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Lsi02G015500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr02:21346740..21352875
RNA-Seq ExpressionLsi02G015500
SyntenyLsi02G015500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042354.1 proline-rich protein 2 [Cucumis melo var. makuwa]1.5e-2460Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM
        +G GVIKSIE K PE PKPPPPK AD PPPPKKVDPP PPKK    PP+K+DPPPP+K D PPPKKADPPPPK           DP PP+K  DPPPPK 
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM

Query:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG
        AD                 PPPPKKVDPPPVVV  P PV IP+P Q + Y V M VP  G
Subjt:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG

KAG6583723.1 hypothetical protein SDJN03_19655, partial [Cucurbita argyrosperma subsp. sororia]9.2e-1959.44Show/hide
Query:  QGYGVIKSIETK-----GPEIPKPPPPKPADPPPPKKVDP-------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKVVDPPPPKM
        +G GVIKSIE K      P+ P PPPPK ADPPPPKK DP       P PPKKA  PP K DPPPP+K D PPPKKADPPPPK DP PPKK  DPPPPK 
Subjt:  QGYGVIKSIETK-----GPEIPKPPPPKPADPPPPKKVDP-------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKVVDPPPPKM

Query:  ADPPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG
        ADPPP  K DPPP    +P P     PAQ + + V + VP  G
Subjt:  ADPPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG

XP_004139513.2 circumsporozoite protein [Cucumis sativus]1.3e-2563.92Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP---------------PLPPKKAVPP-----------KKLDPPPPQK-VDLPPPKKADPPPP-KVD
        +G GVIKSIE K PE PKPPPPKPADPPPPKKVDP               P PPKKA PP           K  DPPPPQK  D PPPKKADPPPP K D
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP---------------PLPPKKAVPP-----------KKLDPPPPQK-VDLPPPKKADPPPP-KVD

Query:  PLPPKKVVDPPPPKMADPPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG
        P PPKK VDPPPPK A+PPPPKKVDPPPVVV  PTPV IP+P Q + Y V M VP  G
Subjt:  PLPPKKVVDPPPPKMADPPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG

XP_008464282.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]1.5e-2460Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM
        +G GVIKSIE K PE PKPPPPK AD PPPPKKVDPP PPKK    PP+K+DPPPP+K D PPPKKADPPPPK           DP PP+K  DPPPPK 
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM

Query:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG
        AD                 PPPPKKVDPPPVVV  P PV IP+P Q + Y V M VP  G
Subjt:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG

XP_022973159.1 leucine-rich repeat extensin-like protein 3 isoform X3 [Cucurbita maxima]3.2e-1959.59Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKV------VDPPPPKM
        +G GVIKSIE K  +   PPPPK  DPPPPKK DP      P PPKKA  PP K DPPPP+K D PPPKKADPPPPK DP PPKK        DPPPPK 
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKV------VDPPPPKM

Query:  ADPPPPKKVDPPPVVVSNPTP--VYIPL-PAQRKSYRVVMRVPFLG
        ADPPPPKK DPPP   ++P P     PL PAQ + + V M VP  G
Subjt:  ADPPPPKKVDPPPVVVSNPTP--VYIPL-PAQRKSYRVVMRVPFLG

TrEMBL top hitse value%identityAlignment
A0A0A0LTA1 Uncharacterized protein1.3e-2663.76Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK--VDPLPPKKVVDPPPPKMAD-------
        +G GVIKSIE K PE PKPPPPKPADPPPPKKVDPP P KK    PP+K+DPPPP+K D PPPKKAD PPP    DP PP+K  DPPPPK AD       
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK--VDPLPPKKVVDPPPPKMAD-------

Query:  --------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG
                PPPPKKVDPPPVVV  PTPV IP+P Q + Y V M VP  G
Subjt:  --------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG

A0A1S3CL41 leucine-rich repeat extensin-like protein 37.1e-2560Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM
        +G GVIKSIE K PE PKPPPPK AD PPPPKKVDPP PPKK    PP+K+DPPPP+K D PPPKKADPPPPK           DP PP+K  DPPPPK 
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM

Query:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG
        AD                 PPPPKKVDPPPVVV  P PV IP+P Q + Y V M VP  G
Subjt:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG

A0A5A7TG02 Proline-rich protein 27.1e-2560Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM
        +G GVIKSIE K PE PKPPPPK AD PPPPKKVDPP PPKK    PP+K+DPPPP+K D PPPKKADPPPPK           DP PP+K  DPPPPK 
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPAD-PPPPKKVDPPLPPKK--AVPPKKLDPPPPQKVDLPPPKKADPPPPK----------VDPLPPKKVVDPPPPKM

Query:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG
        AD                 PPPPKKVDPPPVVV  P PV IP+P Q + Y V M VP  G
Subjt:  AD-----------------PPPPKKVDPPPVVVSNPTPVYIPLPAQRKSYRVVMRVPFLG

A0A6J1IAN1 leucine-rich repeat extensin-like protein 3 isoform X49.9e-1962.14Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKVVDPPPPKMADPPPP
        +G GVIKSIE K  +   PPPPK  DPPPPKK DP      P PPKKA  PP K DPPPP+K D PPPKKADPPPPK DP PPKK  DPPPPK ADPPPP
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKVVDPPPPKMADPPPP

Query:  KKVDPPPVVVSNPTP--VYIPL-PAQRKSYRVVMRVPFLG
        KK DPPP   ++P P     PL PAQ + + V M VP  G
Subjt:  KKVDPPPVVVSNPTP--VYIPL-PAQRKSYRVVMRVPFLG

A0A6J1IDR1 leucine-rich repeat extensin-like protein 3 isoform X31.5e-1959.59Show/hide
Query:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKV------VDPPPPKM
        +G GVIKSIE K  +   PPPPK  DPPPPKK DP      P PPKKA  PP K DPPPP+K D PPPKKADPPPPK DP PPKK        DPPPPK 
Subjt:  QGYGVIKSIETKGPEIPKPPPPKPADPPPPKKVDP------PLPPKKA-VPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKV------VDPPPPKM

Query:  ADPPPPKKVDPPPVVVSNPTP--VYIPL-PAQRKSYRVVMRVPFLG
        ADPPPPKK DPPP   ++P P     PL PAQ + + V M VP  G
Subjt:  ADPPPPKKVDPPPVVVSNPTP--VYIPL-PAQRKSYRVVMRVPFLG

SwissProt top hitse value%identityAlignment
P23093 Circumsporozoite protein7.8e-0550.51Show/hide
Query:  PPPPKPADPPPPKKVDPPLP-PKKAVPPKKLDPPPPQKVDLPPPKKADPPPPKV-DPLPPK-------KVVDPPPPKMADPPPPKKVDPPPVVVSNPTP
        PPPP P DPPPP   DPP P P    PP   DPPPP   D PPP   DPPPP   DP PP           DP PP   DPPPP   DPPP   ++P P
Subjt:  PPPPKPADPPPPKKVDPPLP-PKKAVPPKKLDPPPPQKVDLPPPKKADPPPPKV-DPLPPK-------KVVDPPPPKMADPPPPKKVDPPPVVVSNPTP

Arabidopsis top hitse value%identityAlignment
AT1G44191.1 ECA1 gametogenesis related family protein9.5e-0650Show/hide
Query:  PEIPK--PPPPKPADPPP-PKKVDPPLPPKKAVPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKVVDPPPPKMADPPPPKKVDPPPVVVSNPTP
        P  PK  PPPPKP+ PPP PKK  PP  P    P  K  PPPP+    PP  K  PPPPK  P PPK    PP PK + P PPK   PPP    +P P
Subjt:  PEIPK--PPPPKPADPPP-PKKVDPPLPPKKAVPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKVVDPPPPKMADPPPPKKVDPPPVVVSNPTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTACTAGGAAGACCAGTTATGTCTCGAAGAATAATACAAATAAACATGATTCGAAGAAAGTTGGAGCAATCGATATGAACTCCGCTAGTGTGGGAGGTTCCGT
CGAGAGGCAACCGAGCACACCGAGATTCCAGCCACAAGATTCTGCATCCGTCTATTCCGCGGCGGCTCCGGAGTCAAATGAAGGATGGTCCGTCCTTCCCGAGGTCCATA
GACGACTTGGCGGAGGCCGGAAGGGCGGCGAATCGAGTGGAGAAATCACGGCGTACAAAATCGTCGCTGAAAGGATCGTCGTGGGCTGGACCTTCGTCGAAATTAAGGCC
AGCGATAATTTCCGACCACTCGCGAAACCTCTTCCAGCCTCTAAGCCACCATTCATCGTCGTTATCGGCTGCCTTAATCCGCTCCCACCAAGTCTGCGAGGGACTGGATC
TCAGGCAAGGGATCCAGAAGCAACAGCCACGGCTAACGAAGGCGGCGTCGTGAAGGTCATCGCCATGGAAGCCATTTTCGTCGGAAGAGAGGTCGGGAGATGGCGCCAGA
GACATCAAGAGACAAAAAGAGGTCCAAATTTCTCTATTTTAGTTAAAAAGAAGAAAAAAAAAAAGGCCTTTTCGTTTTACAAATTCAATTATATAATTCAGGGATATGGA
GTTATTAAGAGCATTGAAACAAAAGGGCCTGAAATTCCCAAGCCGCCTCCGCCCAAGCCCGCCGATCCTCCTCCACCCAAAAAAGTCGATCCGCCGCTGCCACCCAAAAA
GGCCGTGCCTCCTAAAAAACTCGATCCCCCACCACCCCAAAAGGTCGATCTTCCACCCCCCAAAAAGGCCGACCCACCGCCACCCAAGGTCGATCCTCTGCCACCCAAAA
AAGTCGTCGATCCTCCTCCGCCCAAAATGGCTGACCCTCCACCTCCAAAGAAAGTTGATCCTCCACCGGTCGTCGTGTCGAACCCCACCCCGGTTTACATTCCGCTGCCG
GCTCAACGCAAGTCGTATCGGGTAGTCATGCGCGTGCCGTTTTTGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTACTAGGAAGACCAGTTATGTCTCGAAGAATAATACAAATAAACATGATTCGAAGAAAGTTGGAGCAATCGATATGAACTCCGCTAGTGTGGGAGGTTCCGT
CGAGAGGCAACCGAGCACACCGAGATTCCAGCCACAAGATTCTGCATCCGTCTATTCCGCGGCGGCTCCGGAGTCAAATGAAGGATGGTCCGTCCTTCCCGAGGTCCATA
GACGACTTGGCGGAGGCCGGAAGGGCGGCGAATCGAGTGGAGAAATCACGGCGTACAAAATCGTCGCTGAAAGGATCGTCGTGGGCTGGACCTTCGTCGAAATTAAGGCC
AGCGATAATTTCCGACCACTCGCGAAACCTCTTCCAGCCTCTAAGCCACCATTCATCGTCGTTATCGGCTGCCTTAATCCGCTCCCACCAAGTCTGCGAGGGACTGGATC
TCAGGCAAGGGATCCAGAAGCAACAGCCACGGCTAACGAAGGCGGCGTCGTGAAGGTCATCGCCATGGAAGCCATTTTCGTCGGAAGAGAGGTCGGGAGATGGCGCCAGA
GACATCAAGAGACAAAAAGAGGTCCAAATTTCTCTATTTTAGTTAAAAAGAAGAAAAAAAAAAAGGCCTTTTCGTTTTACAAATTCAATTATATAATTCAGGGATATGGA
GTTATTAAGAGCATTGAAACAAAAGGGCCTGAAATTCCCAAGCCGCCTCCGCCCAAGCCCGCCGATCCTCCTCCACCCAAAAAAGTCGATCCGCCGCTGCCACCCAAAAA
GGCCGTGCCTCCTAAAAAACTCGATCCCCCACCACCCCAAAAGGTCGATCTTCCACCCCCCAAAAAGGCCGACCCACCGCCACCCAAGGTCGATCCTCTGCCACCCAAAA
AAGTCGTCGATCCTCCTCCGCCCAAAATGGCTGACCCTCCACCTCCAAAGAAAGTTGATCCTCCACCGGTCGTCGTGTCGAACCCCACCCCGGTTTACATTCCGCTGCCG
GCTCAACGCAAGTCGTATCGGGTAGTCATGCGCGTGCCGTTTTTGGGTTAA
Protein sequenceShow/hide protein sequence
MFVTRKTSYVSKNNTNKHDSKKVGAIDMNSASVGGSVERQPSTPRFQPQDSASVYSAAAPESNEGWSVLPEVHRRLGGGRKGGESSGEITAYKIVAERIVVGWTFVEIKA
SDNFRPLAKPLPASKPPFIVVIGCLNPLPPSLRGTGSQARDPEATATANEGGVVKVIAMEAIFVGREVGRWRQRHQETKRGPNFSILVKKKKKKKAFSFYKFNYIIQGYG
VIKSIETKGPEIPKPPPPKPADPPPPKKVDPPLPPKKAVPPKKLDPPPPQKVDLPPPKKADPPPPKVDPLPPKKVVDPPPPKMADPPPPKKVDPPPVVVSNPTPVYIPLP
AQRKSYRVVMRVPFLG