; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G016000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G016000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCRM domain-containing protein
Genome locationchr02:21862131..21866418
RNA-Seq ExpressionLsi02G016000
SyntenyLsi02G016000
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142845.1 CRM-domain containing factor CFM9, mitochondrial isoform X1 [Cucumis sativus]1.3e-24878.06Show/hide
Query:  MLAATRRLC-FSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
        MLAATRR C FSRVS LLLSNRYN+VI  TD +SE  SCNV HRSIHG Y+LPSTSKVVGPFNGL RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
Subjt:  MLAATRRLC-FSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK

Query:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------
        KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRN+NYVPVGVRGVFGGVVQNMHLHWKFHET        
Subjt:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------

Query:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
                                                             ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Subjt:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST

Query:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD
        FFNAIDKKEGTPYVF+ DKQ V E  TKTKTNMEE ES+SDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQ+RYRNREEHGGRF+K DMRTNN+SD
Subjt:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD

Query:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL
        +EMDKPRVWRQRDSKQRLY+SEEEDGDHENEEEWDSDDGQNANNS+TDDSDGA+ IVK TRRA GRHDLAK +SFERNV+P       EASEPENMLSDL
Subjt:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL

Query:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE
        E+ MWQSDEEEEDD K+S+  + DYK NED LH +K+++NNR NDYDSSIDEPD++Y++ KHT TKQKQDRMSKSK+ YN VSKD DSGKAMWDSDDEDE
Subjt:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE

Query:  SGTSRPQRYDYWSGSKEDDS
         GT RPQRYDYWSGS ED S
Subjt:  SGTSRPQRYDYWSGSKEDDS

XP_008458822.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis melo]2.9e-24078.74Show/hide
Query:  MLAATRRL-CFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
        MLAATRRL CFSRVS LLLSNRYNNVI LTD +SE   CNVAHR IHG Y+LPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
Subjt:  MLAATRRL-CFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK

Query:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------
        KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLT EQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET        
Subjt:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------

Query:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
                                                             ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Subjt:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST

Query:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD
        FFNAIDKKEGTPYVF+GDKQ VTE  TKTKTNMEE ESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRF+K DMR    SD
Subjt:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD

Query:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL
        +EMDKPRVWRQRDSKQRLY+SEEEDGDHENEEEWDSDDGQNANNS+TDDSDGA+ I+K TRR  GRHDLAK KSFERNV+P       E SEPENMLSDL
Subjt:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL

Query:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE
        ESAMWQSDEEEEDD  +SR  + DYKHNED LH +K+++NNR NDYDSS+DEPD+AYD+ KHT TKQKQDRMSKSK+SYN VS+D DS KAMWDSDDEDE
Subjt:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE

Query:  SG
         G
Subjt:  SG

XP_011655392.1 CRM-domain containing factor CFM9, mitochondrial isoform X2 [Cucumis sativus]1.9e-24777.9Show/hide
Query:  MLAATRRLC-FSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
        MLAATRR C FSRVS LLLSNRYN ++S TD +SE  SCNV HRSIHG Y+LPSTSKVVGPFNGL RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
Subjt:  MLAATRRLC-FSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK

Query:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------
        KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRN+NYVPVGVRGVFGGVVQNMHLHWKFHET        
Subjt:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------

Query:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
                                                             ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Subjt:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST

Query:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD
        FFNAIDKKEGTPYVF+ DKQ V E  TKTKTNMEE ES+SDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQ+RYRNREEHGGRF+K DMRTNN+SD
Subjt:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD

Query:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL
        +EMDKPRVWRQRDSKQRLY+SEEEDGDHENEEEWDSDDGQNANNS+TDDSDGA+ IVK TRRA GRHDLAK +SFERNV+P       EASEPENMLSDL
Subjt:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL

Query:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE
        E+ MWQSDEEEEDD K+S+  + DYK NED LH +K+++NNR NDYDSSIDEPD++Y++ KHT TKQKQDRMSKSK+ YN VSKD DSGKAMWDSDDEDE
Subjt:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE

Query:  SGTSRPQRYDYWSGSKEDDS
         GT RPQRYDYWSGS ED S
Subjt:  SGTSRPQRYDYWSGSKEDDS

XP_022990655.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]1.7e-23775.12Show/hide
Query:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK
        M +ATRRLCF+RVSTLLLSNRYNNV+SL DFHSE+AS NVA RSI   Y+LPS SKVVG +NGL RCMSTS+GRSMRSKVERRMRKESGKTLREIRRAKK
Subjt:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK

Query:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------
        IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET         
Subjt:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------

Query:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
                                                            ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
Subjt:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF

Query:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN
        FNAIDKKEGTPYVF+GDKQ VTE     + NMEEEES+SDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGR +K DMRTNN+SD+
Subjt:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN

Query:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANN--SHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLS
        E++KP VWRQRDSKQRLY+SEEED +H NEEEWDSDDGQNANN  S++DDSDGA+GI+K TR A GRHDLAKN+SF+RNVEP        E SEPE MLS
Subjt:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANN--SHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLS

Query:  DLESAMWQSDEE---EEDDTKVSRYANHDYKHNEDDLHSIKRN-QNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWD
        DLESAMWQS+EE   EEDD KV   AN DY+ NEDDLH IK++ +NN+ NDYDSSIDE ++AYDR +H DTK+K++RM KSKNSYN VSK+ DSGKA+WD
Subjt:  DLESAMWQSDEE---EEDDTKVSRYANHDYKHNEDDLHSIKRN-QNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWD

Query:  SDDEDESGTSRPQRYDYWSGSKEDDSR
        SD+EDESGTSRPQR+DYWSGS EDDSR
Subjt:  SDDEDESGTSRPQRYDYWSGSKEDDSR

XP_038890903.1 CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida]6.8e-26682.29Show/hide
Query:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK
        MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHG YILPSTSKVVGPFNG FRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK
Subjt:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK

Query:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------
        IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET         
Subjt:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------

Query:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
                                                            ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
Subjt:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF

Query:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN
        FNAIDKKEGTPYVF+GDKQ VTETKTKTKTNMEE ESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRF+K DMRTNNNSD+
Subjt:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN

Query:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLSDL
        EMDKPRVWRQRDSKQR+YDSEEEDGDHEN+EEWDSDD QNANNS+TDDSDGA+GI KVT+R  GRHDLAKNKSFERNVEP        EASEPENMLSDL
Subjt:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLSDL

Query:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE
        ESAMWQSDEEEEDD  VSRY NHDYKHN++DLH IK+++N+R+NDYDSS D+ DDAYDR KH DTKQKQDRMSKSKNS N VSK+ DSGKAMWDSDDEDE
Subjt:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE

Query:  SGTSRPQRYDYWSGSKEDDSR
        SGTSRPQRYDY SGS+ED  R
Subjt:  SGTSRPQRYDYWSGSKEDDSR

TrEMBL top hitse value%identityAlignment
A0A0A0KSD9 CRM domain-containing protein6.2e-24978.06Show/hide
Query:  MLAATRRLC-FSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
        MLAATRR C FSRVS LLLSNRYN+VI  TD +SE  SCNV HRSIHG Y+LPSTSKVVGPFNGL RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
Subjt:  MLAATRRLC-FSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK

Query:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------
        KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRN+NYVPVGVRGVFGGVVQNMHLHWKFHET        
Subjt:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------

Query:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
                                                             ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Subjt:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST

Query:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD
        FFNAIDKKEGTPYVF+ DKQ V E  TKTKTNMEE ES+SDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQ+RYRNREEHGGRF+K DMRTNN+SD
Subjt:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD

Query:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL
        +EMDKPRVWRQRDSKQRLY+SEEEDGDHENEEEWDSDDGQNANNS+TDDSDGA+ IVK TRRA GRHDLAK +SFERNV+P       EASEPENMLSDL
Subjt:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL

Query:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE
        E+ MWQSDEEEEDD K+S+  + DYK NED LH +K+++NNR NDYDSSIDEPD++Y++ KHT TKQKQDRMSKSK+ YN VSKD DSGKAMWDSDDEDE
Subjt:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE

Query:  SGTSRPQRYDYWSGSKEDDS
         GT RPQRYDYWSGS ED S
Subjt:  SGTSRPQRYDYWSGSKEDDS

A0A1S3C9B5 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.4e-24078.74Show/hide
Query:  MLAATRRL-CFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
        MLAATRRL CFSRVS LLLSNRYNNVI LTD +SE   CNVAHR IHG Y+LPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK
Subjt:  MLAATRRL-CFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAK

Query:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------
        KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLT EQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET        
Subjt:  KIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET--------

Query:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
                                                             ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Subjt:  -----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST

Query:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD
        FFNAIDKKEGTPYVF+GDKQ VTE  TKTKTNMEE ESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRF+K DMR    SD
Subjt:  FFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSD

Query:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL
        +EMDKPRVWRQRDSKQRLY+SEEEDGDHENEEEWDSDDGQNANNS+TDDSDGA+ I+K TRR  GRHDLAK KSFERNV+P       E SEPENMLSDL
Subjt:  NEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL------EASEPENMLSDL

Query:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE
        ESAMWQSDEEEEDD  +SR  + DYKHNED LH +K+++NNR NDYDSS+DEPD+AYD+ KHT TKQKQDRMSKSK+SYN VS+D DS KAMWDSDDEDE
Subjt:  ESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDE

Query:  SG
         G
Subjt:  SG

A0A6J1BYA8 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.4e-23275.24Show/hide
Query:  AATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVA-SCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKI
        A  RRL  +RVSTLLLSNR+NNV+SLTDFHS+VA SCNVAHRSI G Y+LP T+ VVGPFNG+ RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKI
Subjt:  AATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVA-SCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKI

Query:  KKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET----------
        KKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELP PRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET          
Subjt:  KKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET----------

Query:  ---------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFF
                                                           ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFF
Subjt:  ---------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFF

Query:  NAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNE
        NAIDKKEGTPYVF+GDKQ    T T +K NM E ESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRF++ DMRTN++S+NE
Subjt:  NAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNE

Query:  MDKPRVWRQRDSKQRLYDSEEEDG-DHENEEEWDSDDGQNANN--SHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVE--------PLEASEPENML
        M+KPRVWRQRDSKQRL+DSEEED  DHENEEEWDSDDG+NANN  S TDDSDGA+GIVK TR ARGRHDLAKNKSF+R+V+          EASEPENML
Subjt:  MDKPRVWRQRDSKQRLYDSEEEDG-DHENEEEWDSDDGQNANN--SHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVE--------PLEASEPENML

Query:  SDLESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDD
        SDLESAMW+SDEEEEDD KVSRY + DYK  EDDLH  K ++NNRLNDYDS++DE D+AYDR +H DTKQKQ RM   KNSYN    DV+SG AMWDSDD
Subjt:  SDLESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDD

Query:  EDESGTSRPQRYDYWSGSKEDD
        E+ESG SR QRYDYWSGS EDD
Subjt:  EDESGTSRPQRYDYWSGSKEDD

A0A6J1HHB1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.5e-23475.04Show/hide
Query:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK
        M +ATRRLCF+RVSTLLLSNRYNNV+SL DFHSE+AS NVA RSI   Y+ PS  KVVG FNGL RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK
Subjt:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK

Query:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------
        IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET         
Subjt:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------

Query:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
                                                            ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
Subjt:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF

Query:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN
        FNAIDKKEGTPYVF+GDKQ    T T+ + NMEEEES+SDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGR +K DMRTNN+SD+
Subjt:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN

Query:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLSDL
        E++KP VWRQRDSKQRLYDSEEED +H NEEEWDSDDGQNAN++  DDSDGA+GIVK TR A GRHDLAKN+SF+RNVEP        E SEPE MLSDL
Subjt:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLSDL

Query:  ESAMWQSDEE---EEDDTKVSRYANHDYKHNEDDLHSIKRN-QNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSD
        ESAMWQS+EE   EEDD KV   AN DY+ NE DLH IK++ +NN+LNDYDSSIDE ++AY+   HTDTK+K++RM KSKNSYN VSK+ DSGKA+WDSD
Subjt:  ESAMWQSDEE---EEDDTKVSRYANHDYKHNEDDLHSIKRN-QNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSD

Query:  DEDESGTSRPQRYDYWSGSKEDDSR
        +EDESGTSRPQR+DYWSGS EDDSR
Subjt:  DEDESGTSRPQRYDYWSGSKEDDSR

A0A6J1JQP1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic8.4e-23875.12Show/hide
Query:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK
        M +ATRRLCF+RVSTLLLSNRYNNV+SL DFHSE+AS NVA RSI   Y+LPS SKVVG +NGL RCMSTS+GRSMRSKVERRMRKESGKTLREIRRAKK
Subjt:  MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKK

Query:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------
        IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET         
Subjt:  IKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHET---------

Query:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
                                                            ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
Subjt:  ----------------------------------------------------ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF

Query:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN
        FNAIDKKEGTPYVF+GDKQ VTE     + NMEEEES+SDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGR +K DMRTNN+SD+
Subjt:  FNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDN

Query:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANN--SHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLS
        E++KP VWRQRDSKQRLY+SEEED +H NEEEWDSDDGQNANN  S++DDSDGA+GI+K TR A GRHDLAKN+SF+RNVEP        E SEPE MLS
Subjt:  EMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANN--SHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPL-------EASEPENMLS

Query:  DLESAMWQSDEE---EEDDTKVSRYANHDYKHNEDDLHSIKRN-QNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWD
        DLESAMWQS+EE   EEDD KV   AN DY+ NEDDLH IK++ +NN+ NDYDSSIDE ++AYDR +H DTK+K++RM KSKNSYN VSK+ DSGKA+WD
Subjt:  DLESAMWQSDEE---EEDDTKVSRYANHDYKHNEDDLHSIKRN-QNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWD

Query:  SDDEDESGTSRPQRYDYWSGSKEDDSR
        SD+EDESGTSRPQR+DYWSGS EDDSR
Subjt:  SDDEDESGTSRPQRYDYWSGSKEDDSR

SwissProt top hitse value%identityAlignment
F4J2U9 CRM-domain containing factor CFM3A, chloroplastic/mitochondrial2.7e-0735.24Show/hide
Query:  KESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLH
        K+  + LR     +K+++KL   E +LL   +R   KV + L+  ++         R DPE +T E+   ++K+G + K ++ +G RGVF G V+NMHLH
Subjt:  KESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLH

Query:  WKFHE
        WK+ E
Subjt:  WKFHE

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic8.4e-0926.32Show/hide
Query:  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKN
        S+S+     +K++R+  K     +R ++  +  KKK    MT EE++L  L++A+KK   L++ +KK E  E     HDPE+LTPE+   Y K+G + KN
Subjt:  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKN

Query:  YVPVGVRGVFGGVVQNMHLHWKFHETALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIV---TE
        YVPVG RG++ GV+ NMHLHWK H+T                       ++  K   P D V   +++    T    +D  EG   + +  K  V   TE
Subjt:  YVPVGVRGVFGGVVQNMHLHWKFHETALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIV---TE

Query:  TKTKTKTNMEEEESNSDSDQEEL---DRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRL---
          +   T   ++  +    ++ L    ++I  +E   +   +  +A  K + + ++  + +E     KK   R+    ++E ++     +  +   L   
Subjt:  TKTKTKTNMEEEESNSDSDQEEL---DRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRL---

Query:  --YDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVK
           DSE ED   E     +  +   A N+  D+  G  G  K
Subjt:  --YDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVK

Q9LT57 CRM-domain containing factor CFM9, mitochondrial4.6e-10049.7Show/hide
Query:  FNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIG
        F G  R MSTS+GRSMRSKVE RMRKESGKTLREIRRAKK+KKKLMT+EERL+YNLKRAKKKVALLLQ+LKKY+LPELP P HDPEL T EQ+QA+KKIG
Subjt:  FNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIG

Query:  FRNKNYVPVGVRGVFGGVVQNMHLHWKFHET-------------------------------------------------------------ALFKARFE
        F+NKNYVPVGVRGVFGGVVQNMH+HWKFHET                                                             ALFKARFE
Subjt:  FRNKNYVPVGVRGVFGGVVQNMHLHWKFHET-------------------------------------------------------------ALFKARFE

Query:  QALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRD
        QAL+SQKLNIKK EQ+LRR G+NPEDPVAMASI RVASTFFNAIDKKEGTPYVFHGDKQ  +E  T      E E  + DSDQEELDRFIAEIE+AAD++
Subjt:  QALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRD

Query:  WVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTR
        W  EEAAE+EE  +IRY NREE  GR +  ++R+  ++ +     R  R   S++R  DS+++D D E + E D +  +  + + + +          T 
Subjt:  WVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTR

Query:  RARGRHDLAKNKSFERNVEPLEASEPENMLSDLESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQ
          R R D  +     R     +    +++LSDL++ MW S E+EED    +  ++ D   +E+   S   ++ +R  +  S      D  + SK    KQ
Subjt:  RARGRHDLAKNKSFERNVEPLEASEPENMLSDLESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQ

Query:  KQD
        + +
Subjt:  KQD

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.6e-1844.26Show/hide
Query:  TSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPV
        T K   ++ K ER  R  + +        K  KKK +  EER+ Y L++AK K ALL+++LK+YE+ ++  P   P  +T E+    KK+G +  NYVP+
Subjt:  TSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPV

Query:  GVRGVFGGVVQNMHLHWKFHET
        G RGVFGGV+ NMHLHWK HET
Subjt:  GVRGVFGGVVQNMHLHWKFHET

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein6.0e-1026.32Show/hide
Query:  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKN
        S+S+     +K++R+  K     +R ++  +  KKK    MT EE++L  L++A+KK   L++ +KK E  E     HDPE+LTPE+   Y K+G + KN
Subjt:  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKN

Query:  YVPVGVRGVFGGVVQNMHLHWKFHETALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIV---TE
        YVPVG RG++ GV+ NMHLHWK H+T                       ++  K   P D V   +++    T    +D  EG   + +  K  V   TE
Subjt:  YVPVGVRGVFGGVVQNMHLHWKFHETALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIV---TE

Query:  TKTKTKTNMEEEESNSDSDQEEL---DRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRL---
          +   T   ++  +    ++ L    ++I  +E   +   +  +A  K + + ++  + +E     KK   R+    ++E ++     +  +   L   
Subjt:  TKTKTKTNMEEEESNSDSDQEEL---DRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRL---

Query:  --YDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVK
           DSE ED   E     +  +   A N+  D+  G  G  K
Subjt:  --YDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVK

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein1.2e-1026.01Show/hide
Query:  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKN
        S+S+     +K++R+  K     +R ++  +  KKK    MT EE++L  L++A+KK   L++ +KK E  E     HDPE+LTPE+   Y K+G + KN
Subjt:  STSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKK---LMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKN

Query:  YVPVGVRGVFGGVVQNMHLHWKFHETALFKARF-------EQALDSQK------LNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDK-------
        YVPVG RG++ GV+ NMHLHWK H+T     +        E A++  +      L++ +    +  +G N   P       R+      A+DK       
Subjt:  YVPVGVRGVFGGVVQNMHLHWKFHETALFKARF-------EQALDSQK------LNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDK-------

Query:  ---KEGTPYVFHGDKQIVTETKTK---TKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGR---------FKKFD
           ++  P +    + +  + +TK   T   +++ +  S+  ++ ++R    +ED  + D    E A   +LS I   + E    +         F+KF 
Subjt:  ---KEGTPYVFHGDKQIVTETKTK---TKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGR---------FKKFD

Query:  MRTNNNSDNEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDD
           N   ++  D  +             SE E+ D +    +D  D
Subjt:  MRTNNNSDNEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDD

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein3.3e-10149.7Show/hide
Query:  FNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIG
        F G  R MSTS+GRSMRSKVE RMRKESGKTLREIRRAKK+KKKLMT+EERL+YNLKRAKKKVALLLQ+LKKY+LPELP P HDPEL T EQ+QA+KKIG
Subjt:  FNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIG

Query:  FRNKNYVPVGVRGVFGGVVQNMHLHWKFHET-------------------------------------------------------------ALFKARFE
        F+NKNYVPVGVRGVFGGVVQNMH+HWKFHET                                                             ALFKARFE
Subjt:  FRNKNYVPVGVRGVFGGVVQNMHLHWKFHET-------------------------------------------------------------ALFKARFE

Query:  QALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRD
        QAL+SQKLNIKK EQ+LRR G+NPEDPVAMASI RVASTFFNAIDKKEGTPYVFHGDKQ  +E  T      E E  + DSDQEELDRFIAEIE+AAD++
Subjt:  QALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRD

Query:  WVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTR
        W  EEAAE+EE  +IRY NREE  GR +  ++R+  ++ +     R  R   S++R  DS+++D D E + E D +  +  + + + +          T 
Subjt:  WVAEEAAEKEELSQIRYRNREEHGGRFKKFDMRTNNNSDNEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTR

Query:  RARGRHDLAKNKSFERNVEPLEASEPENMLSDLESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQ
          R R D  +     R     +    +++LSDL++ MW S E+EED    +  ++ D   +E+   S   ++ +R  +  S      D  + SK    KQ
Subjt:  RARGRHDLAKNKSFERNVEPLEASEPENMLSDLESAMWQSDEEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQ

Query:  KQD
        + +
Subjt:  KQD

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein5.0e-1746.73Show/hide
Query:  RKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHL
        RK     LR  R   K K      E R+ Y L++AK+K   L+++L+KY++P+ P   +DPE LT E+    K+ G + KN+V VG RGVFGGVV N+HL
Subjt:  RKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHL

Query:  HWKFHET
        HWK HET
Subjt:  HWKFHET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCCGCTACTCGAAGACTCTGTTTCAGTAGGGTTTCCACTCTCCTCCTATCCAATCGCTACAACAATGTCATATCATTAACAGATTTTCATTCAGAGGTTGCTTC
ATGCAATGTGGCCCATAGAAGTATTCATGGTGTATATATACTGCCTTCTACATCTAAGGTGGTTGGTCCTTTCAATGGGTTGTTCCGTTGTATGTCAACATCGAAGGGAA
GGAGTATGCGAAGTAAGGTGGAGAGGAGAATGAGGAAGGAGTCTGGTAAAACCTTAAGGGAGATCCGAAGAGCTAAGAAAATAAAGAAAAAGTTGATGACAGAGGAAGAA
CGGCTCCTTTACAACCTCAAAAGAGCCAAGAAGAAAGTAGCATTACTTTTGCAACAACTCAAGAAGTATGAACTACCAGAGTTGCCTCCCCCTCGTCATGACCCTGAGCT
CTTGACCCCTGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAAAATTACGTCCCAGTTGGAGTTCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATC
TTCACTGGAAGTTTCACGAGACGGCATTATTCAAGGCCAGATTTGAACAGGCTCTCGACTCTCAGAAGCTAAACATAAAGAAGATAGAACAAGAGCTCAGGCGTAAGGGT
ATCAACCCGGAGGATCCAGTTGCTATGGCCAGCATTCAGAGAGTAGCTTCAACATTTTTTAACGCCATTGACAAAAAAGAAGGTACCCCATATGTCTTCCATGGTGATAA
GCAGATAGTGACAGAGACCAAGACCAAGACCAAGACTAACATGGAAGAAGAGGAATCTAATAGTGACAGTGACCAGGAAGAGTTAGACCGATTCATAGCTGAGATCGAGG
ATGCAGCAGACCGAGATTGGGTTGCTGAGGAAGCGGCAGAGAAAGAAGAACTTAGCCAAATTAGGTATAGGAATAGAGAAGAACATGGTGGGAGATTCAAAAAATTCGAT
ATGCGTACAAATAACAATTCCGACAACGAGATGGATAAGCCAAGAGTTTGGAGGCAGAGAGATAGTAAGCAAAGATTGTACGATAGTGAAGAGGAAGATGGTGATCATGA
AAATGAGGAGGAATGGGATTCTGATGATGGTCAGAATGCTAATAATAGCCATACAGATGATTCTGATGGAGCTTATGGGATTGTCAAGGTGACTCGAAGAGCCAGAGGGA
GGCATGATTTGGCCAAAAATAAAAGTTTTGAGAGAAATGTTGAGCCCTTGGAAGCTTCTGAGCCTGAAAACATGCTCAGTGATCTTGAAAGTGCTATGTGGCAATCAGAC
GAGGAGGAAGAAGATGACACAAAAGTTTCAAGGTACGCGAATCATGATTACAAGCACAATGAAGATGATTTGCATTCCATCAAGAGAAATCAGAATAATAGGCTCAATGA
CTATGACAGTAGCATCGATGAACCTGATGATGCATACGATAGGTCTAAGCACACTGACACTAAACAAAAGCAGGATAGAATGAGCAAATCCAAAAACAGTTACAACTTGG
TCTCAAAAGATGTTGATTCAGGAAAAGCAATGTGGGATTCAGATGATGAAGATGAATCGGGGACATCGAGACCCCAGAGATACGACTACTGGAGTGGTAGTAAGGAAGAT
GATTCTCGTTGA
mRNA sequenceShow/hide mRNA sequence
GATGTGTTTTAGTGGGCGAAAAAAAGAAAAGAAAGGAAGGGCAAAGAATGGACGCTAAACCCTGCAGCCTGCAATCGCAAAACCCTTACCGGTCGGCGTTGGTAACTTGG
GAATGGAGATGAGTGTTTGATCCATCCACATCTCTTTCCTTAATCCATTCATCAATGTTAGCCGCTACTCGAAGACTCTGTTTCAGTAGGGTTTCCACTCTCCTCCTATC
CAATCGCTACAACAATGTCATATCATTAACAGATTTTCATTCAGAGGTTGCTTCATGCAATGTGGCCCATAGAAGTATTCATGGTGTATATATACTGCCTTCTACATCTA
AGGTGGTTGGTCCTTTCAATGGGTTGTTCCGTTGTATGTCAACATCGAAGGGAAGGAGTATGCGAAGTAAGGTGGAGAGGAGAATGAGGAAGGAGTCTGGTAAAACCTTA
AGGGAGATCCGAAGAGCTAAGAAAATAAAGAAAAAGTTGATGACAGAGGAAGAACGGCTCCTTTACAACCTCAAAAGAGCCAAGAAGAAAGTAGCATTACTTTTGCAACA
ACTCAAGAAGTATGAACTACCAGAGTTGCCTCCCCCTCGTCATGACCCTGAGCTCTTGACCCCTGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAAAATT
ACGTCCCAGTTGGAGTTCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATCTTCACTGGAAGTTTCACGAGACGGCATTATTCAAGGCCAGATTTGAACAGGCTCTC
GACTCTCAGAAGCTAAACATAAAGAAGATAGAACAAGAGCTCAGGCGTAAGGGTATCAACCCGGAGGATCCAGTTGCTATGGCCAGCATTCAGAGAGTAGCTTCAACATT
TTTTAACGCCATTGACAAAAAAGAAGGTACCCCATATGTCTTCCATGGTGATAAGCAGATAGTGACAGAGACCAAGACCAAGACCAAGACTAACATGGAAGAAGAGGAAT
CTAATAGTGACAGTGACCAGGAAGAGTTAGACCGATTCATAGCTGAGATCGAGGATGCAGCAGACCGAGATTGGGTTGCTGAGGAAGCGGCAGAGAAAGAAGAACTTAGC
CAAATTAGGTATAGGAATAGAGAAGAACATGGTGGGAGATTCAAAAAATTCGATATGCGTACAAATAACAATTCCGACAACGAGATGGATAAGCCAAGAGTTTGGAGGCA
GAGAGATAGTAAGCAAAGATTGTACGATAGTGAAGAGGAAGATGGTGATCATGAAAATGAGGAGGAATGGGATTCTGATGATGGTCAGAATGCTAATAATAGCCATACAG
ATGATTCTGATGGAGCTTATGGGATTGTCAAGGTGACTCGAAGAGCCAGAGGGAGGCATGATTTGGCCAAAAATAAAAGTTTTGAGAGAAATGTTGAGCCCTTGGAAGCT
TCTGAGCCTGAAAACATGCTCAGTGATCTTGAAAGTGCTATGTGGCAATCAGACGAGGAGGAAGAAGATGACACAAAAGTTTCAAGGTACGCGAATCATGATTACAAGCA
CAATGAAGATGATTTGCATTCCATCAAGAGAAATCAGAATAATAGGCTCAATGACTATGACAGTAGCATCGATGAACCTGATGATGCATACGATAGGTCTAAGCACACTG
ACACTAAACAAAAGCAGGATAGAATGAGCAAATCCAAAAACAGTTACAACTTGGTCTCAAAAGATGTTGATTCAGGAAAAGCAATGTGGGATTCAGATGATGAAGATGAA
TCGGGGACATCGAGACCCCAGAGATACGACTACTGGAGTGGTAGTAAGGAAGATGATTCTCGTTGAAAGAAGATAAATAAACAGTGAAATGGATGAAATTTATGGGAAAA
AAGAATGGCTGAAAACTTGGTGCAACAATCTTCAGTTGCTTCAATGCACTGCCTGATTGTGTGTGAGAGGAGAGGCAGGGAGAGAGGCAATTTTTGTCATCTGAAAAAAT
ATCGCTTCAACGTTCAAAGCTTAGCACCACGGTATTACTGCTGGTAAAATTCTACCTTTTACAAGAGAAGAGGAAGTGAAAAATAGCCATAGATAGAGCTGAAAATGGAC
CAGAGAAGCCATCCTAGTCTCATAGAATTAAGCTTGAAATGGAGAACTTTAAGAATCCAAAATCAAAGAGAGAAAAATGGTGCTTGAAGGATGAGATTTCTTAATCTAGT
CATGGTCAGAATGTTTGTGGTTTGTGTTTACTCTCGGTAATTTTTTTAATTTGCATTTCCAGCCTTTTTGTAAGCTTATGGACAATTTTTTTTTCTTCAGTTATTTTCCT
TCTAAAGGTAAAGGTATGTTTGAAAGTGGCACGTGAGTAAAGGTAAATTGGCATGAATATGTATGACGATTATCAACCTCAAAATTTGAGGTTCGATCCCTCACTCCACA
TCTTGAGGAAAAAAAAGTATGTTTGAAAGTGATTGGAGT
Protein sequenceShow/hide protein sequence
MLAATRRLCFSRVSTLLLSNRYNNVISLTDFHSEVASCNVAHRSIHGVYILPSTSKVVGPFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEE
RLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETALFKARFEQALDSQKLNIKKIEQELRRKG
INPEDPVAMASIQRVASTFFNAIDKKEGTPYVFHGDKQIVTETKTKTKTNMEEEESNSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRFKKFD
MRTNNNSDNEMDKPRVWRQRDSKQRLYDSEEEDGDHENEEEWDSDDGQNANNSHTDDSDGAYGIVKVTRRARGRHDLAKNKSFERNVEPLEASEPENMLSDLESAMWQSD
EEEEDDTKVSRYANHDYKHNEDDLHSIKRNQNNRLNDYDSSIDEPDDAYDRSKHTDTKQKQDRMSKSKNSYNLVSKDVDSGKAMWDSDDEDESGTSRPQRYDYWSGSKED
DSR