; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G015620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA exonuclease 4
Genome locationchr02:21466201..21470260
RNA-Seq ExpressionLsi02G015620
SyntenyLsi02G015620
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648890.1 hypothetical protein Csa_008189 [Cucumis sativus]3.2e-11578.21Show/hide
Query:  MNPLVLFARNIVDLLILLENISLGHCQNKSARTSLLHEDASFAWPSLTVLTHKGSIKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESEN
        MN LV FARNIVDLLILLENISLG          LL   A+            GS   D  S  TRGSGA+ALACKYVGGGSDGS+DICAK+CLIDE EN
Subjt:  MNPLVLFARNIVDLLILLENISLGHCQNKSARTSLLHEDASFAWPSLTVLTHKGSIKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESEN

Query:  VIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQ
        VIFYSYVKP+  VTNYRYETTG+R EHIRDAM +KQVQKKIQ++LYNGGEKAR+LVG  VEDDL+RLQIGY S MIRDTANYPPLMK+SKLCNSLKYLAQ
Subjt:  VIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQ

Query:  VYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
        VYLGF++QNGIQDPYEECIV MRLYKRMRSQVHR E +PMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
Subjt:  VYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

KAG7016187.1 REX4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-12179.21Show/hide
Query:  LGHCQNKSARTSLLHEDASFAWPSLTVLTHKGSIKKDANSR---------------------LTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENV
        +G C++K+A+TS   EDASFAWPSLTV THKGS KKDANSR                      TRGSG VALACKYVGGG DGSLD+CAK+CLIDESENV
Subjt:  LGHCQNKSARTSLLHEDASFAWPSLTVLTHKGSIKKDANSR---------------------LTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENV

Query:  IFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQV
        IFYSYVKPIIPVTNYRYE TG+R EH+RDAM LKQVQKKIQD+LYNGGEKARVLVGH VEDDL+RLQIGY S+MIRD ANYPPLMKTSKLCNSLKYLAQV
Subjt:  IFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQV

Query:  YLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
           FE+QNG+QDPYEEC+ GMRLYKRMRSQVHRIE HPMASDPQNKNNFA WRENEL+RMSPEQMLEISRSDYYCWCMD
Subjt:  YLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

XP_011656270.1 RNA exonuclease 4 [Cucumis sativus]1.7e-10886.82Show/hide
Query:  NSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGV
        +S  TRGSGA+ALACKYVGGGSDGS+DICAK+CLIDE ENVIFYSYVKP+  VTNYRYETTG+R EHIRDAM +KQVQKKIQ++LYNGGEKAR+LVG  V
Subjt:  NSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGV

Query:  EDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQR
        EDDL+RLQIGY S MIRDTANYPPLMK+SKLCNSLKYLAQVYLGF++QNGIQDPYEECIV MRLYKRMRSQVHR E +PMASDPQNKNNFAIWRENELQR
Subjt:  EDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQR

Query:  MSPEQMLEISRSDYYCWCMD
        MSPEQMLEISRSDYYCWCMD
Subjt:  MSPEQMLEISRSDYYCWCMD

XP_022938612.1 RNA exonuclease 4-like [Cucurbita moschata]1.2e-10989.35Show/hide
Query:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL
        TRGSG VALACKYVGGG DGSLD+CAK+CLIDESENVIFYSYVKPIIPVTNYRYE TG+R EH+RDAM LKQVQKKIQD+LYNGGEKARVLVGH VEDDL
Subjt:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL

Query:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE
        +RLQIGY S+MIRD ANYPPLMKTSKLCNSLKYLAQVYLGFE+QNG+QDPYEEC+ GMRLYKRMRSQVHRIE HPMASDPQNKNNFA WRE+EL+RMSPE
Subjt:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE

Query:  QMLEISRSDYYCWCMD
        QMLEISRSDYYCWCMD
Subjt:  QMLEISRSDYYCWCMD

XP_022993635.1 RNA exonuclease 4-like [Cucurbita maxima]7.0e-11089.35Show/hide
Query:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL
        TRGSG VALACKYVGGG DGSLD+CAK+CLIDESENVIFYSYVKP IPVTNYRYETTG+R EH+RDAM LKQVQKKIQD+LYNGGEKARVLVGH VEDDL
Subjt:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL

Query:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE
        +RLQIGY S+MIRD ANYPPLMKTSKLCNSLKYLAQVYLGFE+QNG+QDPYEEC+ GMRLYKRMRSQVHRIE HPMASDPQNKNNFA WRE+EL+RMSPE
Subjt:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE

Query:  QMLEISRSDYYCWCMD
        QMLEISRSDYYCWCMD
Subjt:  QMLEISRSDYYCWCMD

TrEMBL top hitse value%identityAlignment
A0A6J1BXL4 RNA exonuclease 44.3e-10584.19Show/hide
Query:  RGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLR
        R +G VALACKYVGGG DGSLDICAK+CLIDE+ENVIFYSYVKPIIPVTNYR+ETTG+R EH+RDAM LKQVQKKIQ++LYNGGEKARVLVGHGVEDDL+
Subjt:  RGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLR

Query:  RLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQ
        RLQIGY   +IRDTANYPPLMKTSKLCNSLKYLAQVYLGF++QNGIQDPYE+C+  MRLYKRMRSQVH+IE +PMASDPQNKNNF IWR+NEL+RM+PE 
Subjt:  RLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQ

Query:  MLEISRSDYYCWCMD
        ML+ISRSDYYCWC+D
Subjt:  MLEISRSDYYCWCMD

A0A6J1BZE0 RNA exonuclease 44.3e-10584.19Show/hide
Query:  RGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLR
        R +G VALACKYVGGG DGSLDICAK+CLIDE+ENVIFYSYVKPIIPVTNYR+ETTG+R EH+RDAM LKQVQKKIQ++LYNGGEKARVLVGHGVEDDL+
Subjt:  RGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLR

Query:  RLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQ
        RLQIGY   +IRDTANYPPLMKTSKLCNSLKYLAQVYLGF++QNGIQDPYE+C+  MRLYKRMRSQVH+IE +PMASDPQNKNNF IWR+NEL+RM+PE 
Subjt:  RLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQ

Query:  MLEISRSDYYCWCMD
        ML+ISRSDYYCWC+D
Subjt:  MLEISRSDYYCWCMD

A0A6J1FEK0 RNA exonuclease 45.8e-11089.35Show/hide
Query:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL
        TRGSG VALACKYVGGG DGSLD+CAK+CLIDESENVIFYSYVKPIIPVTNYRYE TG+R EH+RDAM LKQVQKKIQD+LYNGGEKARVLVGH VEDDL
Subjt:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL

Query:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE
        +RLQIGY S+MIRD ANYPPLMKTSKLCNSLKYLAQVYLGFE+QNG+QDPYEEC+ GMRLYKRMRSQVHRIE HPMASDPQNKNNFA WRE+EL+RMSPE
Subjt:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE

Query:  QMLEISRSDYYCWCMD
        QMLEISRSDYYCWCMD
Subjt:  QMLEISRSDYYCWCMD

A0A6J1JZ30 RNA exonuclease 43.4e-11089.35Show/hide
Query:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL
        TRGSG VALACKYVGGG DGSLD+CAK+CLIDESENVIFYSYVKP IPVTNYRYETTG+R EH+RDAM LKQVQKKIQD+LYNGGEKARVLVGH VEDDL
Subjt:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDL

Query:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE
        +RLQIGY S+MIRD ANYPPLMKTSKLCNSLKYLAQVYLGFE+QNG+QDPYEEC+ GMRLYKRMRSQVHRIE HPMASDPQNKNNFA WRE+EL+RMSPE
Subjt:  RRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPE

Query:  QMLEISRSDYYCWCMD
        QMLEISRSDYYCWCMD
Subjt:  QMLEISRSDYYCWCMD

A0A6P5TII1 RNA exonuclease 47.1e-9269.66Show/hide
Query:  IKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNG-------
        I+ +  +  TRG+  VALACK VGGGSDGSLD+CAK+CLIDE EN+IF SYVKP++PVTNYRYETTG+R E++RDAM L+QVQKKIQD L NG       
Subjt:  IKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNG-------

Query:  --GEKARVLVGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQN
          G KAR+LVGHG++ DL  LQ+ Y  VMIRDTA YPPLMKTSKL NSLKYL Q YLG+++Q GIQDPYE+C+  M+LY RMRSQVH+IE +P+ASDPQN
Subjt:  --GEKARVLVGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQN

Query:  KNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD
        +NNFA WR+NEL+RMSPEQMLE SRSDYYCWC+D
Subjt:  KNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD

SwissProt top hitse value%identityAlignment
O94375 RNA exonuclease 41.7e-1831.49Show/hide
Query:  SRLTRGSGA------VALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVL
        S+LTR +        +A+ C+ VG   D  + + A++ +++   +V++ +YV+P   VT++R   +GV+  H+RDA   ++VQ ++  +L N     RVL
Subjt:  SRLTRGSGA------VALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVL

Query:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSK-LCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRI
        VGH V +DL+ L + +   MIRDT+ +    K +K     LK LA+V LG ++Q+G     ++    M LYK+++ ++  +
Subjt:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSK-LCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRI

Q08237 RNA exonuclease 42.2e-1829.41Show/hide
Query:  VALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLRRLQIG
        +A+ C++VG G +G     A+I +++   +V+   +VKP   V  +R   +G++ EH+++A+  K+ QKK  D+L     + R+LVGH ++ DL  L + 
Subjt:  VALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLRRLQIG

Query:  YSSVMIRDTANYPPLMK--TSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKH
        +   ++RDT+ + P  K        SLK L +  L   +Q G     E+    M LYK+ +++  +I ++
Subjt:  YSSVMIRDTANYPPLMK--TSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKH

Q6PAQ4 RNA exonuclease 43.8e-1831.82Show/hide
Query:  KKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLV
        K+ A   LT+   A+AL C+ VG G  G   I A++ ++++    ++  YVKP  PVT+YR   +G+R E+++     + V+K++ ++L     K R+LV
Subjt:  KKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLV

Query:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCN-SLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQ
        GH + +DL+ L + +    IRDT  + P     K    SLK L++  LG  VQ       ++    MRLY  ++ +
Subjt:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCN-SLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQ

Q91560 RNA exonuclease 41.0e-1834.5Show/hide
Query:  IKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVL
        +K+ A   LTR    VA+ C+ VG G DG   I A++ +++     ++  YVKP   VT+YR   +G+R E ++     K VQK++ ++L     + R L
Subjt:  IKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVL

Query:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCN-SLKYLAQVYLGFEVQNGIQDPYEECIVGMRLY
        VGH V +DL+ L + +    IRDT  Y P  +  K    SLK L +  L  +VQ G     ++    MRLY
Subjt:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCN-SLKYLAQVYLGFEVQNGIQDPYEECIVGMRLY

Q9GZR2 RNA exonuclease 43.1e-2030.93Show/hide
Query:  IKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVL
        +K+ A   LTR   A+AL C+ VG G  G   + A++ ++++    ++  YVKP  PVT+YR   +G+R E+++    L+ VQK++ ++L     K R+L
Subjt:  IKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVL

Query:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCN-SLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRI--EKHPMASDPQN
        VGH + +DL+ L + +    IRDT  Y P     K    SL+ L++  LG +VQ       ++    MRLY  ++ +   +  ++ P+ + P +
Subjt:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCN-SLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRI--EKHPMASDPQN

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein6.6e-5042.86Show/hide
Query:  ANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVL---YNGGEKARVLV
        A SRL     A+AL C+ VGGG+DG++D CA +CL+D+ ENVIF ++V+P++PVT+YR+E TG+ +E ++D M L+ V++++   L    N G    +LV
Subjt:  ANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVL---YNGGEKARVLV

Query:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWREN
        GH +  D+  L++ Y S ++RDTA Y PLMKT+ +  SLKYL + YLG+++Q G  + YE+C+  MRLYKRMR Q H      + S     N     +++
Subjt:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWREN

Query:  ELQRMSPEQMLEISRSDYYCWCMD
        +L++M+ E++ + S S+Y CWC+D
Subjt:  ELQRMSPEQMLEISRSDYYCWCMD

AT2G48100.2 Exonuclease family protein6.6e-5042.86Show/hide
Query:  ANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVL---YNGGEKARVLV
        A SRL     A+AL C+ VGGG+DG++D CA +CL+D+ ENVIF ++V+P++PVT+YR+E TG+ +E ++D M L+ V++++   L    N G    +LV
Subjt:  ANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVL---YNGGEKARVLV

Query:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWREN
        GH +  D+  L++ Y S ++RDTA Y PLMKT+ +  SLKYL + YLG+++Q G  + YE+C+  MRLYKRMR Q H      + S     N     +++
Subjt:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWREN

Query:  ELQRMSPEQMLEISRSDYYCWCMD
        +L++M+ E++ + S S+Y CWC+D
Subjt:  ELQRMSPEQMLEISRSDYYCWCMD

AT2G48100.3 Exonuclease family protein6.6e-5042.86Show/hide
Query:  ANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVL---YNGGEKARVLV
        A SRL     A+AL C+ VGGG+DG++D CA +CL+D+ ENVIF ++V+P++PVT+YR+E TG+ +E ++D M L+ V++++   L    N G    +LV
Subjt:  ANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVL---YNGGEKARVLV

Query:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWREN
        GH +  D+  L++ Y S ++RDTA Y PLMKT+ +  SLKYL + YLG+++Q G  + YE+C+  MRLYKRMR Q H      + S     N     +++
Subjt:  GHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWREN

Query:  ELQRMSPEQMLEISRSDYYCWCMD
        +L++M+ E++ + S S+Y CWC+D
Subjt:  ELQRMSPEQMLEISRSDYYCWCMD

AT3G27970.1 Exonuclease family protein2.0e-8364Show/hide
Query:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNG---------GEKARVL
        +R    VAL+CK VGGGSDGSLD+CA++C+ DES+NVIF++YVKP + VT+YRYETTG+R E++RDAM LKQVQ+KIQ+ L NG         G KAR+L
Subjt:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNG---------GEKARVL

Query:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRE
        VGHG++ DL RLQ+ Y S MIRDTA YPPLMKTSKL NSLKYL Q YLG++V  GIQDPYE+C+  MRLY RMR Q H+IE +P+A+D QN++N   WR+
Subjt:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRE

Query:  NELQRMSPEQMLEISRSDYYCWCMD
        +E +RMSP++ML ISRSDYYCWC+D
Subjt:  NELQRMSPEQMLEISRSDYYCWCMD

AT5G40310.1 Exonuclease family protein6.4e-8564Show/hide
Query:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNG---------GEKARVL
        +R    VAL+CK VGGGSDGSLD+CA++C+ DESENV+F++YVKP IPVTNYRYE TG+R E++RDAM LK  Q+K+Q+ L NG           KAR+L
Subjt:  TRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPIIPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNG---------GEKARVL

Query:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRE
        VGHG+++ L  LQ+ YSS MIRDTA YPPLMK+SKL NSLKYL Q YLG+++  GIQDPYE+C+  MRLY RMR Q HR E +P+ASD QN NNFA WR+
Subjt:  VGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIVGMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRE

Query:  NELQRMSPEQMLEISRSDYYCWCMD
        NEL+RMSPE++L++SRSDYYCWC+D
Subjt:  NELQRMSPEQMLEISRSDYYCWCMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCACTTGTGCTATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAGTGCAAGAACATCTTTGCTACA
CGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTCCATCAAGAAAGATGCCAATTCTCGGCTAACTCGAGGCTCGGGCGCCGTGGCGTTAG
CTTGCAAATATGTAGGTGGGGGCAGTGATGGGTCGCTGGACATATGTGCCAAGATTTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCCATA
ATTCCTGTCACAAATTATAGGTATGAAACGACGGGAGTTCGTCAAGAACACATTCGAGATGCAATGCTGCTAAAGCAAGTTCAAAAGAAAATTCAAGACGTCCTCTACAA
TGGAGGTGAGAAGGCTAGGGTTCTTGTCGGTCACGGTGTCGAAGATGATCTCAGACGCCTACAAATTGGATACTCATCCGTCATGATAAGGGACACAGCAAATTATCCAC
CATTGATGAAGACAAGCAAGCTCTGCAATTCACTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGAGGTTCAAAATGGGATACAAGATCCTTATGAAGAATGTATTGTG
GGCATGAGATTGTACAAGAGAATGAGATCACAAGTTCATAGGATAGAGAAGCATCCAATGGCTTCTGACCCACAAAACAAAAATAACTTTGCTATTTGGAGGGAAAATGA
GCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTAA
mRNA sequenceShow/hide mRNA sequence
CATAAGTGCGCAGCTTGTTTCAGGCAATTCAACAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCCACTTGTGCTATTTGCAAGAA
ACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAGTGCAAGAACATCTTTGCTACACGAGGATGCAAGTTTTGCTTGGCCATCC
TTGACAGTTCTTACTCACAAAGGCTCCATCAAGAAAGATGCCAATTCTCGGCTAACTCGAGGCTCGGGCGCCGTGGCGTTAGCTTGCAAATATGTAGGTGGGGGCAGTGA
TGGGTCGCTGGACATATGTGCCAAGATTTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCCATAATTCCTGTCACAAATTATAGGTATGAAA
CGACGGGAGTTCGTCAAGAACACATTCGAGATGCAATGCTGCTAAAGCAAGTTCAAAAGAAAATTCAAGACGTCCTCTACAATGGAGGTGAGAAGGCTAGGGTTCTTGTC
GGTCACGGTGTCGAAGATGATCTCAGACGCCTACAAATTGGATACTCATCCGTCATGATAAGGGACACAGCAAATTATCCACCATTGATGAAGACAAGCAAGCTCTGCAA
TTCACTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGAGGTTCAAAATGGGATACAAGATCCTTATGAAGAATGTATTGTGGGCATGAGATTGTACAAGAGAATGAGAT
CACAAGTTCATAGGATAGAGAAGCATCCAATGGCTTCTGACCCACAAAACAAAAATAACTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATG
TTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTAATTGAGGATTTGAGATAGCCTTCTTCAACTCCATAGCAAGTTCTTTATTGTGTCAAGCATATAATA
ACATATAGATTTATT
Protein sequenceShow/hide protein sequence
MNPLVLFARNIVDLLILLENISLGHCQNKSARTSLLHEDASFAWPSLTVLTHKGSIKKDANSRLTRGSGAVALACKYVGGGSDGSLDICAKICLIDESENVIFYSYVKPI
IPVTNYRYETTGVRQEHIRDAMLLKQVQKKIQDVLYNGGEKARVLVGHGVEDDLRRLQIGYSSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFEVQNGIQDPYEECIV
GMRLYKRMRSQVHRIEKHPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMD