CuGenDBv2

Gene ID	Lsi02G014800
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Defective in cullin neddylation protein
Genome location	chr02:20541185..20544700
RNA-Seq Expression	Lsi02G014800
Synteny	Lsi02G014800
Gene Ontology terms	GO:0045116 - protein neddylation (biological process) GO:0051443 - positive regulation of ubiquitin-protein transferase activity (biological process) GO:0000151 - ubiquitin ligase complex (cellular component) GO:0031624 - ubiquitin conjugating enzyme binding (molecular function) GO:0032182 - ubiquitin-like protein binding (molecular function) GO:0097602 - cullin family protein binding (molecular function)
InterPro domains	IPR014764 - Defective-in-cullin neddylation protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148700.1 uncharacterized protein LOC101214663 [Cucumis sativus]

8.1e-112

74.43

Show/hide

Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ
        + DIRSQNG+ HGNEDSG+ ETQM KSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLN MVDFSEFSRFYEFVFFVCRENGQKNI V  +  A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  + ++L     +   +     +GAWPVLIDDFVEHMYRRSGSNKVSKL CNCGDSE +SGVFEDSLSGLKFFPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRKLPEDMQMDGIVS SDPRT +ME +PVTS+KKSRFMACRPVNLEIN PS T  ENIEMVR    VGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASFT
        KASFT
Subjt:  KASFT

XP_008459316.1 PREDICTED: LOW QUALITY PROTEIN: defective in cullin neddylation protein 1 [Cucumis melo]

1.0e-114

74.75

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Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ
        + DIRSQNG+ HGNEDSG+ ETQM+KSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLN MVDFSEFSRFYEF FFVCRENGQKNI V  +  A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  + ++L     +   +     +GAWPVLIDDFVEHMYRRSGSNKVSKLCC CGDSES+SGVFEDSLSGLKFFPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRKLPEDMQMDGIVS SDPRTG+ME +PVTS+KKSRFMACRPVNLEINLPS T  ENIE+VR    VGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASFT
        KASFT
Subjt:  KASFT

XP_023550121.1 DCN1-like protein 1 [Cucurbita pepo subsp. pepo]

3.9e-106

69.51

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Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ
        + DIRSQNG  HGNEDSGHVE+Q+AKSSKQALAEL +YV+SSLQMGNS+V EL+K+MS+ NLMVDFSEFSRFYEFVFFV RENGQKNI V     A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  +L++L     +   +     +GAWPVLIDDFVEHMYRRSGSNK+SKL C CGDSESQSGVFEDSL GLK FPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRKLPEDMQ+DGI+SLSDPRTGSMEL PVTS+KKSRFM CRPVNLE+NLPS T D N +MVR   AVG K+PCA+EGCLSKGFAGLFST   LGLDQER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASFT
        KASFT
Subjt:  KASFT

XP_038890437.1 uncharacterized protein LOC120080000 isoform X1 [Benincasa hispida]

4.0e-119

76.39

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Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ
        + DIRSQNGFCHGNE+SG VETQMAKS KQALAELLIYVQSSLQMGNS+VYELSKLMSYLN MVDFSEFSRFYEFVFFVCRENGQKNI V  +  A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
         +  F+                IS+  + ++L     +   +     +GAWPVLIDDFVEHMYR+SGSNKVSK CCNCGDSESQSGVFEDSLSGLKFFPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRKLPEDMQMDGI+S SDPRTGSMELSPV S+KKSRFMACRPVNLEINLPS T DEN EMVR   AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASFT
        KASFT
Subjt:  KASFT

XP_038890438.1 uncharacterized protein LOC120080000 isoform X2 [Benincasa hispida]

3.4e-118

76.57

Show/hide

Query:  DIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQGS
        +IRSQNGFCHGNE+SG VETQMAKS KQALAELLIYVQSSLQMGNS+VYELSKLMSYLN MVDFSEFSRFYEFVFFVCRENGQKNI V  +  A  L  +
Subjt:  DIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQGS

Query:  DVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPGLK
          F+                IS+  + ++L     +   +     +GAWPVLIDDFVEHMYR+SGSNKVSK CCNCGDSESQSGVFEDSLSGLKFFPGLK
Subjt:  DVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPGLK

Query:  RKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQERKA
        RKLPEDMQMDGI+S SDPRTGSMELSPV S+KKSRFMACRPVNLEINLPS T DEN EMVR   AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQERKA
Subjt:  RKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQERKA

Query:  SFT
        SFT
Subjt:  SFT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KU82 Defective in cullin neddylation protein

3.9e-112

74.43

Show/hide

Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ
        + DIRSQNG+ HGNEDSG+ ETQM KSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLN MVDFSEFSRFYEFVFFVCRENGQKNI V  +  A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  + ++L     +   +     +GAWPVLIDDFVEHMYRRSGSNKVSKL CNCGDSE +SGVFEDSLSGLKFFPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRKLPEDMQMDGIVS SDPRT +ME +PVTS+KKSRFMACRPVNLEIN PS T  ENIEMVR    VGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASFT
        KASFT
Subjt:  KASFT

A0A1S3CB35 Defective in cullin neddylation protein

5.0e-115

74.75

Show/hide

Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ
        + DIRSQNG+ HGNEDSG+ ETQM+KSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLN MVDFSEFSRFYEF FFVCRENGQKNI V  +  A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS--ATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  + ++L     +   +     +GAWPVLIDDFVEHMYRRSGSNKVSKLCC CGDSES+SGVFEDSLSGLKFFPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRKLPEDMQMDGIVS SDPRTG+ME +PVTS+KKSRFMACRPVNLEINLPS T  ENIE+VR    VGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASFT
        KASFT
Subjt:  KASFT

A0A6J1BYJ7 Defective in cullin neddylation protein

1.1e-101

69.61

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Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ
        + DIRSQNGFC GNEDS HVETQ+AKSSK+ALA LL YVQSSLQMGNS+VYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNI V     A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  + ++L     +   +     +GAWPVLIDDFVEHMYRR  SN +S L CNCGD+ESQS  FEDSL GLKFFPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVRAVG----SKSPCAVEGCLSKGFAGLFSTRLFLGLDQE
        LKRKLPEDMQMDG+VSL D RTG MELSPVTSIKKSR MA +PVNLEINLP+ T DE++EMVR  G    +KSPCAVEGCLSKGFAGLFSTR FL LDQE
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVRAVG----SKSPCAVEGCLSKGFAGLFSTRLFLGLDQE

Query:  RKASFT
        RKASFT
Subjt:  RKASFT

A0A6J1FFS5 Defective in cullin neddylation protein

1.6e-105

69.41

Show/hide

Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ
        + DIRSQNG  HGNEDSGHVE+Q+AKSSKQALAEL +YV+SSLQMGNS+V EL+K+MS+ NLMVDFSEFSRFYEFVFFV RENGQKNI V     A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  +L++L     +   +     +GAWPVLIDDFVEHMYRRSGSNK+SKL C CGDSESQSGVFEDSL GLK FPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRKLPEDMQ+D I+SLSDPRTGSMEL PVTS+KK+RFM CRPVNLE+NLPS T DENI+MVR   AVG KSPCA+EG LSKGFAGLFSTR  LGLD+ER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASF
        KASF
Subjt:  KASF

A0A6J1JZZ8 Defective in cullin neddylation protein

6.1e-105

68.85

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Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ
        + DIRSQNG  HGNED GHVE+Q+AKSSKQALAEL +YV+SSLQMGNS+V EL+K+MS+ NLMVDFSEFSRFYEFVFFV RENGQKNI V     A  L 
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIV--LYSATYLQ

Query:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG
            F+                IS+  +L++L     +   +     +GAWPVLIDDFVEHMYRRSGSNK+ KL C CGDSESQSGVFEDSL GLK FPG
Subjt:  GSDVFKF------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPG

Query:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER
        LKRK PEDMQ+D I+S SDPRTGSMEL PVTS+KKSRFM CRPVNLE+NLPS T DENI+MVR   AVG KSPCA+EGCLSKGFAGLFST   LGLDQER
Subjt:  LKRKLPEDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVR---AVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQER

Query:  KASFT
        KASFT
Subjt:  KASFT

SwissProt top hits

e value

%identity

Alignment

Q9MBG8 Defective in cullin neddylation protein AAR3

5.4e-34

35.45

Show/hide

Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYSATYLQGS
        F  IRS    C+     G  E+Q    SK+A+ +LL  V++  Q  NS+  EL KLMS L+LMVDF+EF+ FY+FVFF+CRENGQKNI +  + T  +  
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYSATYLQGS

Query:  DVFKF--------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDS---------
           +F                 IS+  + ++L     +   +     +GAWPVLIDDFVEHMY   G NK + L C CGD+ES+S ++++          
Subjt:  DVFKF--------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDS---------

Query:  LSGLKFFPGLKRKLP---EDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVRAVGSKSPCAVEGCLSKGFAGLFST
         +GL+  PGLKRK     ++ + D    + + +  S  L+    IK S    C                         SKSPC++E  LS+GFA L ST
Subjt:  LSGLKFFPGLKRKLP---EDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVRAVGSKSPCAVEGCLSKGFAGLFST

Arabidopsis top hits

e value

%identity

Alignment

AT3G28970.1 Domain of unknown function (DUF298)

3.9e-35

35.45

Show/hide

Query:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYSATYLQGS
        F  IRS    C+     G  E+Q    SK+A+ +LL  V++  Q  NS+  EL KLMS L+LMVDF+EF+ FY+FVFF+CRENGQKNI +  + T  +  
Subjt:  FVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYSATYLQGS

Query:  DVFKF--------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDS---------
           +F                 IS+  + ++L     +   +     +GAWPVLIDDFVEHMY   G NK + L C CGD+ES+S ++++          
Subjt:  DVFKF--------------HRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDS---------

Query:  LSGLKFFPGLKRKLP---EDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVRAVGSKSPCAVEGCLSKGFAGLFST
         +GL+  PGLKRK     ++ + D    + + +  S  L+    IK S    C                         SKSPC++E  LS+GFA L ST
Subjt:  LSGLKFFPGLKRKLP---EDMQMDGIVSLSDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVRAVGSKSPCAVEGCLSKGFAGLFST

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACTCCAGTCTGATGTGCATCGCGTTAGGAACTAAAACGGCTAACTTGTTTGTAGATATTCGATCTCAAAATGGCTTTTGTCATGGGAATGAAGACTCTGGACATGT
TGAAACACAAATGGCTAAAAGTTCAAAGCAGGCACTTGCAGAGCTCTTAATATATGTGCAATCATCACTGCAGATGGGGAACTCGGTTGTATATGAGCTATCGAAGCTGA
TGTCATATCTAAATTTAATGGTAGACTTTTCAGAATTTTCACGCTTCTACGAGTTTGTTTTCTTTGTGTGTCGGGAGAATGGTCAAAAGAATATCATAGTGCTATATAGT
GCCACTTATCTCCAAGGATCTGATGTATTTAAGTTCCACAGAACAATCAGCGACACAATATTTCTGAGGATACTTGGCAGCAAGTCTTGGCTTTCAGCCGCTGTGTACAT
GAAAATCTGGAAGGGTGCTTGGCCTGTTCTAATTGATGACTTCGTTGAGCACATGTACAGGCGGTCAGGGTCTAATAAAGTCTCAAAGTTATGTTGTAATTGTGGAGACT
CAGAATCACAGTCAGGTGTATTTGAAGATTCTCTTTCTGGATTAAAGTTTTTCCCTGGTTTGAAGAGGAAATTACCTGAGGACATGCAAATGGACGGCATTGTGTCTCTG
AGTGATCCTAGAACCGGCTCCATGGAGTTAAGTCCTGTTACGAGCATCAAGAAAAGTAGATTCATGGCTTGCAGGCCAGTGAACTTGGAGATAAACTTACCATCATATAC
TGTAGATGAGAACATAGAAATGGTTCGTGCGGTAGGTTCCAAATCTCCATGTGCTGTTGAAGGTTGTCTGTCAAAAGGTTTTGCTGGGCTTTTCTCGACTCGTTTGTTCT
TAGGATTGGACCAAGAAAGGAAAGCGTCATTCACGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNSSLMCIALGTKTANLFVDIRSQNGFCHGNEDSGHVETQMAKSSKQALAELLIYVQSSLQMGNSVVYELSKLMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIIVLYS
ATYLQGSDVFKFHRTISDTIFLRILGSKSWLSAAVYMKIWKGAWPVLIDDFVEHMYRRSGSNKVSKLCCNCGDSESQSGVFEDSLSGLKFFPGLKRKLPEDMQMDGIVSL
SDPRTGSMELSPVTSIKKSRFMACRPVNLEINLPSYTVDENIEMVRAVGSKSPCAVEGCLSKGFAGLFSTRLFLGLDQERKASFT

Lsi02G014800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome