSSSL
        +SSF A+LF  K+P P SS+SG+F+ +FP P K                        G  R+ S+S       +G+Q       N+    +EPCHLSSSL
Subjt:  ASSFVADLFDVKEP-PLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNS-GGSLEPCHLSSSL

Query:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT
        YYGGQD Y+++ +    P P    ++  GEDD NG N Q  SRGNWWQG+
Subjt:  YYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCAAGCCTCCTCTTTCGTTGCCGATCTTTTCGATGTCAAGGAGCCGCCATTGTCATCCGCATCAGGAGTCTTTGCAGCAATCTTTCCATCTCCACAGAAGGTAATGCT
GCTCTTTTTGAACTGCTCCTTAACTCATACATCGGGCTGTTATGTGCTAAGGATTAGGAGGATGGGGGGAGGCAGGAATCCTTCTAGCTCTGGGGATTGGCTAAAACAGA
CCAATGGAAATCAACCACACCACACCAGACAAGGAAATTCAGGAGGGAGTTTGGAGCCTTGTCATCTGAGTTCATCTTTATACTATGGAGGACAAGATGGCTACTCCCAG
GCCCCATCAGCTGGACCATCCCCATCCCCACCCCCCACCATGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGGAAATTGGTG
GCAAGGTACTAATAATGTAATGGACGAAGTTGTTCTCTTTATTATTAGAACATCTGCCTTGCCTCGGTGGCGTATGAATTCCCACCTATTTTCTAAGGGAGCGGCGTGGG
CAGTGAGATGGGATAATCTGTATCGGATATACCTACTATGGTTTTGGAATTCATAA
mRNA sequenceShow/hide mRNA sequence
TATCAAGCCTCCTCTTTCGTTGCCGATCTTTTCGATGTCAAGGAGCCGCCATTGTCATCCGCATCAGGAGTCTTTGCAGCAATCTTTCCATCTCCACAGAAGGTAATGCT
GCTCTTTTTGAACTGCTCCTTAACTCATACATCGGGCTGTTATGTGCTAAGGATTAGGAGGATGGGGGGAGGCAGGAATCCTTCTAGCTCTGGGGATTGGCTAAAACAGA
CCAATGGAAATCAACCACACCACACCAGACAAGGAAATTCAGGAGGGAGTTTGGAGCCTTGTCATCTGAGTTCATCTTTATACTATGGAGGACAAGATGGCTACTCCCAG
GCCCCATCAGCTGGACCATCCCCATCCCCACCCCCCACCATGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGGAAATTGGTG
GCAAGGTACTAATAATGTAATGGACGAAGTTGTTCTCTTTATTATTAGAACATCTGCCTTGCCTCGGTGGCGTATGAATTCCCACCTATTTTCTAAGGGAGCGGCGTGGG
CAGTGAGATGGGATAATCTGTATCGGATATACCTACTATGGTTTTGGAATTCATAAAGCAGCAGAGAAGATGAAGCTTTGAAGTTGGATTTACATTTTATATTACATATT
GTGTATACTGTTTCAAATTTCTTGTTTGGTTTTTACTTTTACATTTGAAAATGGTGTGGAGTTTTCCGTATTTTCTTTTCTCTGATTTCTCTTTTATGAAAAGCTTTGCT
GTTTCTTATATTTGCTGTCTATGGTGAAAAATCCACATAAATAATCTTTCTAAAGAATTCCCTAATAATGATATTTAAGGATAAATGCAAATTAAGTCCTTTGCATG
Protein sequenceShow/hide protein sequence
YQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKVMLLFLNCSLTHTSGCYVLRIRRMGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQ
APSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRGNWWQGTNNVMDEVVLFIIRTSALPRWRMNSHLFSKGAAWAVRWDNLYRIYLLWFWNS