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Lsi02G014870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G014870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFBD domain-containing protein
Genome locationchr02:20619500..20622546
RNA-Seq ExpressionLsi02G014870
SyntenyLsi02G014870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054394.1 RNI-like/FBD-like domain protein [Cucumis melo var. makuwa]2.5e-1180Show/hide
Query:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
        S++VSNCFDAYTT TW+KIVAP+LNTL WIYNALT E NIH+FTS
Subjt:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
XP_004140045.1 putative F-box/FBD/LRR-repeat protein At4g03220 [Cucumis sativus]2.5e-1180Show/hide
Query:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
        S++VSNCFDAYTT TW+KIVAP+LNTL WIYNALT E NIH+FTS
Subjt:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
XP_038901037.1 putative F-box/FBD/LRR-repeat protein At4g03220 [Benincasa hispida]8.1e-1071.11Show/hide
Query:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
        S+ VS+CFDAYTTPT +KIVAP+LNT++W+YNAL  E NIH FTS
Subjt:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
TrEMBL top hitse value%identityAlignment
A0A0A0KAF3 FBD domain-containing protein1.2e-1180Show/hide
Query:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
        S++VSNCFDAYTT TW+KIVAP+LNTL WIYNALT E NIH+FTS
Subjt:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
A0A5D3BAE4 RNI-like/FBD-like domain protein1.2e-1180Show/hide
Query:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
        S++VSNCFDAYTT TW+KIVAP+LNTL WIYNALT E NIH+FTS
Subjt:  SLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTS
A0A6J1B4R2 putative F-box/FBD/LRR-repeat protein At4g032209.4e-0440.58Show/hide
Query:  LQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTSLGFLNILLPSFTLFLLLSTISLARL
        L+V++CFDAY   +W+KI APSL  ++W YNA+T   ++ + TS+  ++I       FLL   +S+A+L
Subjt:  LQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTSLGFLNILLPSFTLFLLLSTISLARL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCCTAAACACAGCCTCCAAGTATCTAACTGTTTTGATGCCTACACTACTCCCACTTGGATTAAAATCGTTGCTCCCAGTCTCAATACTCTGCTTTGGATTTACAA
TGCCTTAACCTATGAAAACAATATTCACCATTTTACCTCTCTAGGTTTCCTCAACATTTTGTTACCAAGCTTCACTCTGTTTCTGCTCCTCTCCACAATTTCCCTTGCCC
GCTTAATAGTTTCTATGTTGATATGGGTTAGCGCAAACTATATTTCACTTCAGCCCATAATCTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATCCTAAACACAGCCTCCAAGTATCTAACTGTTTTGATGCCTACACTACTCCCACTTGGATTAAAATCGTTGCTCCCAGTCTCAATACTCTGCTTTGGATTTACAA
TGCCTTAACCTATGAAAACAATATTCACCATTTTACCTCTCTAGGTTTCCTCAACATTTTGTTACCAAGCTTCACTCTGTTTCTGCTCCTCTCCACAATTTCCCTTGCCC
GCTTAATAGTTTCTATGTTGATATGGGTTAGCGCAAACTATATTTCACTTCAGCCCATAATCTACTAG
Protein sequenceShow/hide protein sequence
MYPKHSLQVSNCFDAYTTPTWIKIVAPSLNTLLWIYNALTYENNIHHFTSLGFLNILLPSFTLFLLLSTISLARLIVSMLIWVSANYISLQPIIY