; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G014880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G014880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L34
Genome locationchr02:20622718..20625145
RNA-Seq ExpressionLsi02G014880
SyntenyLsi02G014880
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939767.1 60S ribosomal protein L34 [Cucurbita moschata]6.1e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_022993685.1 60S ribosomal protein L34 [Cucurbita maxima]8.0e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHR+VKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_023550590.1 60S ribosomal protein L34 [Cucurbita pepo subsp. pepo]8.0e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRT+NRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_027098139.1 60S ribosomal protein L34 [Coffea arabica]3.6e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]2.8e-5599.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

TrEMBL top hitse value%identityAlignment
A0A1S3BV34 60S ribosomal protein L343.9e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A5A7UWQ0 60S ribosomal protein L343.9e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1FHR3 60S ribosomal protein L343.0e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1JZ78 60S ribosomal protein L343.9e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHR+VKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6P6V549 60S ribosomal protein L341.7e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L346.4e-5592.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+R+RRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQK KEK AAK+
Subjt:  KIVKKVLKIQKAKEKLAAKS

P41098 60S ribosomal protein L346.8e-5796.67Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+R+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q42351 60S ribosomal protein L34-11.4e-5490.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+R+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q9FE65 60S ribosomal protein L34-27.1e-5491.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+R+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

Q9LJW6 60S ribosomal protein L34-36.0e-5390Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+ RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein1.0e-5590.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+R+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

AT1G26880.2 Ribosomal protein L34e superfamily protein2.6e-4390.22Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+R+RRTVNRAYGGVLSGSAVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERII

AT1G69620.1 ribosomal protein L345.0e-5591.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+R+RRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

AT3G28900.1 Ribosomal protein L34e superfamily protein4.2e-5490Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLAR+ RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCTACCAAATCCAATCAGCACCGTGTTGTCAAAACGCCCGGTGGAAAGTTGATCTATCAAACCACCAAAAA
GAGAGCCAGCGGCCCCAAATGTCCTGTTACTGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGATCTAGACTGGCTAGGCACCGCAGAACCG
TTAATCGGGCATATGGTGGTGTGTTGTCAGGAAGCGCTGTTAGAGAAAGGATTATTCGGGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAA
AAGGCAAAGGAAAAGTTAGCTGCCAAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
CGTACAACTGCCGTTGGATCTAGGGCTTCAAAAGCTTAAAACCTTACCTTATATATTGCGACTTCCTCCGCCAAATTGCAGCCCCTACTGCCGCGATATTTCTCAGAGAC
GCATAGAGCTCAACTCAAGGTCAATCGAAGATGGTGCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCTACCAAATCCAATCAGCACCGTGTTGTCAAAACGCCCGG
TGGAAAGTTGATCTATCAAACCACCAAAAAGAGAGCCAGCGGCCCCAAATGTCCTGTTACTGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGA
GATCTAGACTGGCTAGGCACCGCAGAACCGTTAATCGGGCATATGGTGGTGTGTTGTCAGGAAGCGCTGTTAGAGAAAGGATTATTCGGGCTTTTCTGGTAGAAGAGCAG
AAGATTGTGAAAAAGGTATTGAAAATCCAAAAGGCAAAGGAAAAGTTAGCTGCCAAGAGTTAAGATATGATTAGGCAAAAAGAAGGGGGAAAAAAGAAACGACAATTGAA
CTGCTCTGGTTTAGAAGTGTTTTGCGTTGAATTTAAGAATTTTAGTGTTGATAGTGAGTAGGTGTTTCTTCTTTTGCTTAATTGGATCACCACTTTTTCATTCTTCACTT
TGTTGACAAATCAATTCCCGAGGTCTTGTTTTGTGATATTCTGTATCTACTATGACAATGTTGGGATGTTATTTTTTAACTCCCTTTTTAAAGATTTTTGTATTATGCTG
CTGAATCTTATACGATCTATCTCGTGAATTGACATTAGAATAGAATTTCTCTGATTAAATGGAGTTTAGTTTATTGTTCTTAA
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARHRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQ
KAKEKLAAKS