; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G015150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25
Genome locationchr02:21032490..21033986
RNA-Seq ExpressionLsi02G015150
SyntenyLsi02G015150
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578608.1 CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2188.89Show/hide
Query:  MAMIDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        + +IDNASPASRRATD+QWK+IGR KHVFHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  MAMIDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
KAG6602472.1 CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2196.08Show/hide
Query:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        IDNASPASRRATDMQWK+IG EKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
KAG7033147.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2196.08Show/hide
Query:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        IDNASPASRRATDMQWK+IG EKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
XP_022961025.1 uncharacterized protein LOC111461653 isoform X1 [Cucurbita moschata]1.9e-2196.08Show/hide
Query:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        IDNASPASRRATDMQWK+IG EKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
XP_022961033.1 uncharacterized protein LOC111461653 isoform X2 [Cucurbita moschata]1.9e-2196.08Show/hide
Query:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        IDNASPASRRATDMQWK+IG EKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
TrEMBL top hitse value%identityAlignment
A0A0A0KS32 Uncharacterized protein1.0e-2088.89Show/hide
Query:  MAMIDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        + +IDNAS ASRR TDMQWKLIGREKH FHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  MAMIDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
A0A5A7T759 CLAVATA3/ESR (CLE)-related protein 251.4e-1771.43Show/hide
Query:  ASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR------HILKKWKMIDSG
        ASRR TDMQWKLIG+EKH FHWHSDFYSVSKRRVPNGPDPIHNR        ++ K ++ID G
Subjt:  ASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR------HILKKWKMIDSG
A0A6A1VIF3 CLAVATA3/ESR (CLE)-related protein 251.1e-0967.35Show/hide
Query:  SPASRRATDM--QWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        S  + R+T++   WKLIGREKHV HW SD   VS+RRVPNGPDPIHNRR
Subjt:  SPASRRATDM--QWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
A0A6J1HAQ4 uncharacterized protein LOC111461653 isoform X29.3e-2296.08Show/hide
Query:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        IDNASPASRRATDMQWK+IG EKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
A0A6J1HAS8 uncharacterized protein LOC111461653 isoform X19.3e-2296.08Show/hide
Query:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        IDNASPASRRATDMQWK+IG EKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
Subjt:  IDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28455.1 CLAVATA3/ESR-RELATED 251.3e-0436.36Show/hide
Query:  MAMIDNASPASRRATDMQ-WKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR
        + ++ N++P+   + +++  +  G++ ++FH       VSKR+VPNGPDPIHNR+
Subjt:  MAMIDNASPASRRATDMQ-WKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGATTGATAATGCCAGCCCAGCTTCCAGAAGAGCGACAGACATGCAGTGGAAGCTGATTGGAAGAGAGAAGCATGTCTTTCATTGGCATTCTGATTTTTATTC
TGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGCGACACATTCTTAAAAAGTGGAAAATGATTGATTCTGGTTATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGATTGATAATGCCAGCCCAGCTTCCAGAAGAGCGACAGACATGCAGTGGAAGCTGATTGGAAGAGAGAAGCATGTCTTTCATTGGCATTCTGATTTTTATTC
TGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGCGACACATTCTTAAAAAGTGGAAAATGATTGATTCTGGTTATTGGTAA
Protein sequenceShow/hide protein sequence
MAMIDNASPASRRATDMQWKLIGREKHVFHWHSDFYSVSKRRVPNGPDPIHNRRHILKKWKMIDSGYW