; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G015130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc-finger homeodomain protein 10-like
Genome locationchr02:21022402..21025248
RNA-Seq ExpressionLsi02G015130
SyntenyLsi02G015130
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578585.1 Zinc-finger homeodomain protein 9, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3166.99Show/hide
Query:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI
        P SS K LP TNG+LKRH+  H+ QP L+V YKECL+NHA  LGA  LD CG+FMPSP A+  D TSL C ACGCHR+FH RD +DPISTL INTA TH+
Subjt:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI

Query:  IEY
        IEY
Subjt:  IEY

KAG7016139.1 Zinc-finger homeodomain protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3166.99Show/hide
Query:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI
        P SS K LP TNG+LKRH+  H+ QP L+V YKECL+NHA  LGA  LD CG+FMPSP A+  D TSL C ACGCHR+FH RD +DPISTL INTA TH+
Subjt:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI

Query:  IEY
        IEY
Subjt:  IEY

XP_011655994.1 zinc-finger homeodomain protein 10 [Cucumis sativus]1.3e-3271.43Show/hide
Query:  TNGVLKRHHHT--HSHQPP---LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY
        TNGVLKRHHH   H H+PP   +VV YKECL+NHA  LGA  LD CG+FMPSP ATP+D TSL+C ACGCHR+FH RD +DPISTLAINTA TH+IEY
Subjt:  TNGVLKRHHHT--HSHQPP---LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY

XP_023550985.1 zinc-finger homeodomain protein 10-like [Cucurbita pepo subsp. pepo]3.5e-3368.93Show/hide
Query:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI
        P SS K LP TNG+LKRH+  H+HQP LVV YKECL+NHA  LGA  LD CG+FMPSP A+  D TSL C ACGCHR+FH RD +DPISTL INTA TH+
Subjt:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI

Query:  IEY
        IEY
Subjt:  IEY

XP_038891176.1 zinc-finger homeodomain protein 10-like [Benincasa hispida]1.3e-3572.82Show/hide
Query:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI
        P SS+K LP TNGVLKRHHH    QP + V YKECL+NHA  LGA  LD CG+FMPSP ATPTD TSLKC ACGCHR+FH RD +DPISTLAINTA TH+
Subjt:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI

Query:  IEY
        IEY
Subjt:  IEY

TrEMBL top hitse value%identityAlignment
A0A0A0KSA4 ZF-HD dimerization-type domain-containing protein6.4e-3371.43Show/hide
Query:  TNGVLKRHHHT--HSHQPP---LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY
        TNGVLKRHHH   H H+PP   +VV YKECL+NHA  LGA  LD CG+FMPSP ATP+D TSL+C ACGCHR+FH RD +DPISTLAINTA TH+IEY
Subjt:  TNGVLKRHHHT--HSHQPP---LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY

A0A1S3CST8 zinc-finger homeodomain protein 10-like9.3e-3266.04Show/hide
Query:  TNGVLKR-----HHHTHSHQPP--------LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAH
        TNGVLKR     HHH H H+PP        +VV YKECL+NHA  LGA  LD CG+FMPSP ATP+D TSL+C ACGCHR+FH RD +DPISTLAINTA 
Subjt:  TNGVLKR-----HHHTHSHQPP--------LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAH

Query:  THIIEY
        TH+IEY
Subjt:  THIIEY

A0A6J1FJ49 zinc-finger homeodomain protein 10-like5.4e-3266.99Show/hide
Query:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI
        P SS K LP TNG+LKRH+  H+ QP L+V YKECL+NHA  LGA  LD CG+FMPSP A+  D TSL C ACGCHR+FH RD +DPISTL INTA TH+
Subjt:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI

Query:  IEY
        IEY
Subjt:  IEY

A0A6J1JL86 zinc-finger homeodomain protein 10-like7.1e-3268.93Show/hide
Query:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI
        P  S K  P TNG+LKRHH  H   PPLV  YKECL+NHA  LGA  LD CG+FMPSP ATPTD TSLKC ACGCHR+FH RD ++PISTLAIN+A TH+
Subjt:  PFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHI

Query:  IEY
        IEY
Subjt:  IEY

B0LK19 Zinc finger-homeodomain protein 1 (Fragment)7.1e-3270.41Show/hide
Query:  TNGVLKRHHHT--HSHQPP---LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY
        TNGVLKRHHH   H H+PP   +VV YKECL+NHA  LGA  L  CG+FMPSP ATP+D TSL+C ACGCHR+FH RD +DPISTLAINTA TH+IEY
Subjt:  TNGVLKRHHHT--HSHQPP---LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY

SwissProt top hitse value%identityAlignment
Q6ER21 Zinc-finger homeodomain protein 93.1e-1647.67Show/hide
Query:  LKFLPLT--NGVLKRHHHTHSHQPPL------VVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLR
        +K+ PL   NG +K+     +  P +         Y+ECL+NHA  LG   LD CG+FMPSP A P D TSL+C ACGCHR+FH R
Subjt:  LKFLPLT--NGVLKRHHHTHSHQPPL------VVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLR

Q9FIW9 Zinc-finger homeodomain protein 109.9e-2350Show/hide
Query:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY
        K +  +NG++KRHHH   H  PL+  YKECL+NHA  LG   LD CG+FMPSP +  +D TSLKC ACGCHR+FH RD  +   +  I    +  +EY
Subjt:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY

Q9LHF0 Zinc-finger homeodomain protein 98.9e-2450.98Show/hide
Query:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKD----PISTLAINTAHTHII
        K +  +NG++KRHHH H +     V YKECL+NHA  +G   LD CG+FMPSP +TP+D TSLKC ACGCHR+FH R+  D    P  +L  ++  T  I
Subjt:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKD----PISTLAINTAHTHII

Query:  EY
        EY
Subjt:  EY

Q9LXG0 Zinc-finger homeodomain protein 82.5e-1851.14Show/hide
Query:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAI
        K +  +NG    HHH  S +   V  YKECL+NHA G+G   LD CG+FMPSP     D  SL C ACGCHR+FH R+ +DP S  AI
Subjt:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAI

Q9SEZ1 Zinc-finger homeodomain protein 111.3e-1761.29Show/hide
Query:  VFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTL
        V YKECL+NHA  LG   LD CG+FMPSP AT TD +SL+C ACGCHR+FH RD  + ++ L
Subjt:  VFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTL

Arabidopsis top hitse value%identityAlignment
AT1G69600.1 zinc finger homeodomain 18.9e-1961.29Show/hide
Query:  VFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTL
        V YKECL+NHA  LG   LD CG+FMPSP AT TD +SL+C ACGCHR+FH RD  + ++ L
Subjt:  VFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTL

AT3G28920.1 homeobox protein 346.4e-2550.98Show/hide
Query:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKD----PISTLAINTAHTHII
        K +  +NG++KRHHH H +     V YKECL+NHA  +G   LD CG+FMPSP +TP+D TSLKC ACGCHR+FH R+  D    P  +L  ++  T  I
Subjt:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKD----PISTLAINTAHTHII

Query:  EY
        EY
Subjt:  EY

AT5G15210.1 homeobox protein 301.8e-1951.14Show/hide
Query:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAI
        K +  +NG    HHH  S +   V  YKECL+NHA G+G   LD CG+FMPSP     D  SL C ACGCHR+FH R+ +DP S  AI
Subjt:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAI

AT5G39760.1 homeobox protein 237.0e-2450Show/hide
Query:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY
        K +  +NG++KRHHH   H  PL+  YKECL+NHA  LG   LD CG+FMPSP +  +D TSLKC ACGCHR+FH RD  +   +  I    +  +EY
Subjt:  KFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY

AT5G60480.1 homeobox protein 263.5e-1554.84Show/hide
Query:  LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPIS
        +VV Y ECL+NHAV LG   LD CG+F P      TD  SL+C ACGCHR+FH R   D  S
Subjt:  LVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAAGAGTGACCCGTTTTCTTCCCTCAAGTTCCTCCCCCTCACCAACGGTGTTCTCAAGCGTCACCACCACACCCACTCCCACCAACCGCCCTTGGTTGTTTTTTA
CAAAGAATGTCTAAGAAATCACGCTGTCGGTTTAGGAGCTCAGACCTTGGACAGATGTGGCAAATTTATGCCTTCCCCTTTTGCCACACCCACTGATCTTACATCGCTTA
AGTGCGTCGCATGTGGTTGTCACCGGAGTTTCCACCTCCGTGACCTGAAAGACCCAATCTCCACTCTAGCCATTAATACAGCGCACACTCATATCATCGAGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAAGAGTGACCCGTTTTCTTCCCTCAAGTTCCTCCCCCTCACCAACGGTGTTCTCAAGCGTCACCACCACACCCACTCCCACCAACCGCCCTTGGTTGTTTTTTA
CAAAGAATGTCTAAGAAATCACGCTGTCGGTTTAGGAGCTCAGACCTTGGACAGATGTGGCAAATTTATGCCTTCCCCTTTTGCCACACCCACTGATCTTACATCGCTTA
AGTGCGTCGCATGTGGTTGTCACCGGAGTTTCCACCTCCGTGACCTGAAAGACCCAATCTCCACTCTAGCCATTAATACAGCGCACACTCATATCATCGAGTATTAG
Protein sequenceShow/hide protein sequence
MVKSDPFSSLKFLPLTNGVLKRHHHTHSHQPPLVVFYKECLRNHAVGLGAQTLDRCGKFMPSPFATPTDLTSLKCVACGCHRSFHLRDLKDPISTLAINTAHTHIIEY