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Lsi02G015560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionconserved peptide upstream open reading frame 33
Genome locationchr02:21412031..21413224
RNA-Seq ExpressionLsi02G015560
SyntenyLsi02G015560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016183.1 hypothetical protein SDJN02_21287, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-1670.59Show/hide
Query:  NNRKISIVTDLTIVKVSFWGFFSEVFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF
        N R+I    DL      F      VFETDE LGNNRAG VMGFCISPLGTPARLLWSTSFFRHKLMIF
Subjt:  NNRKISIVTDLTIVKVSFWGFFSEVFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF
KAG7033126.1 hypothetical protein SDJN02_07179, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-1797.78Show/hide
Query:  EVFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF
        EVFETDEELGNNRAGGVMGFC+SPLGTPARLLWSTSFFRHKLMIF
Subjt:  EVFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF
PHU27564.1 hypothetical protein BC332_05896 [Capsicum chinense]5.1e-0589.29Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF
PIN00164.1 hypothetical protein CDL12_27332 [Handroanthus impetiginosus]3.9e-0586.21Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
XP_030447493.1 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Syzygium oleosum]1.4e-0780Show/hide
Query:  EELGNNRAG-GVMGFCISPLGTPARLLWSTSFFRHKLMIF
        EELG    G GVMGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  EELGNNRAG-GVMGFCISPLGTPARLLWSTSFFRHKLMIF
TrEMBL top hitse value%identityAlignment
A0A2G3D9B2 Uncharacterized protein2.5e-0589.29Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF
A0A2G9G4C3 Uncharacterized protein1.9e-0586.21Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
A0A2G9GBV9 Uncharacterized protein2.1e-0479.31Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLW +SFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
A2NW02 A.thaliana homeobox gene Athb-1 mRNA5.5e-0582.76Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL +PARLLWSTSFFRHK+MIF
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01472.1 conserved peptide upstream open reading frame 331.4e-0885.71Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL +PARLLWSTSFFRHK+MIF
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTCTATTATTATCCGACAAGCTAGAACAACTAAATATGGAAATATATCCACCAAAATAAAGATCATGACCCTCTTTACCTCCAACGAGTTTAATGCATCTACAAT
TAACAACCGTAAGATCTCCATCGTGACAGACTTAACAATAGTAAAGGTTTCTTTTTGGGGTTTTTTCTCAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAG
CTGGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTTTGGAGCACCAGCTTCTTCCGCCACAAGCTTATGATTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTCTATTATTATCCGACAAGCTAGAACAACTAAATATGGAAATATATCCACCAAAATAAAGATCATGACCCTCTTTACCTCCAACGAGTTTAATGCATCTACAAT
TAACAACCGTAAGATCTCCATCGTGACAGACTTAACAATAGTAAAGGTTTCTTTTTGGGGTTTTTTCTCAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAG
CTGGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTTTGGAGCACCAGCTTCTTCCGCCACAAGCTTATGATTTTCTAA
Protein sequenceShow/hide protein sequence
MRSIIIRQARTTKYGNISTKIKIMTLFTSNEFNASTINNRKISIVTDLTIVKVSFWGFFSEVFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF