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Lsi02G015100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:21011147..21011428
RNA-Seq ExpressionLsi02G015100
SyntenyLsi02G015100
Gene Ontology termsNA
InterPro domainsIPR031421 - Protein of unknown function DUF4666


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4275102.1 unnamed protein product [Prunus armeniaca]8.8e-0946.94Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLM-SQE----LNRPRAERNETSESG--LPNSSSPSTPQEAPQSCSLSAIFGRCMGSP
        M +L RSSISFRRQGSSGLIWE+ V+ L+ K  ++ T S +   SQE    L+    ER +       LP +S PS P++  + CS S +FGRCM SP
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLM-SQE----LNRPRAERNETSESG--LPNSSSPSTPQEAPQSCSLSAIFGRCMGSP

KAA0039541.1 hypothetical protein E6C27_scaffold64G003660 [Cucumis melo var. makuwa]1.4e-2273.12Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAER-NETSES-GLPNSSSPSTPQE-APQSCSLSAIFGRCMGS
        MT+LQRSSISFRRQGSSG IWE+NVR L+ KT  RATASAS+MSQELNR R ER +ET +S GL NSSS STP E  PQ CS S++FGRCMGS
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAER-NETSES-GLPNSSSPSTPQE-APQSCSLSAIFGRCMGS

KGN52429.1 hypothetical protein Csa_008360 [Cucumis sativus]1.4e-2268.75Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSESG----LPNSSSPSTPQE--APQSCSLSAIFGRCMGS
        MT+LQRSSISFRRQGSSGLIWE+NVRAL+AKTG RATAS S+MSQEL++   ER+ET +S     + +SSSPSTP E   PQ CS S++FGRCMGS
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSESG----LPNSSSPSTPQE--APQSCSLSAIFGRCMGS

PRQ57542.1 hypothetical protein RchiOBHm_Chr1g0349451 [Rosa chinensis]3.0e-0948.51Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTG-VRATASASLMSQELNR---PRAERNETSESGLPNSSSPSTP-----QEAPQSCSLSAIFGRCMGSP
        MTSL+RSS+SFRRQGSSG IWE+ ++ ++ K+G  +A  S    + E  R    R +     + G P+S S STP     Q+A Q C+LS+IFGRCMGSP
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTG-VRATASASLMSQELNR---PRAERNETSESGLPNSSSPSTP-----QEAPQSCSLSAIFGRCMGSP

Query:  T
        T
Subjt:  T

TQD82243.1 hypothetical protein C1H46_032215 [Malus baccata]3.3e-0842.11Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQE----LNRPRAERNETSESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSP
        MT+LQRS+ SFRRQGSSGLIWE+ ++ L+ K  ++   S +    E    L+    ER +      P+SS  S P++    CSL  +FGRCM  P
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQE----LNRPRAERNETSESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSP

TrEMBL top hitse value%identityAlignment
A0A0A0KU28 Uncharacterized protein6.8e-2368.75Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSESG----LPNSSSPSTPQE--APQSCSLSAIFGRCMGS
        MT+LQRSSISFRRQGSSGLIWE+NVRAL+AKTG RATAS S+MSQEL++   ER+ET +S     + +SSSPSTP E   PQ CS S++FGRCMGS
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSESG----LPNSSSPSTPQE--APQSCSLSAIFGRCMGS

A0A2N9EKT7 Uncharacterized protein2.9e-1045.74Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGV--RATASASLMSQELNRPRAERNETSESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSPT
        MT+LQRS++SFRRQGSSGLIW++ ++ L+ K GV   +  S +   ++ +    +R + + S  PN SS S P +  + CS SA+FGRC+GSPT
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGV--RATASASLMSQELNRPRAERNETSESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSPT

A0A2P6SFT9 Uncharacterized protein1.5e-0948.51Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTG-VRATASASLMSQELNR---PRAERNETSESGLPNSSSPSTP-----QEAPQSCSLSAIFGRCMGSP
        MTSL+RSS+SFRRQGSSG IWE+ ++ ++ K+G  +A  S    + E  R    R +     + G P+S S STP     Q+A Q C+LS+IFGRCMGSP
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTG-VRATASASLMSQELNR---PRAERNETSESGLPNSSSPSTP-----QEAPQSCSLSAIFGRCMGSP

Query:  T
        T
Subjt:  T

A0A5D3CWI8 Uncharacterized protein6.8e-2373.12Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAER-NETSES-GLPNSSSPSTPQE-APQSCSLSAIFGRCMGS
        MT+LQRSSISFRRQGSSG IWE+NVR L+ KT  RATASAS+MSQELNR R ER +ET +S GL NSSS STP E  PQ CS S++FGRCMGS
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAER-NETSES-GLPNSSSPSTPQE-APQSCSLSAIFGRCMGS

A0A6J5UGS2 Uncharacterized protein4.3e-0946.94Show/hide
Query:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLM-SQE----LNRPRAERNETSESG--LPNSSSPSTPQEAPQSCSLSAIFGRCMGSP
        M +L RSSISFRRQGSSGLIWE+ V+ L+ K  ++ T S +   SQE    L+    ER +       LP +S PS P++  + CS S +FGRCM SP
Subjt:  MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLM-SQE----LNRPRAERNETSESG--LPNSSSPSTPQEAPQSCSLSAIFGRCMGSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCATTGCAAAGATCATCAATCTCATTCCGGAGGCAAGGCTCGTCCGGCCTCATTTGGGAGGAGAATGTCCGAGCACTCAAAGCGAAAACTGGTGTTCGAGCCAC
GGCATCGGCATCTCTGATGAGTCAAGAATTGAACCGTCCGAGGGCGGAGAGAAATGAAACTTCGGAGTCTGGTTTGCCAAATTCATCATCTCCTTCAACTCCTCAAGAAG
CCCCTCAAAGCTGCTCTCTTTCTGCTATTTTTGGACGTTGTATGGGCTCTCCTACCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATCATTGCAAAGATCATCAATCTCATTCCGGAGGCAAGGCTCGTCCGGCCTCATTTGGGAGGAGAATGTCCGAGCACTCAAAGCGAAAACTGGTGTTCGAGCCAC
GGCATCGGCATCTCTGATGAGTCAAGAATTGAACCGTCCGAGGGCGGAGAGAAATGAAACTTCGGAGTCTGGTTTGCCAAATTCATCATCTCCTTCAACTCCTCAAGAAG
CCCCTCAAAGCTGCTCTCTTTCTGCTATTTTTGGACGTTGTATGGGCTCTCCTACCATTTAG
Protein sequenceShow/hide protein sequence
MTSLQRSSISFRRQGSSGLIWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSPTI