; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G014850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G014850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmini zinc finger protein 2
Genome locationchr02:20598316..20598606
RNA-Seq ExpressionLsi02G014850
SyntenyLsi02G014850
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148693.1 mini zinc finger protein 2 [Cucumis sativus]1.6e-4295.65Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSP
        MRKRQVVLRRSEE SR++VASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTA LTCAACGCHRNFHRRQVGTEVVCDCSSSP
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSP

XP_016902406.1 PREDICTED: mini zinc finger protein 2 [Cucumis melo]3.2e-4697.92Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRRSEEPSR+TVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTA LTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

XP_022134197.1 mini zinc finger protein 2-like [Momordica charantia]4.8e-4292.71Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRR EEPSR T ASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT+  LTCAACGCHRNFHRRQVGTEVVCDCSS PSNGT
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

XP_022939280.1 mini zinc finger protein 2-like [Cucurbita moschata]2.8e-4292.71Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRRSEEPSR+T ASSFTVRSVRYGECQKNHAA VGGYAVDGCREFMASGDEGTT+ALTCAACGCHR+FHRRQVGTEVV DCSSSPSN T
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

XP_038890678.1 mini zinc finger protein 2-like [Benincasa hispida]6.0e-4595.83Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRRSEEPSRET ASSFTVRS+RYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTE+V DCSSSPSNGT
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ7 Transcription factor7.9e-4395.65Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSP
        MRKRQVVLRRSEE SR++VASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTA LTCAACGCHRNFHRRQVGTEVVCDCSSSP
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSP

A0A1S4E2E9 mini zinc finger protein 21.5e-4697.92Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRRSEEPSR+TVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTA LTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

A0A5D3CUT9 Mini zinc finger protein 21.5e-4697.92Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRRSEEPSR+TVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTA LTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

A0A6J1BYZ4 mini zinc finger protein 2-like2.3e-4292.71Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRR EEPSR T ASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT+  LTCAACGCHRNFHRRQVGTEVVCDCSS PSNGT
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

A0A6J1FM92 mini zinc finger protein 2-like1.4e-4292.71Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT
        MRKRQVVLRRSEEPSR+T ASSFTVRSVRYGECQKNHAA VGGYAVDGCREFMASGDEGTT+ALTCAACGCHR+FHRRQVGTEVV DCSSSPSN T
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 11.4e-2372.86Show/hide
Query:  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQV-GTEVVCDCSSSPSNGT
        VRY ECQ+NHAA +GG+AVDGCREFMASG EGT AAL CAACGCHR+FHRR+V      CDCSS  S+GT
Subjt:  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQV-GTEVVCDCSSSPSNGT

Q2Q493 Mini zinc finger protein 32.1e-2462.77Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSN
        M+KRQVV+++ +     T +SS    +VRY ECQKNHAA +GGYAVDGCREFMASG +    ALTCAACGCHRNFHRR+V TEVVC+ S   +N
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSN

Q2RB28 Mini zinc finger protein 11.4e-2372.86Show/hide
Query:  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQV-GTEVVCDCSSSPSNGT
        VRY ECQ+NHAA +GG+AVDGCREFMASG EGT AAL CAACGCHR+FHRR+V      CDCSS  S+GT
Subjt:  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQV-GTEVVCDCSSSPSNGT

Q9CA51 Mini zinc finger protein 13.2e-2558.76Show/hide
Query:  MRKRQVVLRRSEEPSR--------ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCS
        M+KRQ+V+++    S          + +SS  + +VRY ECQKNHAA +GGYAVDGCREFMA+G EGT  AL CAACGCHRNFHR++V TEVVC+ S
Subjt:  MRKRQVVLRRSEEPSR--------ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCS

Q9LJW5 Mini zinc finger protein 28.2e-3779.8Show/hide
Query:  MRKRQVVLRRS--EEPSR-ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-GDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNG
        MRKRQVVLRR+  EEPSR  + ASS TVR+VRYGECQKNHAA VGGYAVDGCREFMAS G+EGT AALTCAACGCHR+FHRR++ TEVVCDC+S PS G
Subjt:  MRKRQVVLRRS--EEPSR-ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-GDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNG

Arabidopsis top hitse value%identityAlignment
AT1G18835.1 mini zinc finger1.5e-2562.77Show/hide
Query:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSN
        M+KRQVV+++ +     T +SS    +VRY ECQKNHAA +GGYAVDGCREFMASG +    ALTCAACGCHRNFHRR+V TEVVC+ S   +N
Subjt:  MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSN

AT1G74660.1 mini zinc finger 12.3e-2658.76Show/hide
Query:  MRKRQVVLRRSEEPSR--------ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCS
        M+KRQ+V+++    S          + +SS  + +VRY ECQKNHAA +GGYAVDGCREFMA+G EGT  AL CAACGCHRNFHR++V TEVVC+ S
Subjt:  MRKRQVVLRRSEEPSR--------ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCS

AT3G28917.1 mini zinc finger 25.8e-3879.8Show/hide
Query:  MRKRQVVLRRS--EEPSR-ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-GDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNG
        MRKRQVVLRR+  EEPSR  + ASS TVR+VRYGECQKNHAA VGGYAVDGCREFMAS G+EGT AALTCAACGCHR+FHRR++ TEVVCDC+S PS G
Subjt:  MRKRQVVLRRS--EEPSR-ETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-GDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNG

AT3G50890.1 homeobox protein 281.5e-1765.45Show/hide
Query:  RSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQV
        +  +Y ECQKNHAA  GG+ VDGC EFMA G+EGT  AL CAAC CHR+FHR++V
Subjt:  RSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQV

AT4G24660.1 homeobox protein 228.7e-1869.23Show/hide
Query:  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQ
        +RY EC KNHA  +GG+AVDGC EFM SG++GT  AL CAACGCHRNFHR++
Subjt:  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCGTCAAGTTGTGCTTAGAAGATCAGAAGAACCCTCAAGGGAGACTGTGGCTTCCTCTTTCACAGTAAGGAGTGTAAGATATGGGGAGTGCCAAAAGAACCA
CGCCGCCGGGGTCGGAGGGTACGCTGTTGACGGGTGTCGAGAATTCATGGCGAGTGGCGACGAAGGGACGACCGCTGCACTGACTTGCGCCGCCTGCGGTTGCCACCGGA
ATTTTCATAGAAGGCAAGTTGGAACTGAGGTAGTTTGTGATTGCTCTTCATCACCCTCAAATGGAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGCGTCAAGTTGTGCTTAGAAGATCAGAAGAACCCTCAAGGGAGACTGTGGCTTCCTCTTTCACAGTAAGGAGTGTAAGATATGGGGAGTGCCAAAAGAACCA
CGCCGCCGGGGTCGGAGGGTACGCTGTTGACGGGTGTCGAGAATTCATGGCGAGTGGCGACGAAGGGACGACCGCTGCACTGACTTGCGCCGCCTGCGGTTGCCACCGGA
ATTTTCATAGAAGGCAAGTTGGAACTGAGGTAGTTTGTGATTGCTCTTCATCACCCTCAAATGGAACTTAA
Protein sequenceShow/hide protein sequence
MRKRQVVLRRSEEPSRETVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHRRQVGTEVVCDCSSSPSNGT