; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G013990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G013990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHistone H4
Genome locationchr02:19241937..19243951
RNA-Seq ExpressionLsi02G013990
SyntenyLsi02G013990
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033918.1 uncharacterized protein E6C27_scaffold43059G001090 [Cucumis melo var. makuwa]7.0e-17100Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
XP_004149041.1 uncharacterized protein LOC101221721 isoform X1 [Cucumis sativus]7.0e-17100Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
XP_008457546.1 PREDICTED: uncharacterized protein LOC103497213 isoform X1 [Cucumis melo]7.0e-17100Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
XP_022156165.1 uncharacterized protein LOC111023120 [Momordica charantia]1.0e-1594.44Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSR LTPRSSAYLSALSQ+IEKKLQRALASSSQRRDVLQELFAD+ALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
XP_022964651.1 uncharacterized protein LOC111464663 isoform X3 [Cucurbita moschata]1.3e-1596.3Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSR LTPRSSAYLSALS QIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
TrEMBL top hitse value%identityAlignment
A0A0A0M0B8 Uncharacterized protein3.4e-17100Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
A0A1S3C727 uncharacterized protein LOC103497213 isoform X13.4e-17100Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
A0A5A7STG6 Uncharacterized protein3.4e-17100Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
A0A6J1DPI7 uncharacterized protein LOC1110231204.9e-1694.44Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSR LTPRSSAYLSALSQ+IEKKLQRALASSSQRRDVLQELFAD+ALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
A0A6J1HIB4 uncharacterized protein LOC111464663 isoform X16.4e-1696.3Show/hide
Query:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        MSR LTPRSSAYLSALS QIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
Subjt:  MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59960.1 unknown protein1.4e-1070.21Show/hide
Query:  RSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK
        R SAYL AL+Q+I+KKL RA+ S +Q R++LQ+LFADIALEVDDRAK
Subjt:  RSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCGGGCGTTGACGCCTCGGAGCTCTGCTTATCTTAGCGCTTTGTCCCAACAGATTGAAAAGAAGCTTCAGCGGGCATTAGCTTCTTCATCACAGAGGCGAGACGT
ACTGCAAGAATTGTTTGCTGACATAGCATTAGAAGTCGATGACCGAGCCAAAGGTGGGTTG
mRNA sequenceShow/hide mRNA sequence
TGCGGCACTAACCCAAATCGGTAACGCTTTATGCCCCCACGCTGTTGCCTCCATCGGGCGCCAAATCAACCACTCCTTTGCCTTTCTCTTCCTTTTCAATTTTCTTCTCC
AAAACATTTCTCTGCAACTCTCGATCTTCTCATGCATTCTCTTTCCATTTCTTCTTCTTCTTTCTTGTTTCTCCACCCTCACTCTTCCTCCACAACCTCACTATTCTTCT
TCTTTCTTTACCGCTGCTCCGATTGATCCAGATTAGGGCTACGCTTCTCTATCATCACAATGTCGCGGGCGTTGACGCCTCGGAGCTCTGCTTATCTTAGCGCTTTGTCC
CAACAGATTGAAAAGAAGCTTCAGCGGGCATTAGCTTCTTCATCACAGAGGCGAGACGTACTGCAAGAATTGTTTGCTGACATAGCATTAGAAGTCGATGACCGAGCCAA
AGGTGGGTTG
Protein sequenceShow/hide protein sequence
MSRALTPRSSAYLSALSQQIEKKLQRALASSSQRRDVLQELFADIALEVDDRAKGGL