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Lsi02G015900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR6-like
Genome locationchr02:21789005..21789322
RNA-Seq ExpressionLsi02G015900
SyntenyLsi02G015900
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578666.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4187.5Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGGFE EGKKWVIAGLPAR SLKPI+TKS+AKDGEDDGEK    TPTAKEARIPEKL CP APRKRRSLKS SNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

KAG7016206.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-4187.5Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGGFE EGKKWVIAGLPAR SLKPI+TKS+AKDGEDDGEK    TPTAKEARIPEKL CP APRKRRSLKS SNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

XP_004142790.1 cyclin-dependent protein kinase inhibitor SMR6 [Cucumis sativus]1.5e-4189Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFE E KKWVIAGL AR SLKPI+TKSK K+GEDDG+KTPT KEARIPEKLGCPPAPRKRRSLKS SNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV

XP_008458799.1 PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo]3.1e-4290Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFEAE KKWVIAGL AR SLKPI+TKSK K+GE+DGEKTPT KEARIPEKLGCPPAPRKRRSLKS SNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV

XP_038890813.1 cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida]2.3e-4595Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQIDGGFEAEGKKWVIAGLP R SLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKS SNQN++REFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV

TrEMBL top hitse value%identityAlignment
A0A0A0KUE2 Uncharacterized protein7.4e-4289Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFE E KKWVIAGL AR SLKPI+TKSK K+GEDDG+KTPT KEARIPEKLGCPPAPRKRRSLKS SNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV

A0A1S3C883 uncharacterized protein LOC1034981001.5e-4290Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFEAE KKWVIAGL AR SLKPI+TKSK K+GE+DGEKTPT KEARIPEKLGCPPAPRKRRSLKS SNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV

A0A5D3BY33 Uncharacterized protein1.5e-4290Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV
        MGFSKKSQID GFEAE KKWVIAGL AR SLKPI+TKSK K+GE+DGEKTPT KEARIPEKLGCPPAPRKRRSLKS SNQNHMREFFNPPDLESVFKLRV
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV

A0A6J1FHD8 cyclin-dependent protein kinase inhibitor SMR61.8e-4086.54Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGGFE EGKKWVIAGLPAR SLKPI+TK +AKDGEDDGEK    TPTAKEARIPEKL CP APRKRRSLKS SNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

A0A6J1JVL3 cyclin-dependent protein kinase inhibitor SMR6-like1.1e-4087.5Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        MGFSKKSQIDGG EAEGKKWVIAGLPAR SLKPISTKS+AKDGEDD EK    TPTAKEARIPEKL CP APRKRRSLKS SNQNH REFFNPPDLESVF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEK----TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

Query:  KLRV
        K+RV
Subjt:  KLRV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR131.5e-0448.94Show/hide
Query:  TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        TP AK++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Subjt:  TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR154.5e-1246.73Show/hide
Query:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFFNPPDL
        MGFS K+  Q D  F    EGKK VI G+    ++KPIS  S A    +D +    TPTA   RIP  + CPPAP+KR+ +LK        REFF+PPDL
Subjt:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFFNPPDL

Query:  ESVFKLR
        E+VF  R
Subjt:  ESVFKLR

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR65.6e-2356.64Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAK------------DGEDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFF
        MGFSKKSQ +GG E++GKKWVIAG+  R SLKP+ TK +A             + E++   TPTAKE +IPE L CPPAPRKRR +LK RSN   +REFF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAK------------DGEDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFF

Query:  NPP-DLESVFKLR
         PP DLE+VF  R
Subjt:  NPP-DLESVFKLR

Q9LVX6 Cyclin-dependent protein kinase inhibitor SMR74.2e-1041.84Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTK--SKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        MG SKKSQ+    + +GKK++ A    R SLKP+ TK     ++ ED    TPTA+ A+ PE   CP APRKR  +    N   +  F  P D E VF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTK--SKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

Q9SAD3 Cyclin-dependent protein kinase inhibitor SMR82.2e-1142.31Show/hide
Query:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPARPSLKPISTKS----KAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDL
        MG+S K   Q+DG      +GKKWVIAG+P+R  LK I+          + +D    TPTA   RIP    CP AP+KR+     S     R++F+PPDL
Subjt:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPARPSLKPISTKS----KAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDL

Query:  ESVF
        E+VF
Subjt:  ESVF

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein1.6e-1242.31Show/hide
Query:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPARPSLKPISTKS----KAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDL
        MG+S K   Q+DG      +GKKWVIAG+P+R  LK I+          + +D    TPTA   RIP    CP AP+KR+     S     R++F+PPDL
Subjt:  MGFSKK--SQIDGGF--EAEGKKWVIAGLPARPSLKPISTKS----KAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDL

Query:  ESVF
        E+VF
Subjt:  ESVF

AT1G60783.1 unknown protein3.2e-1346.73Show/hide
Query:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFFNPPDL
        MGFS K+  Q D  F    EGKK VI G+    ++KPIS  S A    +D +    TPTA   RIP  + CPPAP+KR+ +LK        REFF+PPDL
Subjt:  MGFSKKS--QIDGGFE--AEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGE---KTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFFNPPDL

Query:  ESVFKLR
        E+VF  R
Subjt:  ESVFKLR

AT3G20898.1 unknown protein1.1e-0548.94Show/hide
Query:  TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        TP AK++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Subjt:  TPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

AT3G27630.1 unknown protein3.0e-1141.84Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTK--SKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF
        MG SKKSQ+    + +GKK++ A    R SLKP+ TK     ++ ED    TPTA+ A+ PE   CP APRKR  +    N   +  F  P D E VF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTK--SKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVF

AT5G40460.1 unknown protein4.0e-2456.64Show/hide
Query:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAK------------DGEDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFF
        MGFSKKSQ +GG E++GKKWVIAG+  R SLKP+ TK +A             + E++   TPTAKE +IPE L CPPAPRKRR +LK RSN   +REFF
Subjt:  MGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAK------------DGEDDGEKTPTAKEARIPEKLGCPPAPRKRR-SLKSRSNQNHMREFF

Query:  NPP-DLESVFKLR
         PP DLE+VF  R
Subjt:  NPP-DLESVFKLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGATTTCAAATGGGATTCTCCAAAAAGTCCCAAATCGACGGCGGATTTGAAGCAGAGGGGAAAAAATGGGTAATCGCCGGCTTGCCGGCGAGGCCATCGTTGAA
GCCGATTAGCACGAAATCGAAGGCAAAAGACGGTGAAGACGATGGCGAGAAGACGCCGACAGCGAAAGAAGCTAGAATACCGGAGAAACTGGGTTGCCCGCCGGCGCCGA
GAAAGCGTAGATCTCTAAAATCAAGGTCTAATCAAAATCATATGAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTCAAGCTCCGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGATTTCAAATGGGATTCTCCAAAAAGTCCCAAATCGACGGCGGATTTGAAGCAGAGGGGAAAAAATGGGTAATCGCCGGCTTGCCGGCGAGGCCATCGTTGAA
GCCGATTAGCACGAAATCGAAGGCAAAAGACGGTGAAGACGATGGCGAGAAGACGCCGACAGCGAAAGAAGCTAGAATACCGGAGAAACTGGGTTGCCCGCCGGCGCCGA
GAAAGCGTAGATCTCTAAAATCAAGGTCTAATCAAAATCATATGAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTCAAGCTCCGAGTTTAA
Protein sequenceShow/hide protein sequence
MFGFQMGFSKKSQIDGGFEAEGKKWVIAGLPARPSLKPISTKSKAKDGEDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSRSNQNHMREFFNPPDLESVFKLRV