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Lsi02G013930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc finger protein ZAT12-like
Genome locationchr02:19143853..19144263
RNA-Seq ExpressionLsi02G013930
SyntenyLsi02G013930
Gene Ontology termsGO:0005516 - calmodulin binding (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66032.2 hypothetical protein Csa_019777 [Cucumis sativus]1.7e-5379.85Show/hide
Query:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRT-TVVAAV
        MV+C   +SKVEEPW+ NS+ A DS KVFVCKTCNREFSSFQALGGHRASHKKPN K   DPP KPKAHECPICGL FPIGQALGGHMRRHRT T    V
Subjt:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRT-TVVAAV

Query:  EKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVD
        EKSD  GK+GFGLDLNLTPIENNLKL+LTTPF+D
Subjt:  EKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVD

XP_008457541.1 PREDICTED: zinc finger protein ZAT12-like [Cucumis melo]1.1e-5779.71Show/hide
Query:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR---TTVVA
        MV+C   LSKVEEPW+KN++ AADS KVFVCKTCNREFSSFQALGGHRASHKKPNFKD N PP KPKAH+CPICGL FP+GQALGGHMRRHR   TT  A
Subjt:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR---TTVVA

Query:  AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCF
         +EKSDG  K+GFGLDLNLTPIENNLKL+L+TPFV+CF
Subjt:  AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCF

XP_022949001.1 zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata]2.0e-4674.05Show/hide
Query:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA
        MV+CL+LLSK+EEP +KN    + AADS K+FVCKTCNREFSSFQALGGHR SH KPNF + N PP K KAHECPICGLDFPIGQALGGHMRRHR T  A
Subjt:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA

Query:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL
        AV +KSDG GK+ F LDLNL P+ENNL L+L
Subjt:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL

XP_022997819.1 zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima]2.0e-4674.81Show/hide
Query:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA
        MV+CL+LLSK+EEP +KN    + AADS KVFVCKTCNREFSSFQALGGHR SH KPNF + N PP K KAHECPICGLDFPIGQALGGHMRRHR T  A
Subjt:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA

Query:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL
        AV +KSDG GK+ F LDLNL P+ENNL L+L
Subjt:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL

XP_038895358.1 zinc finger protein ZAT12-like [Benincasa hispida]3.4e-6284.06Show/hide
Query:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRT--TVVAA
        MV+CL+LLSKVEEPW+K+S+ AADS K FVCKTCNREFSSFQALGGHRASHKKPNFKD N P  KPKAHECPICGL FP+GQALGGHMRRHRT  T  A 
Subjt:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRT--TVVAA

Query:  VEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCFN
        VEKSDG GK+GFGLDLNLTPIENNLKL+LTTPFVDCFN
Subjt:  VEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCFN

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ6 Uncharacterized protein2.6e-5580.15Show/hide
Query:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRT-TVVAAV
        MV+C   +SKVEEPW+ NS+ A DS KVFVCKTCNREFSSFQALGGHRASHKKPN K   DPP KPKAHECPICGL FPIGQALGGHMRRHRT T    V
Subjt:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRT-TVVAAV

Query:  EKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCF
        EKSD  GK+GFGLDLNLTPIENNLKL+LTTPFV+CF
Subjt:  EKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCF

A0A1S3C722 zinc finger protein ZAT12-like5.6e-5879.71Show/hide
Query:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR---TTVVA
        MV+C   LSKVEEPW+KN++ AADS KVFVCKTCNREFSSFQALGGHRASHKKPNFKD N PP KPKAH+CPICGL FP+GQALGGHMRRHR   TT  A
Subjt:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR---TTVVA

Query:  AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCF
         +EKSDG  K+GFGLDLNLTPIENNLKL+L+TPFV+CF
Subjt:  AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFVDCF

A0A6J1DVW1 zinc finger protein ZAT12-like6.2e-4159.01Show/hide
Query:  MVECLILLSKV----------EEPWQKNSSSAADSS---KVFVCKTCNREFSSFQALGGHRASHKKPNFKDVND---------PPIKPKAHECPICGLDF
        MV+ L+LLS+V          EEP +KNSS AA  S   KV +CKTC REF SFQALGGHRASH K  F DVN          PP K   H+CP+CGL F
Subjt:  MVECLILLSKV----------EEPWQKNSSSAADSS---KVFVCKTCNREFSSFQALGGHRASHKKPNFKDVND---------PPIKPKAHECPICGLDF

Query:  PIGQALGGHMRRHRTTVVAA--VEKSDGYGKKGFGLDLNLTPIE-NNLKLRLTTPFVDCFN
        PIGQALGGHMRRHR+T  AA  ++KSDG   + FG+DLNL P++ NNLKL+L TPFVDCFN
Subjt:  PIGQALGGHMRRHRTTVVAA--VEKSDGYGKKGFGLDLNLTPIE-NNLKLRLTTPFVDCFN

A0A6J1GAS1 zinc finger protein ZAT12-like isoform X19.8e-4774.05Show/hide
Query:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA
        MV+CL+LLSK+EEP +KN    + AADS K+FVCKTCNREFSSFQALGGHR SH KPNF + N PP K KAHECPICGLDFPIGQALGGHMRRHR T  A
Subjt:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA

Query:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL
        AV +KSDG GK+ F LDLNL P+ENNL L+L
Subjt:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL

A0A6J1KCM4 zinc finger protein ZAT12-like isoform X19.8e-4774.81Show/hide
Query:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA
        MV+CL+LLSK+EEP +KN    + AADS KVFVCKTCNREFSSFQALGGHR SH KPNF + N PP K KAHECPICGLDFPIGQALGGHMRRHR T  A
Subjt:  MVECLILLSKVEEPWQKNS---SSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVA

Query:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL
        AV +KSDG GK+ F LDLNL P+ENNL L+L
Subjt:  AV-EKSDGYGKKGFGLDLNLTPIENNLKLRL

SwissProt top hitse value%identityAlignment
Q42410 Zinc finger protein ZAT122.1e-2545.83Show/hide
Query:  CLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVND---PPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVAA--
        CL+LLS+V +     +    D  +VF CKTC ++F SFQALGGHRASHKKPN   ++      +K  +H CPICG++FP+GQALGGHMRRHR    AA  
Subjt:  CLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVND---PPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVAA--

Query:  --------------VEKSDGYGKKGFGLDLNLTPIEN-NLKLRL
                        K    GK+   LDL+L  ++N NLKL L
Subjt:  --------------VEKSDGYGKKGFGLDLNLTPIEN-NLKLRL

Q42453 Zinc finger protein ZAT76.2e-2244.97Show/hide
Query:  ECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKK------PNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR----
        +CL+LLS+V E             +VF CKTC +EFSSFQALGGHRASHKK      P+            +H CPICG+ FP+GQALGGHMRRHR    
Subjt:  ECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKK------PNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR----

Query:  ------------TTVVAAVEKSDGYGKKGFGLDLNLTPIEN--NLKLRL
                    TT V A++K    GK+   LDL+L  +E+  N KL L
Subjt:  ------------TTVVAAVEKSDGYGKKGFGLDLNLTPIEN--NLKLRL

Q9LFG0 Zinc finger protein ZAT181.1e-2142.66Show/hide
Query:  MVECLILLSK----VEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNF----KDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR
        +VE L++LS+     +   ++++ S  + +  F CKTCNR+F SFQALGGHRASHKKP      + V     +   H+C IC   F  GQALGGHMR+HR
Subjt:  MVECLILLSK----VEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNF----KDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR

Query:  TTVVA--AVEKSDGYGKKGFG--------LDLNLTPIENNLKL
        T+++   ++  S  Y +  F         LDLNLTP+EN+L L
Subjt:  TTVVA--AVEKSDGYGKKGFG--------LDLNLTPIENNLKL

Q9LX85 Zinc finger protein ZAT81.1e-2144.74Show/hide
Query:  ECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPI-------KPK---AHECPICGLDFPIGQALGGHMRRHR
        +CL+LLS+V E             +VF CKTC +EFSSFQALGGHRASHKK    + +DP +       K K   +H CPICG++FP+GQALGGHMRRHR
Subjt:  ECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPI-------KPK---AHECPICGLDFPIGQALGGHMRRHR

Query:  -----------------TTVVAAVEKSDGYGKKGFGLDLNLTPIENNLKLRL
                         TT V  ++KS   GK+   LDL+      N KL L
Subjt:  -----------------TTVVAAVEKSDGYGKKGFGLDLNLTPIENNLKLRL

Q9SLD4 Zinc finger protein ZAT111.9e-2343.14Show/hide
Query:  MVECLILLSKVEEPWQ--KNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNF----KDVNDPPIKPKA---HECPICGLDFPIGQALGGHMRRH
        + +CL++L++     Q   N  + + +S  F CKTCN+ FSSFQALGGHRASHKKP      KDV       K    H+C IC   F  GQALGGHMRRH
Subjt:  MVECLILLSKVEEPWQ--KNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNF----KDVNDPPIKPKA---HECPICGLDFPIGQALGGHMRRH

Query:  RTTVVA------------AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFV
        R+++               V K  G  K+   LDLNLTP+EN+L+      FV
Subjt:  RTTVVA------------AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFV

Arabidopsis top hitse value%identityAlignment
AT2G28710.1 C2H2-type zinc finger family protein2.2e-3049.32Show/hide
Query:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPP----IKPKAHECPICGLDFPIGQALGGHMRRHR----
        M  CLILLSK  +   K        S+VF CKTCN+EF SFQALGGHRASH++    + + PP    +KP  HECPICG +F +GQALGGHMR+HR    
Subjt:  MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPP----IKPKAHECPICGLDFPIGQALGGHMRRHR----

Query:  ----------TTVVAAVEKSDGYGKKGFGLDLNLTPIEN-NLKLRL
                  T  V   +   G GK+   LDLNLTP+EN +LKL L
Subjt:  ----------TTVVAAVEKSDGYGKKGFGLDLNLTPIEN-NLKLRL

AT2G37430.1 C2H2 and C2HC zinc fingers superfamily protein1.4e-2443.14Show/hide
Query:  MVECLILLSKVEEPWQ--KNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNF----KDVNDPPIKPKA---HECPICGLDFPIGQALGGHMRRH
        + +CL++L++     Q   N  + + +S  F CKTCN+ FSSFQALGGHRASHKKP      KDV       K    H+C IC   F  GQALGGHMRRH
Subjt:  MVECLILLSKVEEPWQ--KNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNF----KDVNDPPIKPKA---HECPICGLDFPIGQALGGHMRRH

Query:  RTTVVA------------AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFV
        R+++               V K  G  K+   LDLNLTP+EN+L+      FV
Subjt:  RTTVVA------------AVEKSDGYGKKGFGLDLNLTPIENNLKLRLTTPFV

AT3G46070.1 C2H2-type zinc finger family protein1.5e-2342.21Show/hide
Query:  CLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPK----------AHECPICGLDFPIGQALGGHMRRHR-
        CL+LLS + E             +VF CKTC R+F SFQALGGHRASH K    D    P  PK          AH CPICGL+FP+GQALGGHMR+HR 
Subjt:  CLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPK----------AHECPICGLDFPIGQALGGHMRRHR-

Query:  -------------------TTVVAAVEKSDGYGKKGFGLDLNLTPIENNLKLRL
                           TT V  ++KS   GK+   LD +LT +E+ +   L
Subjt:  -------------------TTVVAAVEKSDGYGKKGFGLDLNLTPIENNLKLRL

AT3G46090.1 C2H2 and C2HC zinc fingers superfamily protein4.4e-2344.97Show/hide
Query:  ECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKK------PNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR----
        +CL+LLS+V E             +VF CKTC +EFSSFQALGGHRASHKK      P+            +H CPICG+ FP+GQALGGHMRRHR    
Subjt:  ECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKK------PNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHR----

Query:  ------------TTVVAAVEKSDGYGKKGFGLDLNLTPIEN--NLKLRL
                    TT V A++K    GK+   LDL+L  +E+  N KL L
Subjt:  ------------TTVVAAVEKSDGYGKKGFGLDLNLTPIEN--NLKLRL

AT5G59820.1 C2H2-type zinc finger family protein1.5e-2645.83Show/hide
Query:  CLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVND---PPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVAA--
        CL+LLS+V +     +    D  +VF CKTC ++F SFQALGGHRASHKKPN   ++      +K  +H CPICG++FP+GQALGGHMRRHR    AA  
Subjt:  CLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVND---PPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVAA--

Query:  --------------VEKSDGYGKKGFGLDLNLTPIEN-NLKLRL
                        K    GK+   LDL+L  ++N NLKL L
Subjt:  --------------VEKSDGYGKKGFGLDLNLTPIEN-NLKLRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAATGCTTAATATTGTTGTCCAAAGTGGAGGAGCCATGGCAGAAGAATAGTTCTTCCGCGGCGGATTCCAGCAAAGTTTTTGTATGCAAAACATGTAATCGTGA
ATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTTCAAAGACGTTAATGACCCACCAATCAAGCCCAAGGCTCATGAATGTCCAATTT
GTGGGCTTGATTTTCCGATTGGGCAAGCGTTGGGCGGCCACATGAGGCGCCATCGGACCACCGTCGTCGCCGCCGTGGAAAAATCTGATGGCTATGGGAAAAAGGGCTTT
GGGTTGGATTTGAACTTGACGCCAATAGAGAACAATTTGAAGTTGCGATTGACTACTCCTTTTGTAGATTGTTTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAATGCTTAATATTGTTGTCCAAAGTGGAGGAGCCATGGCAGAAGAATAGTTCTTCCGCGGCGGATTCCAGCAAAGTTTTTGTATGCAAAACATGTAATCGTGA
ATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTTCAAAGACGTTAATGACCCACCAATCAAGCCCAAGGCTCATGAATGTCCAATTT
GTGGGCTTGATTTTCCGATTGGGCAAGCGTTGGGCGGCCACATGAGGCGCCATCGGACCACCGTCGTCGCCGCCGTGGAAAAATCTGATGGCTATGGGAAAAAGGGCTTT
GGGTTGGATTTGAACTTGACGCCAATAGAGAACAATTTGAAGTTGCGATTGACTACTCCTTTTGTAGATTGTTTTAATTAA
Protein sequenceShow/hide protein sequence
MVECLILLSKVEEPWQKNSSSAADSSKVFVCKTCNREFSSFQALGGHRASHKKPNFKDVNDPPIKPKAHECPICGLDFPIGQALGGHMRRHRTTVVAAVEKSDGYGKKGF
GLDLNLTPIENNLKLRLTTPFVDCFN