; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G015960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G015960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal RNA-processing protein 8
Genome locationchr02:21842345..21845809
RNA-Seq ExpressionLsi02G015960
SyntenyLsi02G015960
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0032259 - methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007823 - Ribosomal RNA processing protein 8
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR042036 - Ribosomal RNA-processing protein 8, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142786.1 ribosomal RNA-processing protein 8 [Cucumis sativus]3.9e-13582.2Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEG +++KRKRAKRRG +K+K STNNLPDATEP+ QDIVVSASSDGKK+ RVSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL               KDEKTSEGKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPC+YKRR
Subjt:  LKPCLYKRR

XP_008458812.1 PREDICTED: ribosomal RNA-processing protein 8 isoform X1 [Cucumis melo]3.5e-13682.85Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR++KKRKRAKRRG DKNKDST NLPDATE S QDIVVS+SSDGKK+QRVSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        +YHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGFVSAL               KDEKTSEGKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPCLYKRR
Subjt:  LKPCLYKRR

XP_008458813.1 PREDICTED: ribosomal RNA-processing protein 8 isoform X2 [Cucumis melo]3.4e-13987.07Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR++KKRKRAKRRG DKNKDST NLPDATE S QDIVVS+SSDGKK+QRVSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        +YHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTSEGKDIDWPQLKPCLYKRR
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGFVSALKDEKTSEGKDIDWPQLKPCLYKRR
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTSEGKDIDWPQLKPCLYKRR

XP_022938486.1 ribosomal RNA-processing protein 8-like [Cucurbita moschata]1.2e-13179.61Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR+ KKRKRAKRR +DKNKD TN++PDATEPSGQDIVVS SSDGKKS+R SGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYF ED+VLFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        VYHTGYQEQM HWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DS+SVDVAVFCLSLMGVNYASYL EARRVLKPRGWLLISEVKSRFDPSNGGADP +F++AVCELGFVSAL               KDEK S GKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPCLYKRR
Subjt:  LKPCLYKRR

XP_038889651.1 ribosomal RNA-processing protein 8 [Benincasa hispida]6.6e-13582.52Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR++KKRKRAKRRG++KNKDSTNNLPD T PS QDIVVS SSDG KSQ+VSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGF+SAL               KD+KTSEGKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPCLYKRR
Subjt:  LKPCLYKRR

TrEMBL top hitse value%identityAlignment
A0A0A0KUD5 Ribosomal RNA-processing protein 81.9e-13582.2Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEG +++KRKRAKRRG +K+K STNNLPDATEP+ QDIVVSASSDGKK+ RVSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL               KDEKTSEGKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPC+YKRR
Subjt:  LKPCLYKRR

A0A1S3C8Q8 Ribosomal RNA-processing protein 81.6e-13987.07Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR++KKRKRAKRRG DKNKDST NLPDATE S QDIVVS+SSDGKK+QRVSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        +YHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTSEGKDIDWPQLKPCLYKRR
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGFVSALKDEKTSEGKDIDWPQLKPCLYKRR
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTSEGKDIDWPQLKPCLYKRR

A0A1S3C8U7 Ribosomal RNA-processing protein 81.7e-13682.85Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR++KKRKRAKRRG DKNKDST NLPDATE S QDIVVS+SSDGKK+QRVSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        +YHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGFVSAL               KDEKTSEGKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPCLYKRR
Subjt:  LKPCLYKRR

A0A5A7T472 Ribosomal RNA-processing protein 81.7e-13682.85Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR++KKRKRAKRRG DKNKDST NLPDATE S QDIVVS+SSDGKK+QRVSGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        +YHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGFVSAL               KDEKTSEGKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPCLYKRR
Subjt:  LKPCLYKRR

A0A6J1FDA4 Ribosomal RNA-processing protein 85.6e-13279.61Show/hide
Query:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD
        MADEGR+ KKRKRAKRR +DKNKD TN++PDATEPSGQDIVVS SSDGKKS+R SGS+SFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYF ED+VLFD
Subjt:  MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFD

Query:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
        VYHTGYQEQM HWPELPVNLIIKWLKEHDPSFIVADFGC                          GDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL
Subjt:  VYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPL

Query:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ
        DS+SVDVAVFCLSLMGVNYASYL EARRVLKPRGWLLISEVKSRFDPSNGGADP +F++AVCELGFVSAL               KDEK S GKDIDWPQ
Subjt:  DSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSAL---------------KDEKTSEGKDIDWPQ

Query:  LKPCLYKRR
        LKPCLYKRR
Subjt:  LKPCLYKRR

SwissProt top hitse value%identityAlignment
O43159 Ribosomal RNA-processing protein 86.8e-4237Show/hide
Query:  RKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQM
        R R K +   KNK     +PD             S   +     + + +   +M  RL G  FR LNE+LY+     A   F+ED   F +YH G+Q Q+
Subjt:  RKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQM

Query:  THWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVF
          WP  PV+ I + L++   S +VADFGC                          GD RL+ +++N V  FDL S DP V  CDM+  PL+  SVDVAVF
Subjt:  THWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVF

Query:  CLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTSE---------GKDIDWP-------QLKPCLYKRR
        CLSLMG N   +L EA RVLKP G L ++EV SRF+      D + F++AV +LGF    KD   S          G  +  P       QL+PCLYKRR
Subjt:  CLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTSE---------GKDIDWP-------QLKPCLYKRR

O44410 Ribosomal RNA-processing protein 82.4e-3934.56Show/hide
Query:  KRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQMT
        K+ ++RG  K K        A E    D+  +                 + + + RL  G FR LNEKLYTCTG EA ++FKED   FD+YH G+ +Q+ 
Subjt:  KRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQMT

Query:  HWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNV--KNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAV
         WP  P+  II+WL+       V D GC                          G+A++++ V  K+K+ SFDLV+ +  V +CDMS  P + +S D+ +
Subjt:  HWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNV--KNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAV

Query:  FCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTS-----EGKDIDWPQ--------LKPCLYKRR
        +CLSLMG N   ++ EARRVLK  G L I+EV SRF         K+F +A+ ++GF  + + E T      E K ++  +        LKPCLYK+R
Subjt:  FCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTS-----EGKDIDWPQ--------LKPCLYKRR

Q5U4F0 Ribosomal RNA-processing protein 81.9e-3936.18Show/hide
Query:  RKRAKRRGADKNK----DSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGY
        R R K +   KNK    ++ + +P        ++  +  SD ++++    + +   +M  RL G  FR LNE+LY+     A   F+ED   F +YH G+
Subjt:  RKRAKRRGADKNK----DSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGY

Query:  QEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
        Q Q+  WP  PV+ I K L++   S +VADFGC                          GD RL+ +V+N V  FDL + DP V  CDM+  PL+  SVD
Subjt:  QEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD

Query:  VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD-----------EKTSEGK-----DIDWPQLKPCL
        VAVFCLSLMG N   +L EA RVLKP G L ++EV SRF+      D + F+ AV +LGF    KD           EKT   +      +   +L+PCL
Subjt:  VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD-----------EKTSEGK-----DIDWPQLKPCL

Query:  YKRR
        YK R
Subjt:  YKRR

Q84JC0 Ribosomal RNA-processing protein 83.2e-8453.8Show/hide
Query:  DEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGS---------TSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFK
        +E +T++ RKR ++R    +K+     P  T P  Q+     +    K+Q+  GS         ++FLD +R RLSGG FRMLNEKLYTC+G+EAL+YFK
Subjt:  DEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGS---------TSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFK

Query:  EDKVLFDVYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIAC
        ED  +FD+YHTGYQ+QM++WPELPVN II WL  +  S +VADFGC                          GDAR++K+VKNKVFSFDLVSK+PSVIAC
Subjt:  EDKVLFDVYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIAC

Query:  DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD---------------EKTSEG
        DMSNT L+S+SVDVAVFCLSLMG NY+SY+ EA RVL+P G LLI+EVKSRFDP+NGGADPK F+KAVC+LGF S LKD               +  S  
Subjt:  DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD---------------EKTSEG

Query:  KDIDWPQLKPCLYKRR
        K I WP+LK CLYKRR
Subjt:  KDIDWPQLKPCLYKRR

Q9DB85 Ribosomal RNA-processing protein 85.8e-4137.33Show/hide
Query:  RKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQM
        R R K +   KNK      P+   P             K   + S + +   +M  RL G  FR LNE+LY+     A   F+ED   F +YH G+Q Q+
Subjt:  RKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQM

Query:  THWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVF
          WP  PV+ I K L++   S +VADFGC                          GD RL+ +V+N V  FDL S DP V  CDM+  PL+  SVDVAVF
Subjt:  THWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVF

Query:  CLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD-----------EKTSEGK-----DIDWPQLKPCLYKRR
        CLSLMG N   +L EA RVLK  G L ++EV SRF+      D + F+ AV +LGF    KD           EKT   +      +   +L+PCLYKRR
Subjt:  CLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD-----------EKTSEGK-----DIDWPQLKPCLYKRR

Arabidopsis top hitse value%identityAlignment
AT5G40530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein2.3e-8553.8Show/hide
Query:  DEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGS---------TSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFK
        +E +T++ RKR ++R    +K+     P  T P  Q+     +    K+Q+  GS         ++FLD +R RLSGG FRMLNEKLYTC+G+EAL+YFK
Subjt:  DEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGS---------TSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFK

Query:  EDKVLFDVYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIAC
        ED  +FD+YHTGYQ+QM++WPELPVN II WL  +  S +VADFGC                          GDAR++K+VKNKVFSFDLVSK+PSVIAC
Subjt:  EDKVLFDVYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIAC

Query:  DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD---------------EKTSEG
        DMSNT L+S+SVDVAVFCLSLMG NY+SY+ EA RVL+P G LLI+EVKSRFDP+NGGADPK F+KAVC+LGF S LKD               +  S  
Subjt:  DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKD---------------EKTSEG

Query:  KDIDWPQLKPCLYKRR
        K I WP+LK CLYKRR
Subjt:  KDIDWPQLKPCLYKRR

AT5G40530.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein3.2e-7956.12Show/hide
Query:  DEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGS---------TSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFK
        +E +T++ RKR ++R    +K+     P  T P  Q+     +    K+Q+  GS         ++FLD +R RLSGG FRMLNEKLYTC+G+EAL+YFK
Subjt:  DEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGS---------TSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFK

Query:  EDKVLFDVYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIAC
        ED  +FD+YHTGYQ+QM++WPELPVN II WL  +  S +VADFGC                          GDAR++K+VKNKVFSFDLVSK+PSVIAC
Subjt:  EDKVLFDVYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIAC

Query:  DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALK
        DMSNT L+S+SVDVAVFCLSLMG NY+SY+ EA RVL+P G LLI+EVKSRFDP+NGGADPK F+KAVC+LGF S LK
Subjt:  DMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGAAGGCCGCACAACCAAGAAGCGGAAGAGGGCGAAGCGTCGTGGAGCGGACAAAAACAAAGATTCTACCAATAATCTACCGGATGCTACTGAGCCCAGTGG
CCAAGACATCGTTGTTTCTGCTTCTTCCGACGGCAAAAAATCTCAGAGGGTTTCCGGCTCGACTAGTTTCCTCGATAAGATGCGAGCTCGTTTGTCAGGAGGGCATTTCA
GGATGCTTAATGAGAAGTTGTATACCTGCACAGGGGAAGAGGCGCTTAATTATTTCAAAGAAGACAAGGTTCTGTTTGATGTGTATCATACAGGATACCAAGAGCAAATG
ACGCATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTCAAGGAGCACGATCCCTCGTTTATTGTGGCTGATTTTGGCTGTGTATTTGACACTTTTAAGGACCT
TCATTCTTATTTTGTCATTTTTCTCCTCTTTTTTTCCCCTTCAAATTTAATTACAGGGGATGCACGCCTTTCAAAGAATGTGAAGAATAAAGTTTTCTCATTTGATCTGG
TTTCCAAAGATCCTTCTGTCATTGCCTGTGATATGTCAAATACACCTCTTGACTCTGCATCTGTGGATGTTGCTGTCTTTTGCCTTTCACTTATGGGGGTCAATTATGCA
AGTTACTTGGCAGAAGCACGAAGAGTACTTAAACCACGTGGATGGCTTTTAATATCAGAAGTCAAAAGCAGATTTGACCCAAGCAATGGAGGAGCCGACCCCAAAAAATT
TATAAAGGCTGTTTGTGAGCTAGGTTTCGTCTCAGCTTTGAAGGATGAGAAAACTTCTGAGGGGAAAGATATTGATTGGCCCCAACTAAAACCTTGTCTGTATAAACGTC
GCTGA
mRNA sequenceShow/hide mRNA sequence
CTAAAATCCCAATTCCCACACCAACGATCGCCCTAGTTCCATTCTGCTTCGTCTCTGCTCTACTCTTTTTCAGCTCGTCTTCTCCCAACGCGAATTGTTTCATCAAGGTT
TCCTAGCAAAAAACAACAATGGCGGACGAAGGCCGCACAACCAAGAAGCGGAAGAGGGCGAAGCGTCGTGGAGCGGACAAAAACAAAGATTCTACCAATAATCTACCGGA
TGCTACTGAGCCCAGTGGCCAAGACATCGTTGTTTCTGCTTCTTCCGACGGCAAAAAATCTCAGAGGGTTTCCGGCTCGACTAGTTTCCTCGATAAGATGCGAGCTCGTT
TGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACCTGCACAGGGGAAGAGGCGCTTAATTATTTCAAAGAAGACAAGGTTCTGTTTGATGTGTATCATACA
GGATACCAAGAGCAAATGACGCATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTCAAGGAGCACGATCCCTCGTTTATTGTGGCTGATTTTGGCTGTGTATT
TGACACTTTTAAGGACCTTCATTCTTATTTTGTCATTTTTCTCCTCTTTTTTTCCCCTTCAAATTTAATTACAGGGGATGCACGCCTTTCAAAGAATGTGAAGAATAAAG
TTTTCTCATTTGATCTGGTTTCCAAAGATCCTTCTGTCATTGCCTGTGATATGTCAAATACACCTCTTGACTCTGCATCTGTGGATGTTGCTGTCTTTTGCCTTTCACTT
ATGGGGGTCAATTATGCAAGTTACTTGGCAGAAGCACGAAGAGTACTTAAACCACGTGGATGGCTTTTAATATCAGAAGTCAAAAGCAGATTTGACCCAAGCAATGGAGG
AGCCGACCCCAAAAAATTTATAAAGGCTGTTTGTGAGCTAGGTTTCGTCTCAGCTTTGAAGGATGAGAAAACTTCTGAGGGGAAAGATATTGATTGGCCCCAACTAAAAC
CTTGTCTGTATAAACGTCGCTGAGTTGAGTTTGCATTTTTTTTTCTCCTTTTGTAGTTTTGTTATGTTAAAATAAACTCCTATACAAGCACTTGCTATTAGCTTCTTTCT
ATGTTATATAATCTTATTGGAAATCATTTTGTAGTTCATTGATGTTGTCAAATGAAATGTTGGGTTTAGTTGAGCAATTACTGAAGTCTGAAGCTTTCTTG
Protein sequenceShow/hide protein sequence
MADEGRTTKKRKRAKRRGADKNKDSTNNLPDATEPSGQDIVVSASSDGKKSQRVSGSTSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQM
THWPELPVNLIIKWLKEHDPSFIVADFGCVFDTFKDLHSYFVIFLLFFSPSNLITGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVFCLSLMGVNYA
SYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDEKTSEGKDIDWPQLKPCLYKRR