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Lsi02G013860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionZinc finger, C3HC4 type family protein
Genome locationchr02:18937278..18939035
RNA-Seq ExpressionLsi02G013860
SyntenyLsi02G013860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607218.1 hypothetical protein SDJN03_00560, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3594.05Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVFVGVVVFEQRKS+YRSISENYP ATQSPM K VLAKKYGPE SHLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_004152895.1 uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]1.7e-3592.86Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGSVF GVVVFEQRKSLY+SISENYP ATQSPM KPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_008457526.1 PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo]1.1e-3490.48Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGS F GVVVFEQRKSLY+SISENYP ATQSPM KPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_022156577.1 uncharacterized protein LOC111023455 [Momordica charantia]1.1e-3491.67Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVF GVVVFEQRKSLYRSISENYP A QSPM KPV+AKKYGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_023519919.1 uncharacterized protein LOC111783242 [Cucurbita pepo subsp. pepo]1.4e-3491.67Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVF GVVVFEQRKSLY SIS+NYP  TQSPM KPVLAKKYGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
TrEMBL top hitse value%identityAlignment
A0A0A0LXB2 Uncharacterized protein8.2e-3692.86Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGSVF GVVVFEQRKSLY+SISENYP ATQSPM KPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A1S3C5P6 uncharacterized protein LOC103497197 isoform X25.3e-3590.48Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGS F GVVVFEQRKSLY+SISENYP ATQSPM KPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A5D3BR76 Uncharacterized protein5.3e-3590.48Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGS F GVVVFEQRKSLY+SISENYP ATQSPM KPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A6J1DSC3 uncharacterized protein LOC1110234555.3e-3591.67Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVF GVVVFEQRKSLYRSISENYP A QSPM KPV+AKKYGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A6J1HZ79 uncharacterized protein LOC1114694461.2e-3491.67Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLGAALGSVF GVVVFEQRKSLY SIS+NYP  TQSPM KPVLAKKYGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28430.1 unknown protein3.1e-1956.47Show/hide
Query:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISE-NYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISILAQERLLG  LGS   G +VFEQRK ++ S+S+    S  Q+ +S  +  KKY  EF+ LWN+AVDQTF P I+ LSSR W
Subjt:  MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISE-NYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCATTCTCGCTCAGGAGCGACTGCTTGGTGCTGCATTGGGGAGCGTGTTCGTCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCGGTCCATTTCCGA
AAACTATCCATCAGCCACCCAATCTCCGATGAGTAAACCTGTACTAGCAAAGAAATATGGCCCAGAGTTTTCGCACCTATGGAATAGAGCTGTAGACCAGACATTTGGAC
CCGTGATTCAGGCTCTCAGTTCACGGGGATGGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAGTTGTTTGCATCCCCGCTAGCACCGAAGTTCTCTCTTTTCTTCAGCCCTATCGTGGCCGCCTCCCTCGATAATCTGTCCCCAATAAACCCTCTTTATTTCTCTCTC
CGACGGAAAACAAGCCGTGAAGCTTATGTCACCATGATTTCCATTCTCGCTCAGGAGCGACTGCTTGGTGCTGCATTGGGGAGCGTGTTCGTCGGGGTTGTTGTTTTTGA
GCAACGGAAAAGCTTATACCGGTCCATTTCCGAAAACTATCCATCAGCCACCCAATCTCCGATGAGTAAACCTGTACTAGCAAAGAAATATGGCCCAGAGTTTTCGCACC
TATGGAATAGAGCTGTAGACCAGACATTTGGACCCGTGATTCAGGCTCTCAGTTCACGGGGATGGTGATAGATCGAGAGTGGTTTCTTCATCAATGTATTTAACATCAAT
TCATGAAACATGTAAGGAAACAGAATTTTAAATTTTCTAGTTTTAACATTCTGGATTATCAAAGAATTGATGTTATGACTGTGGATCAAAACTTCAAAGCCACGAGTATA
AAGGTCTTTAAAACAATAAAATCTTTTCTTTTAGAAATCTGTACTTCCTTTTTTCCCATATATATTTCAGTGAGAAGTCATGTGTTTAAATTGTTAACATAGTATTGTGA
GGGAGATTAGTAGTGGAATATTTAGTTAGTAGCTCCTTATATGAACACAAATGAGA
Protein sequenceShow/hide protein sequence
MISILAQERLLGAALGSVFVGVVVFEQRKSLYRSISENYPSATQSPMSKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW