; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G015730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L12, chloroplastic-like
Genome locationchr02:21594714..21595289
RNA-Seq ExpressionLsi02G015730
SyntenyLsi02G015730
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000206 - Ribosomal protein L7/L12
IPR008932 - Ribosomal protein L7/L12, oligomerisation
IPR013823 - Ribosomal protein L7/L12, C-terminal
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR036235 - Ribosomal protein L7/L12, oligomerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033112.1 50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-7591.67Show/hide
Query:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLSTL TL SP HLSYSHSSFSTQS  STTLQFP   SSTA SHRAT+LRPIAAVSAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        AVVAAP G A GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

XP_022960313.1 50S ribosomal protein L12, chloroplastic-like [Cucurbita moschata]1.7e-7591.67Show/hide
Query:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLSTL TL SP HLSYSHSSFSTQS  STTLQFP   SSTA SHRAT+LRPIAAVSAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        AVVAAP G A GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

XP_022989905.1 50S ribosomal protein L12, chloroplastic [Cucurbita maxima]4.2e-7491.15Show/hide
Query:  MASTLSTLT-LISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLSTLT L SP HLSYSHSSFSTQS  STTLQFP   SSTA SHRAT LRPIAAVSAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLT-LISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
         VVAAP G A GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

XP_023536532.1 50S ribosomal protein L12, chloroplastic-like [Cucurbita pepo subsp. pepo]1.7e-7591.67Show/hide
Query:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLSTL TL SP+HLSYSHSSFSTQS  STTLQFP   SSTA SHRAT+LRPIAAVSAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        AVVAAP G A GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

XP_038890576.1 50S ribosomal protein L12, chloroplastic-like [Benincasa hispida]5.5e-8294.24Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA
        MASTLS LTL SPSHLSYSHSS ST SFKSTTLQFPS+LSS A+SHRATHLRPIAA+SAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAA+FAPAA
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA

Query:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        VVAAPGG AGG+AAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
Subjt:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

TrEMBL top hitse value%identityAlignment
A0A6J1BXR2 50S ribosomal protein L12, chloroplastic-like5.6e-7289.58Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSS-TAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLSTLTL SPS+LS+S  S ST S KS  +QFP Y SS  AISHRAT LRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSS-TAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        AVVAAPG    GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

A0A6J1FMH9 50S ribosomal protein L12, chloroplastic-like4.3e-7287.43Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA
        MASTLSTLTL +PS LS+SHSSFST S K TTL F        +SHR T LRPIAAVSAPEKIEKLGSDISNLTLEEAR+LVDFLQDKLGVSAAAFAPAA
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA

Query:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        VVAAPGGVAGGDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALT+LALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKI IV
Subjt:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

A0A6J1H8H9 50S ribosomal protein L12, chloroplastic-like8.3e-7691.67Show/hide
Query:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLSTL TL SP HLSYSHSSFSTQS  STTLQFP   SSTA SHRAT+LRPIAAVSAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTL-TLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        AVVAAP G A GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

A0A6J1JNN0 50S ribosomal protein L12, chloroplastic2.0e-7491.15Show/hide
Query:  MASTLSTLT-LISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLSTLT L SP HLSYSHSSFSTQS  STTLQFP   SSTA SHRAT LRPIAAVSAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLT-LISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
         VVAAP G A GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

A0A6J1JTI3 50S ribosomal protein L12, chloroplastic1.1e-7287.96Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA
        MASTLSTLTL +PS LS+SHSSFST S K TTL FP        SHRAT LRPIAAVSAPEKIEKLGSDISNLTLEEAR+LVDFLQDKLGVSAAAFAPAA
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA

Query:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        VVAAPGGVAGGD AAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALT+LALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKI IV
Subjt:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

SwissProt top hitse value%identityAlignment
P02398 50S ribosomal protein L12, chloroplastic5.2e-5168.04Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAI---SHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFA
        MA+T +  TL  PS    SH + ST       LQFP   ++  I   S R T LRPIAAV APEKIE+LG+ +S LTLEEAR+LVD+LQDKLGVSAA+FA
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAI---SHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFA

Query:  PAAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        PAA VAAPG  A    AA AVEEKTEFDV I++VPSNARI+VIKAVRALTSL LKEAKELIEGLPKK KEGVSK++AEDAKKQLE+AGAK++IV
Subjt:  PAAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

P24929 50S ribosomal protein L12, chloroplastic1.2e-5268.59Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISH-RATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA
        MASTLST+TL SPS  S + S+ ++  F    L+FP  + +  + H RAT LRP+AAV APEK+ +LG +ISNLTL +A+ LV++LQDKLGV+AA+FAPA
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISH-RATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
        AV AAPG  A    A   VEEKTEFDVVI++VPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEGVSK+EAEDAKKQLEEAGAK++I
Subjt:  AVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI

P36210 50S ribosomal protein L12-1, chloroplastic5.8e-5067.01Show/hide
Query:  ASTLSTLTLISPSHLSY-SHSSFSTQSFKSTTLQFPSYL---SSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFA
        ++TLS  T I  S  SY + +S +    ++TT++FPS     SS+ ++HRATHLRPIAAV APEKIEK+GS+IS+LTLEEAR+LVD+LQDK GVS  + A
Subjt:  ASTLSTLTLISPSHLSY-SHSSFSTQSFKSTTLQFPSYL---SSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFA

Query:  P-AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
        P AA VAAP   A G AAA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++K+EAE+AKK LEEAGAK++I
Subjt:  P-AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI

P36212 50S ribosomal protein L12-3, chloroplastic4.9e-4967.36Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSF--KSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP
        MAST  TL++ +    S   +S ST  F  K T ++FP  LSS++ SHRA +LRPI+AV APEKIEK+GS+IS+LTLEEAR+LVD+LQDK GVS  + AP
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSF--KSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP

Query:  -AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
         AA VAAP   A G AAA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++K+EAE+AKK LEEAGAK++I
Subjt:  -AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI

P36688 50S ribosomal protein L12, chloroplastic3.3e-5369.47Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA
        MASTLST+TL SPS  S + S+ ++  F   TL+FP   +    + RAT LRP+AAV APEK+ +LG +ISNLTL +A+ LV++LQDKLGV+AA+FAPAA
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAA

Query:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
        VVAAPG  A    A   VEEKTEFDVVI++VPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEGVSK+EAEDAKKQLEEAGAK++I
Subjt:  VVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI

Arabidopsis top hitse value%identityAlignment
AT3G27830.1 ribosomal protein L12-A4.1e-5167.01Show/hide
Query:  ASTLSTLTLISPSHLSY-SHSSFSTQSFKSTTLQFPSYL---SSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFA
        ++TLS  T I  S  SY + +S +    ++TT++FPS     SS+ ++HRATHLRPIAAV APEKIEK+GS+IS+LTLEEAR+LVD+LQDK GVS  + A
Subjt:  ASTLSTLTLISPSHLSY-SHSSFSTQSFKSTTLQFPSYL---SSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFA

Query:  P-AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
        P AA VAAP   A G AAA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++K+EAE+AKK LEEAGAK++I
Subjt:  P-AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI

AT3G27840.1 ribosomal protein L12-B1.1e-4054.92Show/hide
Query:  ASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFP---SYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP
        A+TLS  T I  S  S   +S      +  +++FP      SS+ +SHRA +L PI+AV  P+KI+K+GS+IS+LTLEE+R+LVD++QDK GVS    AP
Subjt:  ASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFP---SYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP

Query:  AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV
        AA    P    GG  A  +VE +T FDVVI DVP   RIAVI A+RA+TSL+L E+KELIEG PKKFKEGV+K+EAE+ K QLEEAGAK++IV
Subjt:  AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV

AT3G27850.1 ribosomal protein L12-C3.5e-5067.36Show/hide
Query:  MASTLSTLTLISPSHLSYSHSSFSTQSF--KSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP
        MAST  TL++ +    S   +S ST  F  K T ++FP  LSS++ SHRA +LRPI+AV APEKIEK+GS+IS+LTLEEAR+LVD+LQDK GVS  + AP
Subjt:  MASTLSTLTLISPSHLSYSHSSFSTQSF--KSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP

Query:  -AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
         AA VAAP   A G AAA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++K+EAE+AKK LEEAGAK++I
Subjt:  -AAVVAAPGGVAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI

AT4G36420.1 Ribosomal protein L12 family protein1.5e-1336.6Show/hide
Query:  LSTLTLISPSHLSYSHSSFSTQ--SFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVS----AAAFAP
        +  L +IS SH S    S  T+  S +  T+Q  SY S    S               E + K+ +++SNLTL E   L + L+ KL +S     AA  P
Subjt:  LSTLTLISPSHLSYSHSSFSTQ--SFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVS----AAAFAP

Query:  AAVVAAPGG--VAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
           +   G    AGG+   +  E KT FDV+++   + ++I VIK VR +T+L LKEAK+L+E  P   K+GVSKEEAE   ++L+  GAK+A+
Subjt:  AAVVAAPGG--VAGGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI

AT4G37660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein2.4e-1137.01Show/hide
Query:  HRATHL----RPIAAVSAPE----KIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGGVAGGDAAAEA-VEEKTEFDVVIEDVPSNAR
        HR T L    R + AV++PE    K+E++  D+  L   E          K+G++    A    VA  G V    A+ E    EKT FDV +E   + ++
Subjt:  HRATHL----RPIAAVSAPE----KIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGGVAGGDAAAEA-VEEKTEFDVVIEDVPSNAR

Query:  IAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI
        I VIK +RA T L LKEAK L+E  P   K G++KEEAE   ++L+  GA +A+
Subjt:  IAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACACTCTCCACTCTCACCCTCATTTCCCCATCTCACCTTTCTTATTCCCATTCCTCTTTCTCCACTCAGTCCTTCAAATCCACAACTCTCCAATTCCCATC
CTACCTTTCCTCCACAGCCATCTCCCACCGCGCCACCCACCTCCGCCCCATTGCCGCCGTCTCAGCCCCTGAGAAAATCGAAAAGCTCGGCTCCGACATCTCCAACCTCA
CCCTTGAAGAGGCCCGCCTTCTGGTCGACTTCCTCCAAGACAAGCTTGGAGTCTCCGCCGCTGCCTTCGCCCCGGCTGCTGTTGTGGCAGCACCCGGAGGCGTCGCTGGC
GGTGATGCGGCAGCGGAGGCAGTGGAGGAGAAGACGGAATTCGATGTGGTGATTGAGGACGTGCCTAGCAATGCTAGAATTGCAGTGATTAAGGCAGTGAGAGCATTGAC
AAGCTTGGCTTTGAAGGAAGCCAAAGAACTCATTGAAGGCCTGCCCAAGAAGTTCAAGGAAGGAGTTTCGAAAGAAGAAGCTGAGGATGCCAAGAAACAGCTTGAAGAAG
CTGGAGCTAAAATCGCCATTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACACTCTCCACTCTCACCCTCATTTCCCCATCTCACCTTTCTTATTCCCATTCCTCTTTCTCCACTCAGTCCTTCAAATCCACAACTCTCCAATTCCCATC
CTACCTTTCCTCCACAGCCATCTCCCACCGCGCCACCCACCTCCGCCCCATTGCCGCCGTCTCAGCCCCTGAGAAAATCGAAAAGCTCGGCTCCGACATCTCCAACCTCA
CCCTTGAAGAGGCCCGCCTTCTGGTCGACTTCCTCCAAGACAAGCTTGGAGTCTCCGCCGCTGCCTTCGCCCCGGCTGCTGTTGTGGCAGCACCCGGAGGCGTCGCTGGC
GGTGATGCGGCAGCGGAGGCAGTGGAGGAGAAGACGGAATTCGATGTGGTGATTGAGGACGTGCCTAGCAATGCTAGAATTGCAGTGATTAAGGCAGTGAGAGCATTGAC
AAGCTTGGCTTTGAAGGAAGCCAAAGAACTCATTGAAGGCCTGCCCAAGAAGTTCAAGGAAGGAGTTTCGAAAGAAGAAGCTGAGGATGCCAAGAAACAGCTTGAAGAAG
CTGGAGCTAAAATCGCCATTGTTTAA
Protein sequenceShow/hide protein sequence
MASTLSTLTLISPSHLSYSHSSFSTQSFKSTTLQFPSYLSSTAISHRATHLRPIAAVSAPEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGGVAG
GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV