CuGenDBv2

Gene ID	Lsi02G016040
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	tRNA pseudouridine synthase B
Genome location	chr02:21912251..21916648
RNA-Seq Expression	Lsi02G016040
Synteny	Lsi02G016040
Gene Ontology terms	GO:0006400 - tRNA modification (biological process) GO:1990481 - mRNA pseudouridine synthesis (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003723 - RNA binding (molecular function) GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domains	IPR002501 - Pseudouridine synthase II, N-terminal IPR014780 - tRNA pseudouridine synthase II, TruB IPR020103 - Pseudouridine synthase, catalytic domain superfamily IPR032819 - tRNA pseudouridylate synthase B, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008458830.1 PREDICTED: uncharacterized protein LOC103498118 [Cucumis melo]

1.3e-274

88.62

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MAKS ALF+ASHFFIRSTLM SSKSL LFLPLSNLNH HRF+FRNSLS LSLRRF  TSTPFPLQYE+IINRPSYP PPHQN RTPARISSDN  EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDP+SELGF+SWVDRKLIS+S TVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDN+TQDEGFVELKPEVVEFNTLHKREEELFF+DAFAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        M+YQLE KYFPD+GLDKAFLGPGESNVEVNEQTKGR+GVKKAVRVKPET VEV NGM+DKG+VFFDEG+PEKENKGS+ DV EKKVEEFFKCLKK P KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S+IGQ EPYLLTRH ELPA+WDSPCGTVVLLNKPK                    GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIGQ+LADDAWEFKELEDAITKGYF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_011655389.2 uncharacterized protein LOC101215528 isoform X1 [Cucumis sativus]

3.9e-271

87.71

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Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MAKS ALF+ASHFFIRSTLM SSKSL+LFLPLSNLNHLHRF+FRNSLS LSLR FSTT T FPLQYE+IINRPSYP PPHQN RTPAR+SSDNS EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDPTSELGF+SWVDRKLIS+  TVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDN+TQ EGFVELKPEVVEFNTLHKREEELFF+DAFAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        M+YQLE KYFPD+GLDKAFLGPGESNVEVNEQTKGR+GV+KA RVKPE  VEV NGM+DK +VFFDEG+PEKENKGS+ DV+EKKVEEFFKCLKK P KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S IGQ EPYLLTRH ELPAKWDSPCGTVVLLNKPK                    GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_022993331.1 uncharacterized protein LOC111489372 [Cucurbita maxima]

4.3e-270

87.71

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MA S AL +ASHFFIRSTLMASSKSL  F PLSNLNHLHRF   NSLS LSLRR STTSTPFPLQY+MIIN P YPP P QNRRTP RISSDNS EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDP SELGFESWVD+KLIS+SE+ SGKEGVVMDKA RKYYNKRR+RMYGSDSDED KTQDEGFVELKPEVVEFNTLHKREEELFFYD FAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        MVYQLE KYFPDEGLDKAFLGPGESNVEVNEQTKGRKGV+KAV VKPETKVEV NG+++KGLVFFD GRPEK+NKGS+KDV EKKVEEFFKCLKKVP KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        SEIGQTEPYLLTRHTELPAKWDSPCGTVVL+NKPK                    GHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADS VIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGKVLGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_023550635.1 uncharacterized protein LOC111808717 [Cucurbita pepo subsp. pepo]

1.8e-268

87.16

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Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MA S AL +ASHFFIRSTLMASSKSL  F PLSNLNHLHRF   NSLS LSLRR STTSTPFPLQY+MI+NRP YPP P QNRRTP RIS DNS EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDP SELGFESWVD+KLIS+SE+ SGKEGVVMDKA RKYYNKRRKRMYGSDSDED KTQDEGFVELKPEVVEFNTLHKREEELFFYD FAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        MVYQLE KYFPDEGLDKAFLGPGESNVEVNEQTKGRKGV+KAV VKPETK+EV NG++ KGLVFFD GRPEK+NKGS KDV EKKVEEFFKCLKKVP KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        SEIGQTEPYLLTRHTELPAKWDSPCGTVVL+NKPK                    GHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADS VIQREPWEHIKDDDIKKA ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

XP_038891059.1 uncharacterized protein LOC120080471 [Benincasa hispida]

7.3e-278

89.54

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        M KSSALF+AS+FFIRST M SS +LTLFL  SNLNHLHRF+FRNSLS LS RR STTSTPFPLQYEMIINRPSYPPPPHQNRRTP RI SDNS E DSS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDPTSE+GFESWVDRKLIS+SET+SGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        MVYQLE KYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKK V V+PE KV+V +GM+DKGLVFFDEG+PE ENKGS+KDV EKKVEEFFKCLKKVP KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        SEIG TEPYLLTRHTELPAKWDSPCGTVVLLNKPK                    GHAGTLDPMATGLLIVCVGKATKLV+RYQGMIKSYSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKD DIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KP03 Uncharacterized protein

1.9e-271

87.71

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MAKS ALF+ASHFFIRSTLM SSKSL+LFLPLSNLNHLHRF+FRNSLS LSLR FSTT T FPLQYE+IINRPSYP PPHQN RTPAR+SSDNS EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDPTSELGF+SWVDRKLIS+  TVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDN+TQ EGFVELKPEVVEFNTLHKREEELFF+DAFAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        M+YQLE KYFPD+GLDKAFLGPGESNVEVNEQTKGR+GV+KA RVKPE  VEV NGM+DK +VFFDEG+PEKENKGS+ DV+EKKVEEFFKCLKK P KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S IGQ EPYLLTRH ELPAKWDSPCGTVVLLNKPK                    GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKDDDI+KAAASFCGEIWQVPPMFSAIKVGGE+MYEKARRGESIELSPR+ISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A1S3C8B0 uncharacterized protein LOC103498118

6.3e-275

88.62

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MAKS ALF+ASHFFIRSTLM SSKSL LFLPLSNLNH HRF+FRNSLS LSLRRF  TSTPFPLQYE+IINRPSYP PPHQN RTPARISSDN  EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDP+SELGF+SWVDRKLIS+S TVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDN+TQDEGFVELKPEVVEFNTLHKREEELFF+DAFAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        M+YQLE KYFPD+GLDKAFLGPGESNVEVNEQTKGR+GVKKAVRVKPET VEV NGM+DKG+VFFDEG+PEKENKGS+ DV EKKVEEFFKCLKK P KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S+IGQ EPYLLTRH ELPA+WDSPCGTVVLLNKPK                    GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIGQ+LADDAWEFKELEDAITKGYF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A5A7T7S0 TruB_N domain-containing protein

2.1e-262

88.19

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MAKS ALF+ASHFFIRSTLM SSKSL LFLPLSNLNH HRF+FRNSLS LSLRRF  TSTPFPLQYE+IINRPSYP PPHQN RTPARISSDN  EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDP+SELGF+SWVDRKLIS+S TVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDN+TQDEGFVELKPEVVEFNTLHKREEELFF+DAFAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        M+YQLE KYFPD+GLDKAFLGPGESNVEVNEQTKGR+GVKKAVRVKPET VEV NGM+DKG+VFFDEG+PEKENKGS+ DV EKKVEEFFKCLKK P KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        S+IGQ EPYLLTRH ELPA+WDSPCGTVVLLNKPK                    GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK YSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQY
        CADLGK LGSCAHLTALRRDSIGQ+
Subjt:  CADLGKVLGSCAHLTALRRDSIGQY

A0A6J1FDZ7 uncharacterized protein LOC111444875

7.4e-268

86.97

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MA S AL +ASHFFIRSTLMASSKSL  F PLSNLNHLHRF   NSLS LSLRR STTSTPFPLQY+MII+RP YPP P QNRRTPARIS DNS EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDP SELGFESWVD+KLIS+SE+ SGKEGVVMDKA RKYYNKRRKRMYGSDSDE+ KTQDEGFVELKPEVVEFNTLHKREEELFFYD FAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        MVYQLE KYFPDEGLDKAFLGPGESNVEVNEQTKGRKGV+KAV VKPETKVEV NG+++KGLVFFD GRPEK+NKGS+KDV EKKVEEFFKCLKKVP KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        SEIGQ  PYLLTRHTELPAKWDSPCGTVVL+NKPK                    GHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADS VIQREPWEHIKDDDIKKA ASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGK LGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

A0A6J1JSH8 uncharacterized protein LOC111489372

2.1e-270

87.71

Show/hide

Query:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS
        MA S AL +ASHFFIRSTLMASSKSL  F PLSNLNHLHRF   NSLS LSLRR STTSTPFPLQY+MIIN P YPP P QNRRTP RISSDNS EL+SS
Subjt:  MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSS

Query:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK
        EDP SELGFESWVD+KLIS+SE+ SGKEGVVMDKA RKYYNKRR+RMYGSDSDED KTQDEGFVELKPEVVEFNTLHKREEELFFYD FAYPWEKDKHYK
Subjt:  EDPTSELGFESWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYK

Query:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD
        MVYQLE KYFPDEGLDKAFLGPGESNVEVNEQTKGRKGV+KAV VKPETKVEV NG+++KGLVFFD GRPEK+NKGS+KDV EKKVEEFFKCLKKVP KD
Subjt:  MVYQLENKYFPDEGLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKD

Query:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT
        SEIGQTEPYLLTRHTELPAKWDSPCGTVVL+NKPK                    GHAGTLDPMATGLLIVCVGKATKL DRYQGMIKSYSGVFRLGEAT
Subjt:  SEIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEAT

Query:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL
        STWDADS VIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISI+KFDIERSLDDRQNLIFRVTCSKGTYIRSL
Subjt:  STWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSL

Query:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        CADLGKVLGSCAHLTALRRDSIG+YLADDAWEFKELEDAITK YF
Subjt:  CADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

SwissProt top hits

e value

%identity

Alignment

A0JUU8 tRNA pseudouridine synthase B

4.8e-38

42.86

Show/hide

Query:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA
        GHAGTLDPMATG+L++ + KAT+L+    G  K+Y+   RLGE+T T DA+  V+       + +  I+ A A+  GEI QVP   SAIKV GE+ Y + 
Subjt:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA

Query:  RRGESIELSPRRISIFKFDIERSLDDRQNLIF----RVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAI
        R GE ++L+ R ++I +FD+     +R   +      V CS GTYIR+L  DLG+ LG+  HLTALRR  +G Y  D A   ++L + +
Subjt:  RRGESIELSPRRISIFKFDIERSLDDRQNLIF----RVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAI

A1UET1 tRNA pseudouridine synthase B

4.8e-38

45.41

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Query:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA
        GHAGTLDPMATG+L+V + +ATKL+       KSY    RLG+ T+T DA+  V++  P   I D+ I  A A+  GEI QVP   SAIKVGG++ Y+ A
Subjt:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA

Query:  RRGESIELSPRRISIFKFDI--ERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELED
        R G+++EL+ RR+ I +F++   R +D   ++   V CS GTYIR+L  D+G  LG   HLT LRR  +G++  D+A+    L D
Subjt:  RRGESIELSPRRISIFKFDI--ERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELED

A3PY88 tRNA pseudouridine synthase B

4.8e-38

45.41

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Query:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA
        GHAGTLDPMATG+L+V + +ATKL+       KSY    RLG+ T+T DA+  V++  P   I D+ I  A A+  GEI QVP   SAIKVGG++ Y+ A
Subjt:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA

Query:  RRGESIELSPRRISIFKFDI--ERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELED
        R G+++EL+ RR+ I +F++   R +D   ++   V CS GTYIR+L  D+G  LG   HLT LRR  +G++  D+A+    L D
Subjt:  RRGESIELSPRRISIFKFDI--ERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELED

A6LEL7 tRNA pseudouridine synthase B

1.6e-38

43.72

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Query:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA
        GHAGTLDP+ATG++IVC G+ATK +D +Q   K Y    +LGE T ++D +  +    P EHI  + +++   +F G I Q+PP+FSA KV G++ YE A
Subjt:  GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKA

Query:  RRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELED
        R+GE +EL  + + I + ++     D   +  RV CSKGTYIR+L  D+GK LGS AHL  L R  IG+   D     +E++D
Subjt:  RRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELED

Q9RB36 tRNA pseudouridine synthase B

4.9e-43

45.33

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Query:  PAKWDSPCGT----VVLLNK---PK----GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKA
        P KW S         +L+NK   PK    GHAGTLDP+ATGLL++C GK TK +   QG  K Y+G F +G  T ++D ++ + Q  P EHI +  I + 
Subjt:  PAKWDSPCGT----VVLLNK---PK----GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKA

Query:  AASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYL
           F GEI Q PP+FSAIK  G ++YE AR GESIE+  R+ +I +F+I R       + FRV CSKGTYIRSL  D GK + S +HLT LRR  IG Y 
Subjt:  AASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYL

Query:  ADDAWEFKELEDAI
          +A +    E+++
Subjt:  ADDAWEFKELEDAI

Arabidopsis top hits

e value

%identity

Alignment

AT3G57150.1 homologue of NAP57

1.3e-17

34.5

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Query:  VLLNKPKGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGG
        +L  +  GH+GTLDP  TG LIVC+ +AT+LV   QG  K Y  V RL  A        P + +          + +A  S  G ++Q PP+ SA+K   
Subjt:  VLLNKPKGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGG

Query:  EKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRR
             +  R  +I  S     + ++D +R L     ++F V+C  GTYIR++C  LG +LG   H+  LRR
Subjt:  EKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRR

AT5G14460.1 Pseudouridine synthase family protein

9.2e-170

63.05

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Query:  LMASSKSLTLFLPL--SNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSSEDPTSELGFESWVDRK
        LM+SS  +++  PL  S++    R   +  L+SL L   STTST +PLQY+MIINRP+      QNRR P +        ++S    ++E  F+SWVD K
Subjt:  LMASSKSLTLFLPL--SNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSSEDPTSELGFESWVDRK

Query:  LISDSET-VSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQ--DEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYKMVYQLENKYFPDE
        L  + E    G     MDKA RKYY+KRRKR+YGSDS+++N ++  DEGFVELKPEVVEF+ LH+REEEL+FYD FAYPWEKDKHYKMVYQLE KY+PD+
Subjt:  LISDSET-VSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQ--DEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYKMVYQLENKYFPDE

Query:  GLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPN-GM-----NDKGLVFFDEGRPEKENKGSMKD---VAEKKVEEFFKCLKKVP---GKDS
         LDKAFL PGE   + ++  K R G KK V      + EV   GM     +D  LVFFDE + ++E K S  D   V EKKVE+FFK L K P   G  S
Subjt:  GLDKAFLGPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPN-GM-----NDKGLVFFDEGRPEKENKGSMKD---VAEKKVEEFFKCLKKVP---GKDS

Query:  EIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS
          G  EP+L+TR+ ELP +WD P GTV+L+NKPK                    GHAGTLDPMATGLLIVCVGKATK+VDRYQGMIK YSGVFRLGEATS
Subjt:  EIGQTEPYLLTRHTELPAKWDSPCGTVVLLNKPK--------------------GHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATS

Query:  TWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC
        T DADSPVIQRE WEHIKDDDIKKA  SF GEIWQVPPMFSAIKVGGEKMYEKARRGE++ELSPRRISIF+FDIERSLDDRQNLIFRV CSKGTYIRSLC
Subjt:  TWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLC

Query:  ADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF
        ADL K LGSCAHLTALRRDSIG+Y A+DAWEF ELE AITK YF
Subjt:  ADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAAATCATCTGCTCTGTTTTACGCCTCCCATTTCTTCATCCGCTCTACACTCATGGCTTCTTCCAAATCACTCACTCTCTTCCTTCCACTCTCAAACCTCAACCA
TCTCCACAGGTTTTCCTTTCGCAATTCACTCTCTTCCTTATCGCTCCGCAGATTCTCCACCACTTCAACCCCATTCCCTCTGCAATACGAAATGATCATCAACCGACCGT
CTTATCCTCCCCCGCCCCATCAGAATCGACGAACGCCCGCCAGAATCAGCTCCGACAATTCTTCCGAGCTCGACTCCTCCGAGGATCCCACTTCCGAATTGGGGTTCGAG
AGCTGGGTGGATCGGAAGCTTATATCCGACAGTGAAACTGTGTCCGGTAAGGAAGGCGTGGTCATGGATAAGGCTATGAGGAAATACTATAACAAAAGAAGGAAGAGGAT
GTATGGGTCTGATTCTGATGAAGATAATAAGACACAGGACGAGGGATTCGTGGAATTAAAGCCTGAGGTGGTTGAGTTTAACACATTGCATAAGAGAGAGGAGGAATTGT
TCTTCTATGACGCGTTTGCGTATCCATGGGAGAAAGATAAGCATTACAAAATGGTGTATCAGTTGGAGAATAAATATTTTCCTGATGAAGGTCTTGACAAGGCTTTTCTG
GGACCTGGAGAGTCAAATGTGGAAGTGAATGAACAGACAAAGGGAAGGAAGGGGGTGAAAAAGGCAGTGAGGGTTAAGCCCGAGACGAAAGTGGAGGTCCCCAATGGCAT
GAATGACAAAGGGTTGGTTTTCTTTGATGAGGGGAGACCAGAAAAGGAAAATAAAGGGTCCATGAAAGATGTGGCAGAGAAGAAGGTGGAGGAGTTCTTCAAGTGTTTGA
AGAAAGTTCCTGGTAAAGATTCTGAAATTGGTCAGACGGAGCCATATCTTTTGACGAGGCATACGGAGCTCCCTGCCAAATGGGATAGTCCTTGTGGGACAGTGGTTTTG
CTGAACAAACCTAAAGGTCATGCAGGTACTCTTGATCCTATGGCTACTGGTTTGTTGATAGTGTGCGTTGGAAAAGCGACAAAGTTGGTAGACAGATATCAAGGTATGAT
TAAGAGCTACAGTGGAGTTTTCCGTTTAGGAGAGGCTACTTCAACTTGGGATGCTGATTCACCGGTAATTCAGCGAGAGCCTTGGGAGCACATCAAAGATGATGACATCA
AAAAAGCTGCTGCCTCTTTTTGTGGGGAAATTTGGCAAGTTCCTCCCATGTTTTCTGCCATTAAAGTCGGAGGTGAGAAGATGTATGAGAAAGCAAGAAGGGGAGAAAGT
ATTGAGCTTTCTCCGAGACGGATATCAATTTTCAAATTTGATATTGAACGTAGTTTAGATGACAGGCAAAATTTGATTTTTCGAGTTACATGCTCTAAAGGAACATACAT
TCGGTCACTTTGTGCAGATCTTGGGAAGGTTCTTGGCAGTTGTGCCCATCTAACTGCTCTTCGAAGGGATTCAATAGGGCAATATCTAGCAGATGATGCCTGGGAATTCA
AAGAGTTGGAAGATGCAATTACCAAAGGTTATTTTTAG

mRNA sequence

Show/hide mRNA sequence

CAAACATTCACACACCGCCCAGCCCACCAAAAATGTTGAGAGTCTCACGAACTCCCTCAGCCATCTAACACTGCTTCACTTCAATGGCGAAATCATCTGCTCTGTTTTAC
GCCTCCCATTTCTTCATCCGCTCTACACTCATGGCTTCTTCCAAATCACTCACTCTCTTCCTTCCACTCTCAAACCTCAACCATCTCCACAGGTTTTCCTTTCGCAATTC
ACTCTCTTCCTTATCGCTCCGCAGATTCTCCACCACTTCAACCCCATTCCCTCTGCAATACGAAATGATCATCAACCGACCGTCTTATCCTCCCCCGCCCCATCAGAATC
GACGAACGCCCGCCAGAATCAGCTCCGACAATTCTTCCGAGCTCGACTCCTCCGAGGATCCCACTTCCGAATTGGGGTTCGAGAGCTGGGTGGATCGGAAGCTTATATCC
GACAGTGAAACTGTGTCCGGTAAGGAAGGCGTGGTCATGGATAAGGCTATGAGGAAATACTATAACAAAAGAAGGAAGAGGATGTATGGGTCTGATTCTGATGAAGATAA
TAAGACACAGGACGAGGGATTCGTGGAATTAAAGCCTGAGGTGGTTGAGTTTAACACATTGCATAAGAGAGAGGAGGAATTGTTCTTCTATGACGCGTTTGCGTATCCAT
GGGAGAAAGATAAGCATTACAAAATGGTGTATCAGTTGGAGAATAAATATTTTCCTGATGAAGGTCTTGACAAGGCTTTTCTGGGACCTGGAGAGTCAAATGTGGAAGTG
AATGAACAGACAAAGGGAAGGAAGGGGGTGAAAAAGGCAGTGAGGGTTAAGCCCGAGACGAAAGTGGAGGTCCCCAATGGCATGAATGACAAAGGGTTGGTTTTCTTTGA
TGAGGGGAGACCAGAAAAGGAAAATAAAGGGTCCATGAAAGATGTGGCAGAGAAGAAGGTGGAGGAGTTCTTCAAGTGTTTGAAGAAAGTTCCTGGTAAAGATTCTGAAA
TTGGTCAGACGGAGCCATATCTTTTGACGAGGCATACGGAGCTCCCTGCCAAATGGGATAGTCCTTGTGGGACAGTGGTTTTGCTGAACAAACCTAAAGGTCATGCAGGT
ACTCTTGATCCTATGGCTACTGGTTTGTTGATAGTGTGCGTTGGAAAAGCGACAAAGTTGGTAGACAGATATCAAGGTATGATTAAGAGCTACAGTGGAGTTTTCCGTTT
AGGAGAGGCTACTTCAACTTGGGATGCTGATTCACCGGTAATTCAGCGAGAGCCTTGGGAGCACATCAAAGATGATGACATCAAAAAAGCTGCTGCCTCTTTTTGTGGGG
AAATTTGGCAAGTTCCTCCCATGTTTTCTGCCATTAAAGTCGGAGGTGAGAAGATGTATGAGAAAGCAAGAAGGGGAGAAAGTATTGAGCTTTCTCCGAGACGGATATCA
ATTTTCAAATTTGATATTGAACGTAGTTTAGATGACAGGCAAAATTTGATTTTTCGAGTTACATGCTCTAAAGGAACATACATTCGGTCACTTTGTGCAGATCTTGGGAA
GGTTCTTGGCAGTTGTGCCCATCTAACTGCTCTTCGAAGGGATTCAATAGGGCAATATCTAGCAGATGATGCCTGGGAATTCAAAGAGTTGGAAGATGCAATTACCAAAG
GTTATTTTTAG

Protein sequence

Show/hide protein sequence

MAKSSALFYASHFFIRSTLMASSKSLTLFLPLSNLNHLHRFSFRNSLSSLSLRRFSTTSTPFPLQYEMIINRPSYPPPPHQNRRTPARISSDNSSELDSSEDPTSELGFE
SWVDRKLISDSETVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNKTQDEGFVELKPEVVEFNTLHKREEELFFYDAFAYPWEKDKHYKMVYQLENKYFPDEGLDKAFL
GPGESNVEVNEQTKGRKGVKKAVRVKPETKVEVPNGMNDKGLVFFDEGRPEKENKGSMKDVAEKKVEEFFKCLKKVPGKDSEIGQTEPYLLTRHTELPAKWDSPCGTVVL
LNKPKGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGES
IELSPRRISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKVLGSCAHLTALRRDSIGQYLADDAWEFKELEDAITKGYF

Lsi02G016040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome