; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G013510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:18087378..18088389
RNA-Seq ExpressionLsi02G013510
SyntenyLsi02G013510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067747.1 hypothetical protein E6C27_scaffold352G00670 [Cucumis melo var. makuwa]4.8e-6791.72Show/hide
Query:  VILLDYCGSMGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGR
        V+LLD CGSMGKGRVRGMKLGPTSTIVFKSTPRQFTE EIH+E N+EDYQNVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGDLPYCIYKNPGR
Subjt:  VILLDYCGSMGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGR

Query:  VCSMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK
        VCSMRLQP STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTK
Subjt:  VCSMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK

KAG6583423.1 hypothetical protein SDJN03_19355, partial [Cucurbita argyrosperma subsp. sororia]7.0e-5895.12Show/hide
Query:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEA-NMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQP
        MGKGRVRGMKLGPT TIVFKSTPRQFTEIEIHNEA NMEDY+NVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGD PYCIYKNPGRVC M+LQP
Subjt:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEA-NMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQP

Query:  TSTQVFRSISHRNIRNEARMDQN
        TSTQVFRSISHRNIRNEARMDQN
Subjt:  TSTQVFRSISHRNIRNEARMDQN

KAG7019185.1 hypothetical protein SDJN02_18143, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6095.35Show/hide
Query:  MKLGPTSTIVFKSTPRQFTEIEIHNEA-NMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPTSTQVFRS
        MKLGPT TIVFKSTPRQFTEIEIHNEA NMEDY+NVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGD PYCIYKNPGRVC M+LQPTSTQVFRS
Subjt:  MKLGPTSTIVFKSTPRQFTEIEIHNEA-NMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPTSTQVFRS

Query:  ISHRNIRNEARMDQNVDTRLSILEAQMTK
        ISHRNIRNEARMDQNVDTRLSILEAQMTK
Subjt:  ISHRNIRNEARMDQNVDTRLSILEAQMTK

KGN65730.1 hypothetical protein Csa_019939 [Cucumis sativus]2.6e-6594.12Show/hide
Query:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT
        MGKGRVRGMKLGPTSTIVFKSTPRQFTE EIH+EAN+EDYQNVDARLSILELKMANM+SILEQNGFMQSNN TA HTNGDLPYCIYKNPGRVCSMRLQP 
Subjt:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT

Query:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK
        STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTK
Subjt:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK

TYJ97397.1 hypothetical protein E5676_scaffold194G002160 [Cucumis melo var. makuwa]1.2e-6292.65Show/hide
Query:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT
        MGKGRVRGMKLGPTSTIVFKSTPRQFTE EIH+E N+EDYQNVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGDLPYCIYKNPGRVCSMRLQP 
Subjt:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT

Query:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK
        STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTK
Subjt:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK

TrEMBL top hitse value%identityAlignment
A0A0A0LUW6 Uncharacterized protein1.3e-6594.12Show/hide
Query:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT
        MGKGRVRGMKLGPTSTIVFKSTPRQFTE EIH+EAN+EDYQNVDARLSILELKMANM+SILEQNGFMQSNN TA HTNGDLPYCIYKNPGRVCSMRLQP 
Subjt:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT

Query:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK
        STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTK
Subjt:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK

A0A5A7VKN2 Uncharacterized protein2.3e-6791.72Show/hide
Query:  VILLDYCGSMGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGR
        V+LLD CGSMGKGRVRGMKLGPTSTIVFKSTPRQFTE EIH+E N+EDYQNVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGDLPYCIYKNPGR
Subjt:  VILLDYCGSMGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGR

Query:  VCSMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK
        VCSMRLQP STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTK
Subjt:  VCSMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK

A0A5D3BE38 Uncharacterized protein5.9e-6392.65Show/hide
Query:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT
        MGKGRVRGMKLGPTSTIVFKSTPRQFTE EIH+E N+EDYQNVDARLSILELKMANM+SILEQNGFMQSNN T A+TNGDLPYCIYKNPGRVCSMRLQP 
Subjt:  MGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVCSMRLQPT

Query:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK
        STQVFRSISHRNIRNEARMDQNVDTRLSILE QMTK
Subjt:  STQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAAAGCTTCTCTGCGTAAAGTTAGTCATTCTCCTGGACTATTGTGGTTCTATGGGTAAAGGGCGTGTTCGTGGCATGAAGTTAGGACCGACCTCCACCATAGTGTTCAA
GTCTACACCACGTCAATTTACTGAGATTGAGATTCATAATGAGGCCAATATGGAAGATTACCAAAATGTCGATGCTAGACTTTCGATATTAGAGTTGAAAATGGCTAATA
TGCTCTCAATCTTGGAACAAAATGGTTTCATGCAATCCAACAATCTGACTGCTGCACATACAAATGGTGATTTGCCATACTGTATATACAAGAATCCTGGACGTGTTTGT
AGCATGAGATTACAACCTACTTCGACTCAAGTGTTCCGATCTATCTCACATCGGAATATTCGTAACGAGGCTCGTATGGATCAAAATGTAGATACTAGACTTTCGATATT
AGAGGCTCAAATGACCAAGTTTCAATTTTACGACGAAATGGTCTCATGCAAGGCAACATATGAGCAGGACCAACCACAAAAGTTTCAAGACAGGAACGAGGAGTTAACAC
ACTAA
mRNA sequenceShow/hide mRNA sequence
ATAAAGCTTCTCTGCGTAAAGTTAGTCATTCTCCTGGACTATTGTGGTTCTATGGGTAAAGGGCGTGTTCGTGGCATGAAGTTAGGACCGACCTCCACCATAGTGTTCAA
GTCTACACCACGTCAATTTACTGAGATTGAGATTCATAATGAGGCCAATATGGAAGATTACCAAAATGTCGATGCTAGACTTTCGATATTAGAGTTGAAAATGGCTAATA
TGCTCTCAATCTTGGAACAAAATGGTTTCATGCAATCCAACAATCTGACTGCTGCACATACAAATGGTGATTTGCCATACTGTATATACAAGAATCCTGGACGTGTTTGT
AGCATGAGATTACAACCTACTTCGACTCAAGTGTTCCGATCTATCTCACATCGGAATATTCGTAACGAGGCTCGTATGGATCAAAATGTAGATACTAGACTTTCGATATT
AGAGGCTCAAATGACCAAGTTTCAATTTTACGACGAAATGGTCTCATGCAAGGCAACATATGAGCAGGACCAACCACAAAAGTTTCAAGACAGGAACGAGGAGTTAACAC
ACTAATGATGCTCAAGTTCGTGAAGTCAAACTCAGCATCTTTCATAATATTTTAGTCGTCTGTAATGATAAAAACAATTTGATTTCCTAACTTTAGGGTTAAATATTGTT
ATTTTGTTTAGTTTATTTTTTTTGGGATGATATCAAGTATGTACTAGAGTATTCTTCTATTTTCAACCTTTCTTGTGTTGAAATCTCATTGATGGTAGTATTAGTGTGCA
GATGTTTATGTATAGATATGCATTAACAAAATTTCTTGTGCTTTTAATATTTCAATTATGTTC
Protein sequenceShow/hide protein sequence
IKLLCVKLVILLDYCGSMGKGRVRGMKLGPTSTIVFKSTPRQFTEIEIHNEANMEDYQNVDARLSILELKMANMLSILEQNGFMQSNNLTAAHTNGDLPYCIYKNPGRVC
SMRLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSILEAQMTKFQFYDEMVSCKATYEQDQPQKFQDRNEELTH